RNA–Protein interactions for RNA: ENST00000477626.5

PRPF39-203, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-203ENST00000477626 LDHAL6AQ6ZMR3 332 aa14.71□□□□□ -0.06
PRPF39-203ENST00000477626 ZSWIM6Q9HCJ5 1215 aa14.71□□□□□ -0.06
PRPF39-203ENST00000477626 MINPP1Q9UNW1 487 aa14.71□□□□□ -0.06
PRPF39-203ENST00000477626 NAV1Q8NEY1 1877 aa14.71□□□□□ -0.06
PRPF39-203ENST00000477626 M0R2C6 588 aa14.7□□□□□ -0.06
PRPF39-203ENST00000477626 ATP2B3Q16720 1220 aa14.7□□□□□ -0.06
PRPF39-203ENST00000477626 PI16Q6UXB8 463 aa14.7□□□□□ -0.06
PRPF39-203ENST00000477626 C15orf52Q6ZUT6 534 aaKnown RBP14.7□□□□□ -0.06
PRPF39-203ENST00000477626 CCDC85AQ96PX6 553 aaPredicted RBP14.7□□□□□ -0.06
PRPF39-203ENST00000477626 NYXQ9GZU5 481 aa14.7□□□□□ -0.06
PRPF39-203ENST00000477626 HELLSQ9NRZ9 838 aa14.7□□□□□ -0.06
PRPF39-203ENST00000477626 HOXA10P31260 410 aaPredicted RBP14.7□□□□□ -0.06
PRPF39-203ENST00000477626 CHRNDQ07001 517 aa14.7□□□□□ -0.06
PRPF39-203ENST00000477626 ADCK5Q3MIX3 580 aa14.7□□□□□ -0.06
PRPF39-203ENST00000477626 TRAPPC3LQ5T215 181 aa14.7□□□□□ -0.06
PRPF39-203ENST00000477626 CCDC102BQ68D86 513 aa14.7□□□□□ -0.06
PRPF39-203ENST00000477626 CASC1Q6TDU7 716 aa14.7□□□□□ -0.06
PRPF39-203ENST00000477626 SEC62Q99442 399 aaKnown RBP14.7□□□□□ -0.06
PRPF39-203ENST00000477626 NBPF3Q9H094 633 aa14.7□□□□□ -0.06
PRPF39-203ENST00000477626 CEP126Q9P2H0 1117 aa14.7□□□□□ -0.06
PRPF39-203ENST00000477626 SIPA1L1O43166 1804 aa14.7□□□□□ -0.06
PRPF39-203ENST00000477626 K7ELQ4 463 aaPredicted RBP14.7□□□□□ -0.06
PRPF39-203ENST00000477626 PHKA1P46020 1223 aa14.7□□□□□ -0.06
PRPF39-203ENST00000477626 PIH1D3Q9NQM4 214 aaKnown RBP14.7□□□□□ -0.06
PRPF39-203ENST00000477626 ZMYM6O95789 1325 aa14.69□□□□□ -0.06
PRPF39-203ENST00000477626 SCN9AQ15858 1988 aa14.69□□□□□ -0.06
PRPF39-203ENST00000477626 FBXL16Q8N461 479 aa14.69□□□□□ -0.06
PRPF39-203ENST00000477626 GREB1LQ9C091 1923 aaPredicted RBP14.69□□□□□ -0.06
PRPF39-203ENST00000477626 BAZ2AQ9UIF9 1905 aaKnown RBP14.69□□□□□ -0.06
PRPF39-203ENST00000477626 SNAP23O00161 211 aa14.69□□□□□ -0.06
PRPF39-203ENST00000477626 OSBP2Q969R2 916 aa14.69□□□□□ -0.06
PRPF39-203ENST00000477626 HMG20BQ9P0W2 317 aa14.69□□□□□ -0.06
PRPF39-203ENST00000477626 ZAP70P43403 619 aa14.68□□□□□ -0.06
PRPF39-203ENST00000477626 FBXO33Q7Z6M2 555 aa14.68□□□□□ -0.06
PRPF39-203ENST00000477626 COL23A1Q86Y22 540 aaPredicted RBP14.68□□□□□ -0.06
PRPF39-203ENST00000477626 AGXT2Q9BYV1 514 aa14.68□□□□□ -0.06
PRPF39-203ENST00000477626 SLC27A2O14975 620 aa14.68□□□□□ -0.06
PRPF39-203ENST00000477626 RASGRF1Q13972 1273 aa14.68□□□□□ -0.06
PRPF39-203ENST00000477626 DDX46Q7L014 1031 aaKnown RBP14.68□□□□□ -0.06
PRPF39-203ENST00000477626 MYH2Q9UKX2 1941 aa14.67□□□□□ -0.06
PRPF39-203ENST00000477626 A0A0G2JLW4 131 aa14.67□□□□□ -0.06
PRPF39-203ENST00000477626 VPS53Q5VIR6 699 aa14.67□□□□□ -0.06
PRPF39-203ENST00000477626 STOX1Q6ZVD7 989 aa14.67□□□□□ -0.06
PRPF39-203ENST00000477626 CHMP3Q9Y3E7 222 aa14.67□□□□□ -0.06
PRPF39-203ENST00000477626 KLRK1P26718 216 aa14.67□□□□□ -0.06
PRPF39-203ENST00000477626 ADD2P35612 726 aa14.67□□□□□ -0.06
PRPF39-203ENST00000477626 CREB3L3Q68CJ9 461 aa14.67□□□□□ -0.06
PRPF39-203ENST00000477626 NKX2-3Q8TAU0 364 aa14.67□□□□□ -0.06
PRPF39-203ENST00000477626 DSCC1Q9BVC3 393 aa14.67□□□□□ -0.06
PRPF39-203ENST00000477626 MCMDC2Q4G0Z9 681 aa14.66□□□□□ -0.06
PRPF39-203ENST00000477626 METTL24Q5JXM2 366 aa14.66□□□□□ -0.06
PRPF39-203ENST00000477626 SETDB2Q96T68 719 aa14.66□□□□□ -0.06
PRPF39-203ENST00000477626 ANP32EQ9BTT0 268 aa14.66□□□□□ -0.06
PRPF39-203ENST00000477626 RNF113AO15541 343 aaKnown RBP14.66□□□□□ -0.06
PRPF39-203ENST00000477626 HSP90B1P14625 803 aaKnown RBP14.66□□□□□ -0.06
PRPF39-203ENST00000477626 ZDHHC9Q9Y397 364 aa14.66□□□□□ -0.06
PRPF39-203ENST00000477626 RBM8AQ9Y5S9 174 aaKnown RBP14.66□□□□□ -0.06
PRPF39-203ENST00000477626 GOLIM4O00461 696 aa14.66□□□□□ -0.06
PRPF39-203ENST00000477626 RUFY3Q7L099 469 aa14.66□□□□□ -0.06
PRPF39-203ENST00000477626 ANO8Q9HCE9 1232 aaPredicted RBP14.66□□□□□ -0.06
PRPF39-203ENST00000477626 TACC3Q9Y6A5 838 aa14.66□□□□□ -0.06
PRPF39-203ENST00000477626 CCDC129Q6ZRS4 1044 aa14.65□□□□□ -0.06
PRPF39-203ENST00000477626 ANO2Q9NQ90 1003 aa14.65□□□□□ -0.06
PRPF39-203ENST00000477626 FER1L6Q2WGJ9 1857 aa14.65□□□□□ -0.06
PRPF39-203ENST00000477626 IFIT1P09914 478 aaKnown RBP14.65□□□□□ -0.06
PRPF39-203ENST00000477626 UBE4AQ14139 1066 aa14.65□□□□□ -0.06
PRPF39-203ENST00000477626 ZPR1O75312 459 aa14.65□□□□□ -0.06
PRPF39-203ENST00000477626 FAM84BQ96KN1 310 aaPredicted RBP14.65□□□□□ -0.06
PRPF39-203ENST00000477626 PUS7LQ9H0K6 701 aaKnown RBP14.65□□□□□ -0.06
PRPF39-203ENST00000477626 C10orf71Q711Q0 1435 aa14.64□□□□□ -0.07
PRPF39-203ENST00000477626 RAB3GAP1Q15042 981 aa14.64□□□□□ -0.07
PRPF39-203ENST00000477626 FSD1Q9BTV5 496 aa14.64□□□□□ -0.07
PRPF39-203ENST00000477626 BECN1Q14457 450 aa14.64□□□□□ -0.07
PRPF39-203ENST00000477626 UBE3CQ15386 1083 aa14.64□□□□□ -0.07
PRPF39-203ENST00000477626 PODXL2Q9NZ53 605 aa14.64□□□□□ -0.07
PRPF39-203ENST00000477626 CYP21A2P08686 494 aa14.63□□□□□ -0.07
PRPF39-203ENST00000477626 HSPD1P10809 573 aaKnown RBP14.63□□□□□ -0.07
PRPF39-203ENST00000477626 TOB2Q14106 344 aaPredicted RBP14.63□□□□□ -0.07
PRPF39-203ENST00000477626 RUFY2Q8WXA3 655 aa14.63□□□□□ -0.07
PRPF39-203ENST00000477626 CDC5LQ99459 802 aaKnown RBP14.63□□□□□ -0.07
PRPF39-203ENST00000477626 TCHHQ07283 1943 aa14.63□□□□□ -0.07
PRPF39-203ENST00000477626 SALL1Q9NSC2 1324 aa14.63□□□□□ -0.07
PRPF39-203ENST00000477626 EXOSC10Q01780 885 aaKnown RBP14.63□□□□□ -0.07
PRPF39-203ENST00000477626 TPTE2Q6XPS3 522 aa14.63□□□□□ -0.07
PRPF39-203ENST00000477626 DIAPH3Q9NSV4 1193 aa14.63□□□□□ -0.07
PRPF39-203ENST00000477626 RFC4P35249 363 aa14.63□□□□□ -0.07
PRPF39-203ENST00000477626 GRAPQ13588 217 aa14.63□□□□□ -0.07
PRPF39-203ENST00000477626 ADGRA1Q86SQ6 560 aa14.63□□□□□ -0.07
PRPF39-203ENST00000477626 GRAPLQ8TC17 118 aaPredicted RBP14.63□□□□□ -0.07
PRPF39-203ENST00000477626 EVCP57679 992 aa14.62□□□□□ -0.07
PRPF39-203ENST00000477626 SPATA5Q8NB90 893 aa14.62□□□□□ -0.07
PRPF39-203ENST00000477626 HELBQ8NG08 1087 aaPredicted RBP14.62□□□□□ -0.07
PRPF39-203ENST00000477626 CNNM1Q9NRU3 951 aa14.62□□□□□ -0.07
PRPF39-203ENST00000477626 NBPF5PQ86XG9 351 aaPredicted RBP14.62□□□□□ -0.07
PRPF39-203ENST00000477626 COL4A5P29400 1685 aa14.62□□□□□ -0.07
PRPF39-203ENST00000477626 LARGE1O95461 756 aa14.62□□□□□ -0.07
PRPF39-203ENST00000477626 BCAMP50895 628 aa14.62□□□□□ -0.07
PRPF39-203ENST00000477626 TXNRD3Q86VQ6 643 aa14.62□□□□□ -0.07
PRPF39-203ENST00000477626 TMX3Q96JJ7 454 aa14.62□□□□□ -0.07
PRPF39-203ENST00000477626 NEUROD6Q96NK8 337 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms