RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 N4BP2Q86UW6 1770 aaPredicted RBP14.72□□□□□ -0.05
RTFDC1-207ENST00000477573 HEG1Q9ULI3 1381 aa14.71□□□□□ -0.05
RTFDC1-207ENST00000477573 PKD1L3Q7Z443 1732 aa14.71□□□□□ -0.05
RTFDC1-207ENST00000477573 GIGYF1O75420 1035 aaPredicted RBP14.71□□□□□ -0.05
RTFDC1-207ENST00000477573 SCP2P22307 547 aa14.71□□□□□ -0.05
RTFDC1-207ENST00000477573 TRAF1Q13077 416 aa14.71□□□□□ -0.05
RTFDC1-207ENST00000477573 NYAP1Q6ZVC0 841 aa14.71□□□□□ -0.05
RTFDC1-207ENST00000477573 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.71□□□□□ -0.05
RTFDC1-207ENST00000477573 TEX11Q8IYF3 940 aa14.71□□□□□ -0.05
RTFDC1-207ENST00000477573 MKL1Q969V6 931 aa14.71□□□□□ -0.05
RTFDC1-207ENST00000477573 CHPF2Q9P2E5 772 aa14.71□□□□□ -0.05
RTFDC1-207ENST00000477573 EXOC6BQ9Y2D4 811 aa14.71□□□□□ -0.05
RTFDC1-207ENST00000477573 NRDCO43847 1150 aa14.71□□□□□ -0.05
RTFDC1-207ENST00000477573 PTGS1P23219 599 aa14.71□□□□□ -0.05
RTFDC1-207ENST00000477573 NEDD9Q14511 834 aa14.71□□□□□ -0.05
RTFDC1-207ENST00000477573 L2HGDHQ9H9P8 463 aa14.71□□□□□ -0.05
RTFDC1-207ENST00000477573 ADAM21Q9UKJ8 722 aa14.71□□□□□ -0.05
RTFDC1-207ENST00000477573 ABCA3Q99758 1704 aa14.71□□□□□ -0.06
RTFDC1-207ENST00000477573 LMAN1P49257 510 aa14.7□□□□□ -0.06
RTFDC1-207ENST00000477573 ICA1Q05084 483 aa14.7□□□□□ -0.06
RTFDC1-207ENST00000477573 NAIF1Q69YI7 327 aaPredicted RBP14.7□□□□□ -0.06
RTFDC1-207ENST00000477573 PARP4Q9UKK3 1724 aaKnown RBP14.7□□□□□ -0.06
RTFDC1-207ENST00000477573 KDM6AO15550 1401 aaPredicted RBP14.7□□□□□ -0.06
RTFDC1-207ENST00000477573 TMCO5BA8MYB1 307 aa14.7□□□□□ -0.06
RTFDC1-207ENST00000477573 MX1P20591 662 aa14.7□□□□□ -0.06
RTFDC1-207ENST00000477573 EIF5P55010 431 aaKnown RBP14.7□□□□□ -0.06
RTFDC1-207ENST00000477573 PTPN14Q15678 1187 aa14.7□□□□□ -0.06
RTFDC1-207ENST00000477573 ZNF790Q6PG37 636 aa14.7□□□□□ -0.06
RTFDC1-207ENST00000477573 GBP6Q6ZN66 633 aa14.7□□□□□ -0.06
RTFDC1-207ENST00000477573 RBM42Q9BTD8 480 aaKnown RBP14.7□□□□□ -0.06
RTFDC1-207ENST00000477573 PHAXQ9H814 394 aaKnown RBP14.7□□□□□ -0.06
RTFDC1-207ENST00000477573 COL5A2P05997 1499 aaPredicted RBP14.69□□□□□ -0.06
RTFDC1-207ENST00000477573 NEMFO60524 1076 aa14.69□□□□□ -0.06
RTFDC1-207ENST00000477573 ELF1P32519 619 aa14.69□□□□□ -0.06
RTFDC1-207ENST00000477573 RWDD2BP57060 319 aa14.69□□□□□ -0.06
RTFDC1-207ENST00000477573 EVA1CP58658 441 aa14.69□□□□□ -0.06
RTFDC1-207ENST00000477573 SMC1AQ14683 1233 aaKnown RBP14.69□□□□□ -0.06
RTFDC1-207ENST00000477573 SRCIN1Q9C0H9 1055 aa14.69□□□□□ -0.06
RTFDC1-207ENST00000477573 KCND1Q9NSA2 647 aa14.69□□□□□ -0.06
RTFDC1-207ENST00000477573 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.69□□□□□ -0.06
RTFDC1-207ENST00000477573 NEBLO76041 1014 aa14.68□□□□□ -0.06
RTFDC1-207ENST00000477573 GCFC2P16383 781 aaKnown RBP14.68□□□□□ -0.06
RTFDC1-207ENST00000477573 CRYMQ14894 314 aa14.68□□□□□ -0.06
RTFDC1-207ENST00000477573 KLHL23Q8NBE8 558 aa14.68□□□□□ -0.06
RTFDC1-207ENST00000477573 SPC24Q8NBT2 197 aa14.68□□□□□ -0.06
RTFDC1-207ENST00000477573 HYPKQ9NX55 129 aa14.68□□□□□ -0.06
RTFDC1-207ENST00000477573 CYP27B1O15528 508 aa14.68□□□□□ -0.06
RTFDC1-207ENST00000477573 TUBB4AP04350 444 aa14.68□□□□□ -0.06
RTFDC1-207ENST00000477573 C1QTNF12Q5T7M4 302 aa14.68□□□□□ -0.06
RTFDC1-207ENST00000477573 TTC19Q6DKK2 380 aaPredicted RBP14.68□□□□□ -0.06
RTFDC1-207ENST00000477573 ZSCAN25Q6NSZ9 544 aa14.68□□□□□ -0.06
RTFDC1-207ENST00000477573 TTC5Q8N0Z6 440 aa14.68□□□□□ -0.06
RTFDC1-207ENST00000477573 TMEM87AQ8NBN3 555 aa14.68□□□□□ -0.06
RTFDC1-207ENST00000477573 SUDS3Q9H7L9 328 aaPredicted RBP14.68□□□□□ -0.06
RTFDC1-207ENST00000477573 VEZTQ9HBM0 779 aa14.68□□□□□ -0.06
RTFDC1-207ENST00000477573 PCDH11XQ9BZA7 1347 aa14.68□□□□□ -0.06
RTFDC1-207ENST00000477573 PCDH11YQ9BZA8 1340 aa14.68□□□□□ -0.06
RTFDC1-207ENST00000477573 MRC1P22897 1456 aa14.67□□□□□ -0.06
RTFDC1-207ENST00000477573 BRD1O95696 1058 aa14.67□□□□□ -0.06
RTFDC1-207ENST00000477573 UBTFL1P0CB47 393 aaPredicted RBP14.67□□□□□ -0.06
RTFDC1-207ENST00000477573 WWC2Q6AWC2 1192 aa14.67□□□□□ -0.06
RTFDC1-207ENST00000477573 TTLL5Q6EMB2 1281 aa14.67□□□□□ -0.06
RTFDC1-207ENST00000477573 CCDC26Q8TAB7 109 aa14.67□□□□□ -0.06
RTFDC1-207ENST00000477573 ZCRB1Q8TBF4 217 aaKnown RBP14.67□□□□□ -0.06
RTFDC1-207ENST00000477573 UTP14AQ9BVJ6 771 aaKnown RBP14.67□□□□□ -0.06
RTFDC1-207ENST00000477573 TRIM6Q9C030 488 aaPredicted RBP14.67□□□□□ -0.06
RTFDC1-207ENST00000477573 ANAPC4Q9UJX5 808 aa14.67□□□□□ -0.06
RTFDC1-207ENST00000477573 ST18O60284 1047 aa14.67□□□□□ -0.06
RTFDC1-207ENST00000477573 GRIK3Q13003 919 aa14.67□□□□□ -0.06
RTFDC1-207ENST00000477573 TSHZ1Q6ZSZ6 1077 aa14.67□□□□□ -0.06
RTFDC1-207ENST00000477573 FUCA2Q9BTY2 467 aa14.67□□□□□ -0.06
RTFDC1-207ENST00000477573 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.67□□□□□ -0.064e-6■■■■■ 47
RTFDC1-207ENST00000477573 DDX58O95786 925 aaKnown RBP14.66□□□□□ -0.06
RTFDC1-207ENST00000477573 IL2RBP14784 551 aa14.66□□□□□ -0.06
RTFDC1-207ENST00000477573 CABP4P57796 275 aa14.66□□□□□ -0.06
RTFDC1-207ENST00000477573 PI4KAP2A4QPH2 592 aa14.66□□□□□ -0.06
RTFDC1-207ENST00000477573 AP5Z1O43299 807 aa14.66□□□□□ -0.06
RTFDC1-207ENST00000477573 ERCC6LQ2NKX8 1250 aa14.66□□□□□ -0.06
RTFDC1-207ENST00000477573 PI4KAP1Q8N8J0 262 aa14.66□□□□□ -0.06
RTFDC1-207ENST00000477573 DDX21Q9NR30 783 aaKnown RBP eCLIP14.66□□□□□ -0.06
RTFDC1-207ENST00000477573 PDRG1Q9NUG6 133 aa14.66□□□□□ -0.06
RTFDC1-207ENST00000477573 CAND2O75155 1236 aa14.65□□□□□ -0.06
RTFDC1-207ENST00000477573 CASTP20810 708 aaKnown RBP14.65□□□□□ -0.06
RTFDC1-207ENST00000477573 PAX7P23759 505 aa14.65□□□□□ -0.06
RTFDC1-207ENST00000477573 PLCB2Q00722 1185 aa14.65□□□□□ -0.06
RTFDC1-207ENST00000477573 PDCD2Q16342 344 aaPredicted RBP14.65□□□□□ -0.06
RTFDC1-207ENST00000477573 USP44Q9H0E7 712 aa14.65□□□□□ -0.06
RTFDC1-207ENST00000477573 SPATS2LQ9NUQ6 558 aaKnown RBP14.65□□□□□ -0.06
RTFDC1-207ENST00000477573 HNRNPH1P31943 449 aaKnown RBP14.64□□□□□ -0.07
RTFDC1-207ENST00000477573 RBM5P52756 815 aaKnown RBP eCLIP14.64□□□□□ -0.07
RTFDC1-207ENST00000477573 ATP8B2P98198 1209 aa14.64□□□□□ -0.07
RTFDC1-207ENST00000477573 DDR1Q08345 913 aa14.64□□□□□ -0.07
RTFDC1-207ENST00000477573 TBC1D8BQ0IIM8 1120 aa14.64□□□□□ -0.07
RTFDC1-207ENST00000477573 ARHGAP29Q52LW3 1261 aa14.64□□□□□ -0.07
RTFDC1-207ENST00000477573 DDX11Q96FC9 970 aa14.64□□□□□ -0.07
RTFDC1-207ENST00000477573 FMNL2Q96PY5 1086 aa14.64□□□□□ -0.07
RTFDC1-207ENST00000477573 STRN4Q9NRL3 753 aa14.64□□□□□ -0.07
RTFDC1-207ENST00000477573 IRAK4Q9NWZ3 460 aa14.64□□□□□ -0.07
RTFDC1-207ENST00000477573 CLIP2Q9UDT6 1046 aa14.64□□□□□ -0.07
RTFDC1-207ENST00000477573 ERLIN2O94905 339 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms