RNA–Protein interactions for RNA: ENST00000478913.1

CCDC171-207, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-207ENST00000478913 SLC6A14Q9UN76 642 aa8.61□□□□□ -1.03
CCDC171-207ENST00000478913 PNMA6FA0A0J9YX94 578 aa8.6□□□□□ -1.03
CCDC171-207ENST00000478913 ZBTB42B2RXF5 422 aa8.6□□□□□ -1.03
CCDC171-207ENST00000478913 OIP5O43482 229 aa8.6□□□□□ -1.03
CCDC171-207ENST00000478913 P4HBP07237 508 aaKnown RBP8.6□□□□□ -1.03
CCDC171-207ENST00000478913 LYPD4Q6UWN0 246 aa8.6□□□□□ -1.03
CCDC171-207ENST00000478913 C1orf229Q6ZS94 237 aaPredicted RBP8.6□□□□□ -1.03
CCDC171-207ENST00000478913 SVOPQ8N4V2 548 aa8.6□□□□□ -1.03
CCDC171-207ENST00000478913 SPACA7Q96KW9 195 aa8.6□□□□□ -1.03
CCDC171-207ENST00000478913 EIF2AK2P19525 551 aaKnown RBP8.59□□□□□ -1.03
CCDC171-207ENST00000478913 COL19A1Q14993 1142 aa8.59□□□□□ -1.03
CCDC171-207ENST00000478913 HFE2Q6ZVN8 426 aa8.59□□□□□ -1.03
CCDC171-207ENST00000478913 FAM35AQ86V20 835 aa8.59□□□□□ -1.03
CCDC171-207ENST00000478913 NCAPG2Q86XI2 1143 aa8.59□□□□□ -1.03
CCDC171-207ENST00000478913 PSMG3-AS1Q96PY0 264 aa8.59□□□□□ -1.03
CCDC171-207ENST00000478913 MDFIQ99750 246 aa8.59□□□□□ -1.03
CCDC171-207ENST00000478913 RBSNQ9H1K0 784 aa8.59□□□□□ -1.03
CCDC171-207ENST00000478913 LRRC4BQ9NT99 713 aa8.59□□□□□ -1.03
CCDC171-207ENST00000478913 LOC102724428A0A0B4J2F2 783 aa8.58□□□□□ -1.04
CCDC171-207ENST00000478913 KIF4AO95239 1232 aa8.58□□□□□ -1.04
CCDC171-207ENST00000478913 GHRHP01286 108 aa8.58□□□□□ -1.04
CCDC171-207ENST00000478913 CPB1P15086 417 aa8.58□□□□□ -1.04
CCDC171-207ENST00000478913 SIK1P57059 783 aa8.58□□□□□ -1.04
CCDC171-207ENST00000478913 ATP2B2Q01814 1243 aa8.58□□□□□ -1.04
CCDC171-207ENST00000478913 ENOX2Q16206 610 aaKnown RBP8.58□□□□□ -1.04
CCDC171-207ENST00000478913 EAPPQ56P03 285 aaPredicted RBP8.58□□□□□ -1.04
CCDC171-207ENST00000478913 COL13A1Q5TAT6 717 aaPredicted RBP8.58□□□□□ -1.04
CCDC171-207ENST00000478913 USPL1Q5W0Q7 1092 aa8.58□□□□□ -1.04
CCDC171-207ENST00000478913 SALL4Q9UJQ4 1053 aa8.58□□□□□ -1.04
CCDC171-207ENST00000478913 J3QW42 95 aa8.57□□□□□ -1.04
CCDC171-207ENST00000478913 POLR3DP05423 398 aaPredicted RBP8.57□□□□□ -1.04
CCDC171-207ENST00000478913 EDN3P14138 238 aa8.57□□□□□ -1.04
CCDC171-207ENST00000478913 AMPD1P23109 780 aa8.57□□□□□ -1.04
CCDC171-207ENST00000478913 ENAMQ9NRM1 1142 aa8.57□□□□□ -1.04
CCDC171-207ENST00000478913 NAGPAQ9UK23 515 aa8.57□□□□□ -1.04
CCDC171-207ENST00000478913 TDRD9Q8NDG6 1382 aaKnown RBP8.57□□□□□ -1.04
CCDC171-207ENST00000478913 MAPKBP1O60336 1514 aa8.56□□□□□ -1.04
CCDC171-207ENST00000478913 SHISA8B8ZZ34 492 aa8.56□□□□□ -1.04
CCDC171-207ENST00000478913 CHSY3Q70JA7 882 aa8.56□□□□□ -1.04
CCDC171-207ENST00000478913 KRTAP1-3Q8IUG1 177 aa8.56□□□□□ -1.04
CCDC171-207ENST00000478913 GALNT12Q8IXK2 581 aa8.56□□□□□ -1.04
CCDC171-207ENST00000478913 CCDC74AQ96AQ1 378 aa8.56□□□□□ -1.04
CCDC171-207ENST00000478913 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.56□□□□□ -1.04
CCDC171-207ENST00000478913 LDHBP07195 334 aaKnown RBP8.55□□□□□ -1.04
CCDC171-207ENST00000478913 PERM1Q5SV97 790 aa8.55□□□□□ -1.04
CCDC171-207ENST00000478913 PSAPL1Q6NUJ1 521 aa8.55□□□□□ -1.04
CCDC171-207ENST00000478913 KANK3Q6NY19 840 aa8.55□□□□□ -1.04
CCDC171-207ENST00000478913 ELMSAN1Q6PJG2 1045 aa8.55□□□□□ -1.04
CCDC171-207ENST00000478913 MICALL1Q8N3F8 863 aa8.55□□□□□ -1.04
CCDC171-207ENST00000478913 NEDD1Q8NHV4 660 aa8.55□□□□□ -1.04
CCDC171-207ENST00000478913 NPHS2Q9NP85 383 aa8.55□□□□□ -1.04
CCDC171-207ENST00000478913 PTPRTO14522 1441 aa8.54□□□□□ -1.04
CCDC171-207ENST00000478913 FGD1P98174 961 aa8.54□□□□□ -1.04
CCDC171-207ENST00000478913 ALG1LQ6GMV1 187 aa8.54□□□□□ -1.04
CCDC171-207ENST00000478913 FBF1Q8TES7 1133 aa8.54□□□□□ -1.04
CCDC171-207ENST00000478913 PLD4Q96BZ4 506 aa8.54□□□□□ -1.04
CCDC171-207ENST00000478913 BTBD6Q96KE9 485 aa8.54□□□□□ -1.04
CCDC171-207ENST00000478913 LPIN3Q9BQK8 851 aa8.54□□□□□ -1.04
CCDC171-207ENST00000478913 BCL2L13Q9BXK5 485 aa8.54□□□□□ -1.04
CCDC171-207ENST00000478913 WWC3Q9ULE0 1092 aa8.54□□□□□ -1.04
CCDC171-207ENST00000478913 LTBP4Q8N2S1 1624 aa8.54□□□□□ -1.04
CCDC171-207ENST00000478913 RGS9O75916 674 aaPredicted RBP8.53□□□□□ -1.04
CCDC171-207ENST00000478913 PLA2G4EQ3MJ16 856 aa8.53□□□□□ -1.04
CCDC171-207ENST00000478913 FBXO33Q7Z6M2 555 aa8.53□□□□□ -1.04
CCDC171-207ENST00000478913 CEP120Q8N960 986 aa8.53□□□□□ -1.04
CCDC171-207ENST00000478913 RGS22Q8NE09 1264 aa8.53□□□□□ -1.04
CCDC171-207ENST00000478913 NUDT8Q8WV74 236 aa8.53□□□□□ -1.04
CCDC171-207ENST00000478913 SETDB2Q96T68 719 aa8.53□□□□□ -1.04
CCDC171-207ENST00000478913 SMG9Q9H0W8 520 aaKnown RBP8.53□□□□□ -1.04
CCDC171-207ENST00000478913 LATS2Q9NRM7 1088 aa8.53□□□□□ -1.04
CCDC171-207ENST00000478913 NLRP2Q9NX02 1062 aa8.53□□□□□ -1.04
CCDC171-207ENST00000478913 FRRS1LQ9P0K9 344 aa8.53□□□□□ -1.04
CCDC171-207ENST00000478913 PRPF40AO75400 957 aaKnown RBP8.52□□□□□ -1.05
CCDC171-207ENST00000478913 ALBP02768 609 aa8.52□□□□□ -1.05
CCDC171-207ENST00000478913 ACPPP15309 386 aa8.52□□□□□ -1.05
CCDC171-207ENST00000478913 ATP11AP98196 1134 aa8.52□□□□□ -1.05
CCDC171-207ENST00000478913 GIPC2Q8TF65 315 aa8.52□□□□□ -1.05
CCDC171-207ENST00000478913 OSMRQ99650 979 aa8.52□□□□□ -1.05
CCDC171-207ENST00000478913 SPOCK3Q9BQ16 436 aa8.52□□□□□ -1.05
CCDC171-207ENST00000478913 RASSF4Q9H2L5 321 aa8.52□□□□□ -1.05
CCDC171-207ENST00000478913 RRAGCQ9HB90 399 aa8.52□□□□□ -1.05
CCDC171-207ENST00000478913 JPH1Q9HDC5 661 aaPredicted RBP8.52□□□□□ -1.05
CCDC171-207ENST00000478913 STARD13Q9Y3M8 1113 aa8.52□□□□□ -1.05
CCDC171-207ENST00000478913 DCAF1Q9Y4B6 1507 aa8.51□□□□□ -1.05
CCDC171-207ENST00000478913 M0R082 166 aa8.51□□□□□ -1.05
CCDC171-207ENST00000478913 GADD45BO75293 160 aaPredicted RBP8.51□□□□□ -1.05
CCDC171-207ENST00000478913 SMNDC1O75940 238 aaKnown RBP eCLIP8.51□□□□□ -1.05
CCDC171-207ENST00000478913 PEAR1Q5VY43 1037 aaPredicted RBP8.51□□□□□ -1.05
CCDC171-207ENST00000478913 CEP135Q66GS9 1140 aa8.51□□□□□ -1.05
CCDC171-207ENST00000478913 ZNF417Q8TAU3 575 aa8.51□□□□□ -1.05
CCDC171-207ENST00000478913 EPS8L3Q8TE67 593 aaKnown RBP8.51□□□□□ -1.05
CCDC171-207ENST00000478913 ZNF587Q96SQ5 575 aaPredicted RBP8.51□□□□□ -1.05
CCDC171-207ENST00000478913 ZKSCAN3Q9BRR0 538 aa8.51□□□□□ -1.05
CCDC171-207ENST00000478913 PBX4Q9BYU1 374 aa8.51□□□□□ -1.05
CCDC171-207ENST00000478913 DZANK1Q9NVP4 752 aa8.51□□□□□ -1.05
CCDC171-207ENST00000478913 YEATS2Q9ULM3 1422 aa8.51□□□□□ -1.05
CCDC171-207ENST00000478913 A0A1W2PP55 124 aa8.5□□□□□ -1.05
CCDC171-207ENST00000478913 LILRB5O75023 590 aa8.5□□□□□ -1.05
CCDC171-207ENST00000478913 TRPA1O75762 1119 aa8.5□□□□□ -1.05
CCDC171-207ENST00000478913 PROCP04070 461 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms