RNA–Protein interactions for RNA: ENST00000478282.1

U2AF1-210, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 2

Gene U2AF1, Length 3,344 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-210ENST00000478282 ANO10Q9NW15 660 aa17.41■□□□□ 0.38
U2AF1-210ENST00000478282 TRMT1Q9NXH9 659 aaKnown RBP17.41■□□□□ 0.38
U2AF1-210ENST00000478282 GRM8O00222 908 aa17.41■□□□□ 0.38
U2AF1-210ENST00000478282 HSP90B1P14625 803 aaKnown RBP17.41■□□□□ 0.38
U2AF1-210ENST00000478282 TEFQ10587 303 aa17.41■□□□□ 0.38
U2AF1-210ENST00000478282 CCDC73Q6ZRK6 1079 aa17.41■□□□□ 0.38
U2AF1-210ENST00000478282 Q6ZUG5 572 aa17.41■□□□□ 0.38
U2AF1-210ENST00000478282 SCN11AQ9UI33 1791 aa17.41■□□□□ 0.38
U2AF1-210ENST00000478282 SMARCC2Q8TAQ2 1214 aa17.4■□□□□ 0.38
U2AF1-210ENST00000478282 UTYO14607 1347 aa17.4■□□□□ 0.38
U2AF1-210ENST00000478282 GSDMDP57764 484 aa17.4■□□□□ 0.38
U2AF1-210ENST00000478282 SNW1Q13573 536 aaKnown RBP17.4■□□□□ 0.38
U2AF1-210ENST00000478282 MRC1P22897 1456 aa17.4■□□□□ 0.38
U2AF1-210ENST00000478282 KINO60870 393 aaKnown RBP17.39■□□□□ 0.38
U2AF1-210ENST00000478282 PROSER3Q2NL68 480 aa17.39■□□□□ 0.38
U2AF1-210ENST00000478282 COL15A1P39059 1388 aa17.39■□□□□ 0.37
U2AF1-210ENST00000478282 NAA16Q6N069 864 aaPredicted RBP17.39■□□□□ 0.37
U2AF1-210ENST00000478282 LINS1Q8NG48 757 aa17.39■□□□□ 0.37
U2AF1-210ENST00000478282 LLPHQ9BRT6 129 aaKnown RBP17.39■□□□□ 0.37
U2AF1-210ENST00000478282 SCRN1Q12765 414 aa17.39■□□□□ 0.37
U2AF1-210ENST00000478282 CEP57L1Q8IYX8 460 aa17.39■□□□□ 0.37
U2AF1-210ENST00000478282 AMOTQ4VCS5 1084 aa17.38■□□□□ 0.37
U2AF1-210ENST00000478282 ENGASEQ8NFI3 743 aa17.38■□□□□ 0.37
U2AF1-210ENST00000478282 SIL1Q9H173 461 aa17.38■□□□□ 0.37
U2AF1-210ENST00000478282 FAM160A1Q05DH4 1040 aa17.38■□□□□ 0.37
U2AF1-210ENST00000478282 FTOQ9C0B1 505 aaKnown RBP eCLIP17.38■□□□□ 0.37
U2AF1-210ENST00000478282 AOPEPQ8N6M6 819 aa17.37■□□□□ 0.37
U2AF1-210ENST00000478282 OSBPL5Q9H0X9 879 aaPredicted RBP17.37■□□□□ 0.37
U2AF1-210ENST00000478282 A0A087WWV3 80 aa17.37■□□□□ 0.37
U2AF1-210ENST00000478282 EDC3Q96F86 508 aaKnown RBP17.37■□□□□ 0.37
U2AF1-210ENST00000478282 U3KPZ7 1027 aaPredicted RBP17.37■□□□□ 0.37
U2AF1-210ENST00000478282 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.37■□□□□ 0.37
U2AF1-210ENST00000478282 CCDC66A2RUB6 948 aa17.37■□□□□ 0.37
U2AF1-210ENST00000478282 NLRP2Q9NX02 1062 aa17.37■□□□□ 0.37
U2AF1-210ENST00000478282 IMPACTQ9P2X3 320 aa17.37■□□□□ 0.37
U2AF1-210ENST00000478282 THSD7AQ9UPZ6 1657 aa17.36■□□□□ 0.37
U2AF1-210ENST00000478282 PFKFB2O60825 505 aa17.36■□□□□ 0.37
U2AF1-210ENST00000478282 ATL3Q6DD88 541 aa17.36■□□□□ 0.37
U2AF1-210ENST00000478282 NBPF11Q86T75 865 aa17.36■□□□□ 0.37
U2AF1-210ENST00000478282 NSUN7Q8NE18 718 aaKnown RBP17.36■□□□□ 0.37
U2AF1-210ENST00000478282 USP28Q96RU2 1077 aa17.36■□□□□ 0.37
U2AF1-210ENST00000478282 NAT10Q9H0A0 1025 aaKnown RBP17.36■□□□□ 0.37
U2AF1-210ENST00000478282 LAMA4Q16363 1823 aa17.36■□□□□ 0.37
U2AF1-210ENST00000478282 AKAP4Q5JQC9 854 aa17.36■□□□□ 0.37
U2AF1-210ENST00000478282 FBXO41Q8TF61 875 aa17.36■□□□□ 0.37
U2AF1-210ENST00000478282 ZNF396Q96N95 335 aaPredicted RBP17.36■□□□□ 0.37
U2AF1-210ENST00000478282 L2HGDHQ9H9P8 463 aa17.36■□□□□ 0.37
U2AF1-210ENST00000478282 ADAMTS2O95450 1211 aa17.36■□□□□ 0.37
U2AF1-210ENST00000478282 FAM193AP78312 1265 aa17.36■□□□□ 0.37
U2AF1-210ENST00000478282 ZNF446Q9NWS9 450 aa17.36■□□□□ 0.37
U2AF1-210ENST00000478282 SPATA31A1Q5TZJ5 1347 aa17.35■□□□□ 0.37
U2AF1-210ENST00000478282 SPATA31A5Q5VU36 1347 aa17.35■□□□□ 0.37
U2AF1-210ENST00000478282 SPATA31A7Q8IWB4 1347 aa17.35■□□□□ 0.37
U2AF1-210ENST00000478282 RFX7Q2KHR2 1363 aa17.35■□□□□ 0.37
U2AF1-210ENST00000478282 CYP21A2P08686 494 aa17.35■□□□□ 0.37
U2AF1-210ENST00000478282 FSIP1Q8NA03 581 aa17.35■□□□□ 0.37
U2AF1-210ENST00000478282 THRAP3Q9Y2W1 955 aaKnown RBP17.35■□□□□ 0.37
U2AF1-210ENST00000478282 ZNF530Q6P9A1 599 aaPredicted RBP17.35■□□□□ 0.37
U2AF1-210ENST00000478282 ZNF609O15014 1411 aa17.35■□□□□ 0.37
U2AF1-210ENST00000478282 FOSBP53539 338 aa17.34■□□□□ 0.37
U2AF1-210ENST00000478282 PLEKHO1Q53GL0 409 aaPredicted RBP17.34■□□□□ 0.37
U2AF1-210ENST00000478282 MPRIPQ6WCQ1 1025 aa17.34■□□□□ 0.37
U2AF1-210ENST00000478282 LRRC2Q9BYS8 371 aa17.34■□□□□ 0.37
U2AF1-210ENST00000478282 HEG1Q9ULI3 1381 aa17.34■□□□□ 0.37
U2AF1-210ENST00000478282 NUTM2BA6NNL0 878 aaPredicted RBP17.34■□□□□ 0.37
U2AF1-210ENST00000478282 NUTM2EB1AL46 878 aaPredicted RBP17.34■□□□□ 0.37
U2AF1-210ENST00000478282 H2AFXP16104 143 aaPredicted RBP17.34■□□□□ 0.37
U2AF1-210ENST00000478282 ATP5JP18859 108 aa17.34■□□□□ 0.37
U2AF1-210ENST00000478282 E4F1Q66K89 784 aaPredicted RBP17.34■□□□□ 0.37
U2AF1-210ENST00000478282 TOM1L2Q6ZVM7 507 aa17.34■□□□□ 0.37
U2AF1-210ENST00000478282 CREBRFQ8IUR6 639 aa17.34■□□□□ 0.37
U2AF1-210ENST00000478282 NUTM2AQ8IVF1 878 aaPredicted RBP17.34■□□□□ 0.37
U2AF1-210ENST00000478282 KLHDC4Q8TBB5 520 aa17.34■□□□□ 0.37
U2AF1-210ENST00000478282 PTPDC1A2A3K4 754 aa17.34■□□□□ 0.37
U2AF1-210ENST00000478282 CTDNEP1O95476 244 aa17.34■□□□□ 0.37
U2AF1-210ENST00000478282 CSB-PGBD3P0DP91 1061 aa17.34■□□□□ 0.37
U2AF1-210ENST00000478282 FGD1P98174 961 aa17.34■□□□□ 0.37
U2AF1-210ENST00000478282 ME1P48163 572 aa17.33■□□□□ 0.37
U2AF1-210ENST00000478282 CCDC129Q6ZRS4 1044 aa17.33■□□□□ 0.37
U2AF1-210ENST00000478282 CCDC150Q8NCX0 1101 aa17.33■□□□□ 0.37
U2AF1-210ENST00000478282 PPP1R13BQ96KQ4 1090 aa17.33■□□□□ 0.37
U2AF1-210ENST00000478282 ATRNO75882 1429 aa17.33■□□□□ 0.36
U2AF1-210ENST00000478282 DDX58O95786 925 aaKnown RBP17.33■□□□□ 0.36
U2AF1-210ENST00000478282 EVA1CP58658 441 aa17.33■□□□□ 0.36
U2AF1-210ENST00000478282 VPS72Q15906 364 aa17.33■□□□□ 0.36
U2AF1-210ENST00000478282 GLI3P10071 1580 aa17.33■□□□□ 0.36
U2AF1-210ENST00000478282 PSDA5PKW4 1024 aaPredicted RBP17.32■□□□□ 0.36
U2AF1-210ENST00000478282 BMS1Q14692 1282 aaKnown RBP17.32■□□□□ 0.36
U2AF1-210ENST00000478282 TATP17735 454 aaPredicted RBP17.32■□□□□ 0.36
U2AF1-210ENST00000478282 KCNJ6P48051 423 aa17.32■□□□□ 0.36
U2AF1-210ENST00000478282 BARGINQ6ZT62 677 aa17.32■□□□□ 0.36
U2AF1-210ENST00000478282 FMR1NBQ8N0W7 255 aaPredicted RBP17.32■□□□□ 0.36
U2AF1-210ENST00000478282 ERCC4Q92889 916 aaPredicted RBP17.32■□□□□ 0.36
U2AF1-210ENST00000478282 ST7Q9NRC1 585 aa17.32■□□□□ 0.36
U2AF1-210ENST00000478282 TOGARAM1Q9Y4F4 1720 aa17.32■□□□□ 0.36
U2AF1-210ENST00000478282 RNMTO43148 476 aaKnown RBP17.32■□□□□ 0.36
U2AF1-210ENST00000478282 HMGB1P09429 215 aaKnown RBP17.32■□□□□ 0.36
U2AF1-210ENST00000478282 ERCC6LQ2NKX8 1250 aa17.32■□□□□ 0.36
U2AF1-210ENST00000478282 CCDC93Q567U6 631 aa17.32■□□□□ 0.36
U2AF1-210ENST00000478282 STOX1Q6ZVD7 989 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms