RNA–Protein interactions for RNA: ENST00000478776.1

VLDLR-204, Transcript of very low density lipoprotein receptor, humanhuman

TSL 3

Gene VLDLR, Length 510 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-204ENST00000478776 CYP2E1P05181 493 aaPredicted RBP6.93□□□□□ -1.3
VLDLR-204ENST00000478776 PCSK2P16519 638 aa6.93□□□□□ -1.3
VLDLR-204ENST00000478776 LCE3BQ5TA77 95 aa6.93□□□□□ -1.3
VLDLR-204ENST00000478776 PDE12Q6L8Q7 609 aaKnown RBP6.93□□□□□ -1.3
VLDLR-204ENST00000478776 INTS5Q6P9B9 1019 aaKnown RBP6.93□□□□□ -1.3
VLDLR-204ENST00000478776 ARMC10Q8N2F6 343 aa6.93□□□□□ -1.3
VLDLR-204ENST00000478776 KCNF1Q9H3M0 494 aa6.93□□□□□ -1.3
VLDLR-204ENST00000478776 COL17A1Q9UMD9 1497 aaPredicted RBP6.92□□□□□ -1.3
VLDLR-204ENST00000478776 DDX3YO15523 660 aaKnown RBP6.92□□□□□ -1.3
VLDLR-204ENST00000478776 ATG7O95352 703 aa6.92□□□□□ -1.3
VLDLR-204ENST00000478776 EPHA1P21709 976 aa6.92□□□□□ -1.3
VLDLR-204ENST00000478776 TXKP42681 527 aa6.92□□□□□ -1.3
VLDLR-204ENST00000478776 TMEM164Q5U3C3 297 aa6.92□□□□□ -1.3
VLDLR-204ENST00000478776 RNF43Q68DV7 783 aa6.92□□□□□ -1.3
VLDLR-204ENST00000478776 KIAA1211Q6ZU35 1233 aa6.92□□□□□ -1.3
VLDLR-204ENST00000478776 TRIM42Q8IWZ5 723 aa6.92□□□□□ -1.3
VLDLR-204ENST00000478776 CEP120Q8N960 986 aa6.92□□□□□ -1.3
VLDLR-204ENST00000478776 NUDT16Q96DE0 195 aaKnown RBP6.92□□□□□ -1.3
VLDLR-204ENST00000478776 FAM46AQ96IP4 442 aaKnown RBP6.92□□□□□ -1.3
VLDLR-204ENST00000478776 KRTAP4-12Q9BQ66 201 aa6.92□□□□□ -1.3
VLDLR-204ENST00000478776 C7orf69Q9H7B7 122 aa6.92□□□□□ -1.3
VLDLR-204ENST00000478776 GOLGA2P5Q9HBQ8 144 aa6.92□□□□□ -1.3
VLDLR-204ENST00000478776 HMX2A2RU54 273 aa6.91□□□□□ -1.3
VLDLR-204ENST00000478776 H3BRJ5 948 aa6.91□□□□□ -1.3
VLDLR-204ENST00000478776 ZBTB39O15060 712 aa6.91□□□□□ -1.3
VLDLR-204ENST00000478776 ARL4DP49703 201 aa6.91□□□□□ -1.3
VLDLR-204ENST00000478776 ANKRD34AQ69YU3 496 aa6.91□□□□□ -1.3
VLDLR-204ENST00000478776 CLEC10AQ8IUN9 316 aa6.91□□□□□ -1.3
VLDLR-204ENST00000478776 UBASH3BQ8TF42 649 aa6.91□□□□□ -1.3
VLDLR-204ENST00000478776 CLP1Q92989 425 aaKnown RBP6.91□□□□□ -1.3
VLDLR-204ENST00000478776 KLHDC7BQ96G42 594 aa6.91□□□□□ -1.3
VLDLR-204ENST00000478776 MYRFLQ96LU7 910 aa6.91□□□□□ -1.3
VLDLR-204ENST00000478776 POP1Q99575 1024 aaKnown RBP6.91□□□□□ -1.3
VLDLR-204ENST00000478776 DBNDD2Q9BQY9 259 aa6.91□□□□□ -1.3
VLDLR-204ENST00000478776 KANSL3Q9P2N6 904 aa6.91□□□□□ -1.3
VLDLR-204ENST00000478776 MED26O95402 600 aa6.9□□□□□ -1.3
VLDLR-204ENST00000478776 CES1P23141 567 aa6.9□□□□□ -1.3
VLDLR-204ENST00000478776 GP2P55259 537 aaKnown RBP6.9□□□□□ -1.3
VLDLR-204ENST00000478776 PIP4K2BP78356 416 aa6.9□□□□□ -1.3
VLDLR-204ENST00000478776 FDX2Q6P4F2 183 aa6.9□□□□□ -1.3
VLDLR-204ENST00000478776 ZDHHC13Q8IUH4 622 aa6.9□□□□□ -1.3
VLDLR-204ENST00000478776 SLC7A3Q8WY07 619 aa6.9□□□□□ -1.3
VLDLR-204ENST00000478776 WNT8BQ93098 351 aa6.9□□□□□ -1.3
VLDLR-204ENST00000478776 ADAM19Q9H013 955 aa6.9□□□□□ -1.3
VLDLR-204ENST00000478776 OSGEPQ9NPF4 335 aa6.9□□□□□ -1.3
VLDLR-204ENST00000478776 TMEM63CQ9P1W3 806 aa6.9□□□□□ -1.3
VLDLR-204ENST00000478776 BTBD11A6QL63 1104 aa6.89□□□□□ -1.31
VLDLR-204ENST00000478776 KIAA1324LA8MWY0 1029 aaPredicted RBP6.89□□□□□ -1.31
VLDLR-204ENST00000478776 GAS2O43903 313 aaKnown RBP6.89□□□□□ -1.31
VLDLR-204ENST00000478776 BMP3P12645 472 aa6.89□□□□□ -1.31
VLDLR-204ENST00000478776 ATP2B4P23634 1241 aa6.89□□□□□ -1.31
VLDLR-204ENST00000478776 NLRP12P59046 1061 aa6.89□□□□□ -1.31
VLDLR-204ENST00000478776 BEND4Q6ZU67 534 aa6.89□□□□□ -1.31
VLDLR-204ENST00000478776 FAM20CQ8IXL6 584 aa6.89□□□□□ -1.31
VLDLR-204ENST00000478776 FOXD4L4Q8WXT5 416 aaPredicted RBP6.89□□□□□ -1.31
VLDLR-204ENST00000478776 PMEPA1Q969W9 287 aa6.89□□□□□ -1.31
VLDLR-204ENST00000478776 RUSC1Q9BVN2 902 aa6.89□□□□□ -1.31
VLDLR-204ENST00000478776 RNF208Q9H0X6 261 aa6.89□□□□□ -1.31
VLDLR-204ENST00000478776 PDE2AO00408 941 aaPredicted RBP6.88□□□□□ -1.31
VLDLR-204ENST00000478776 DNM1Q05193 864 aaKnown RBP6.88□□□□□ -1.31
VLDLR-204ENST00000478776 C8orf34Q49A92 452 aa6.88□□□□□ -1.31
VLDLR-204ENST00000478776 ATCAYQ86WG3 371 aa6.88□□□□□ -1.31
VLDLR-204ENST00000478776 GIMAP7Q8NHV1 300 aa6.88□□□□□ -1.31
VLDLR-204ENST00000478776 FAM83CQ9BQN1 747 aa6.88□□□□□ -1.31
VLDLR-204ENST00000478776 CNTN3Q9P232 1028 aa6.88□□□□□ -1.31
VLDLR-204ENST00000478776 OAS3Q9Y6K5 1087 aaKnown RBP6.88□□□□□ -1.31
VLDLR-204ENST00000478776 ADAM11O75078 769 aa6.87□□□□□ -1.31
VLDLR-204ENST00000478776 TAL1P17542 331 aaPredicted RBP6.87□□□□□ -1.31
VLDLR-204ENST00000478776 SRPK2P78362 688 aaKnown RBP6.87□□□□□ -1.31
VLDLR-204ENST00000478776 ADAMTSL4Q6UY14 1074 aa6.87□□□□□ -1.31
VLDLR-204ENST00000478776 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.87□□□□□ -1.31
VLDLR-204ENST00000478776 EDEM1Q92611 657 aa6.87□□□□□ -1.31
VLDLR-204ENST00000478776 SEPT3Q9UH03 358 aa6.87□□□□□ -1.31
VLDLR-204ENST00000478776 SALL4Q9UJQ4 1053 aa6.87□□□□□ -1.31
VLDLR-204ENST00000478776 WNT11O96014 354 aa6.86□□□□□ -1.31
VLDLR-204ENST00000478776 RXRBP28702 533 aa6.86□□□□□ -1.31
VLDLR-204ENST00000478776 C19orf57Q0VDD7 668 aa6.86□□□□□ -1.31
VLDLR-204ENST00000478776 C1orf127Q8N9H9 656 aa6.86□□□□□ -1.31
VLDLR-204ENST00000478776 SHKBP1Q8TBC3 707 aa6.86□□□□□ -1.31
VLDLR-204ENST00000478776 PBXIP1Q96AQ6 731 aa6.86□□□□□ -1.31
VLDLR-204ENST00000478776 CCDC97Q96F63 343 aaPredicted RBP6.86□□□□□ -1.31
VLDLR-204ENST00000478776 ZMYND15Q9H091 742 aa6.86□□□□□ -1.31
VLDLR-204ENST00000478776 HIF3AQ9Y2N7 669 aa6.86□□□□□ -1.31
VLDLR-204ENST00000478776 WDR64B1ANS9 1081 aa6.85□□□□□ -1.31
VLDLR-204ENST00000478776 TM4SF5O14894 197 aa6.85□□□□□ -1.31
VLDLR-204ENST00000478776 PREPP48147 710 aa6.85□□□□□ -1.31
VLDLR-204ENST00000478776 NOM1Q5C9Z4 860 aaKnown RBP6.85□□□□□ -1.31
VLDLR-204ENST00000478776 NUTM2GQ5VZR2 741 aa6.85□□□□□ -1.31
VLDLR-204ENST00000478776 XKR5Q6UX68 686 aa6.85□□□□□ -1.31
VLDLR-204ENST00000478776 ATG3Q9NT62 314 aa6.85□□□□□ -1.31
VLDLR-204ENST00000478776 DZANK1Q9NVP4 752 aa6.85□□□□□ -1.31
VLDLR-204ENST00000478776 PRR19A6NJB7 356 aa6.84□□□□□ -1.31
VLDLR-204ENST00000478776 ACPPP15309 386 aa6.84□□□□□ -1.31
VLDLR-204ENST00000478776 SPINK2P20155 84 aa6.84□□□□□ -1.31
VLDLR-204ENST00000478776 AAMPQ13685 434 aa6.84□□□□□ -1.31
VLDLR-204ENST00000478776 C12orf50Q8NA57 414 aaPredicted RBP6.84□□□□□ -1.31
VLDLR-204ENST00000478776 HELQQ8TDG4 1101 aa6.84□□□□□ -1.31
VLDLR-204ENST00000478776 TRPA1O75762 1119 aa6.83□□□□□ -1.32
VLDLR-204ENST00000478776 MAP4P27816 1152 aaKnown RBP6.83□□□□□ -1.32
VLDLR-204ENST00000478776 MZF1P28698 734 aaPredicted RBP6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms