RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 CAMSAP1Q5T5Y3 1602 aa12.8□□□□□ -0.36
COL27A1-204ENST00000477421 IPO7O95373 1038 aaKnown RBP12.8□□□□□ -0.36
COL27A1-204ENST00000477421 TNNT1P13805 278 aa12.8□□□□□ -0.36
COL27A1-204ENST00000477421 SSRP1Q08945 709 aaKnown RBP12.8□□□□□ -0.36
COL27A1-204ENST00000477421 PI16Q6UXB8 463 aa12.8□□□□□ -0.36
COL27A1-204ENST00000477421 LIG1P18858 919 aa12.8□□□□□ -0.36
COL27A1-204ENST00000477421 TTF1Q15361 905 aaPredicted RBP12.8□□□□□ -0.36
COL27A1-204ENST00000477421 ZNF771Q7L3S4 317 aaPredicted RBP12.8□□□□□ -0.36
COL27A1-204ENST00000477421 CPLX3Q8WVH0 158 aa12.8□□□□□ -0.36
COL27A1-204ENST00000477421 CYP27B1O15528 508 aa12.79□□□□□ -0.36
COL27A1-204ENST00000477421 GPAA1O43292 621 aa12.79□□□□□ -0.36
COL27A1-204ENST00000477421 LMOD1P29536 600 aaPredicted RBP12.79□□□□□ -0.36
COL27A1-204ENST00000477421 AOPEPQ8N6M6 819 aa12.79□□□□□ -0.36
COL27A1-204ENST00000477421 IL25Q9H293 177 aa12.79□□□□□ -0.36
COL27A1-204ENST00000477421 MYO3AQ8NEV4 1616 aa12.79□□□□□ -0.36
COL27A1-204ENST00000477421 USP5P45974 858 aa12.79□□□□□ -0.36
COL27A1-204ENST00000477421 TMC6Q7Z403 805 aa12.79□□□□□ -0.36
COL27A1-204ENST00000477421 IQCA1Q86XH1 822 aa12.79□□□□□ -0.36
COL27A1-204ENST00000477421 ZSWIM6Q9HCJ5 1215 aa12.79□□□□□ -0.36
COL27A1-204ENST00000477421 STX1AQ16623 288 aa12.79□□□□□ -0.36
COL27A1-204ENST00000477421 UVSSAQ2YD98 709 aa12.79□□□□□ -0.36
COL27A1-204ENST00000477421 DZIP1Q86YF9 867 aaKnown RBP12.79□□□□□ -0.36
COL27A1-204ENST00000477421 MKNK2Q9HBH9 465 aa12.79□□□□□ -0.36
COL27A1-204ENST00000477421 PRDM10Q9NQV6 1147 aa12.79□□□□□ -0.36
COL27A1-204ENST00000477421 PIK3C2BO00750 1634 aa12.79□□□□□ -0.36
COL27A1-204ENST00000477421 CHGBP05060 677 aa12.79□□□□□ -0.36
COL27A1-204ENST00000477421 POLA2Q14181 598 aa12.79□□□□□ -0.36
COL27A1-204ENST00000477421 PTPN14Q15678 1187 aa12.79□□□□□ -0.36
COL27A1-204ENST00000477421 TTC6Q86TZ1 520 aa12.79□□□□□ -0.36
COL27A1-204ENST00000477421 LEO1Q8WVC0 666 aaPredicted RBP12.79□□□□□ -0.36
COL27A1-204ENST00000477421 MRPS27Q92552 414 aaKnown RBP12.78□□□□□ -0.36
COL27A1-204ENST00000477421 MAP4K1Q92918 833 aa12.78□□□□□ -0.36
COL27A1-204ENST00000477421 MBD4O95243 580 aa12.78□□□□□ -0.36
COL27A1-204ENST00000477421 ADORA1P30542 326 aa12.78□□□□□ -0.36
COL27A1-204ENST00000477421 CCDC47Q96A33 483 aaKnown RBP12.78□□□□□ -0.36
COL27A1-204ENST00000477421 PRDM1O75626 825 aa12.78□□□□□ -0.36
COL27A1-204ENST00000477421 CYP21A2P08686 494 aa12.78□□□□□ -0.36
COL27A1-204ENST00000477421 SYKP43405 635 aa12.78□□□□□ -0.36
COL27A1-204ENST00000477421 PHKBQ93100 1093 aa12.78□□□□□ -0.36
COL27A1-204ENST00000477421 CDC5LQ99459 802 aaKnown RBP12.78□□□□□ -0.36
COL27A1-204ENST00000477421 ZDHHC9Q9Y397 364 aa12.78□□□□□ -0.36
COL27A1-204ENST00000477421 MED14O60244 1454 aa12.77□□□□□ -0.36
COL27A1-204ENST00000477421 A0A087WWV3 80 aa12.77□□□□□ -0.36
COL27A1-204ENST00000477421 SPTLC2O15270 562 aa12.77□□□□□ -0.36
COL27A1-204ENST00000477421 CTAGE5O15320 804 aa12.77□□□□□ -0.36
COL27A1-204ENST00000477421 PTPN12Q05209 780 aaKnown RBP12.77□□□□□ -0.36
COL27A1-204ENST00000477421 WTAPQ15007 396 aa12.77□□□□□ -0.36
COL27A1-204ENST00000477421 CCDC152Q4G0S7 254 aa12.77□□□□□ -0.36
COL27A1-204ENST00000477421 CTCFLQ8NI51 663 aaPredicted RBP12.77□□□□□ -0.36
COL27A1-204ENST00000477421 WASF1Q92558 559 aa12.77□□□□□ -0.36
COL27A1-204ENST00000477421 MROH2AA6NES4 1674 aa12.77□□□□□ -0.36
COL27A1-204ENST00000477421 CCDC196A0A1B0GTZ2 297 aa12.77□□□□□ -0.37
COL27A1-204ENST00000477421 RRP9O43818 475 aaKnown RBP12.77□□□□□ -0.37
COL27A1-204ENST00000477421 TXLNAP40222 546 aa12.77□□□□□ -0.37
COL27A1-204ENST00000477421 CUL4AQ13619 759 aa12.77□□□□□ -0.37
COL27A1-204ENST00000477421 CRB1P82279 1406 aa12.77□□□□□ -0.37
COL27A1-204ENST00000477421 E7EWF7 191 aa12.77□□□□□ -0.37
COL27A1-204ENST00000477421 UQCRFS1P1P0C7P4 283 aa12.77□□□□□ -0.37
COL27A1-204ENST00000477421 TM6SF1Q9BZW5 370 aa12.77□□□□□ -0.37
COL27A1-204ENST00000477421 COPRSQ9NQ92 184 aa12.77□□□□□ -0.37
COL27A1-204ENST00000477421 NOL7Q9UMY1 257 aaKnown RBP12.77□□□□□ -0.37
COL27A1-204ENST00000477421 CBX1P83916 185 aa12.76□□□□□ -0.37
COL27A1-204ENST00000477421 TCIRG1Q13488 830 aa12.76□□□□□ -0.37
COL27A1-204ENST00000477421 FILIP1LQ4L180 1135 aa12.76□□□□□ -0.37
COL27A1-204ENST00000477421 SPECC1Q5M775 1068 aa12.76□□□□□ -0.37
COL27A1-204ENST00000477421 PAXIP1Q6ZW49 1069 aaPredicted RBP12.76□□□□□ -0.37
COL27A1-204ENST00000477421 TSC1Q92574 1164 aa12.76□□□□□ -0.37
COL27A1-204ENST00000477421 ARMT1Q9H993 441 aa12.76□□□□□ -0.37
COL27A1-204ENST00000477421 VAT1LQ9HCJ6 419 aa12.76□□□□□ -0.37
COL27A1-204ENST00000477421 STX8Q9UNK0 236 aa12.76□□□□□ -0.37
COL27A1-204ENST00000477421 TSPY2A6NKD2 308 aa12.76□□□□□ -0.37
COL27A1-204ENST00000477421 SSBP05455 408 aaKnown RBP eCLIP12.76□□□□□ -0.37
COL27A1-204ENST00000477421 NBPF5PQ86XG9 351 aaPredicted RBP12.76□□□□□ -0.37
COL27A1-204ENST00000477421 FTOQ9C0B1 505 aaKnown RBP eCLIP12.76□□□□□ -0.37
COL27A1-204ENST00000477421 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.76□□□□□ -0.372e-16■■□□□ 14.5
COL27A1-204ENST00000477421 V9GYY5 206 aaPredicted RBP12.76□□□□□ -0.37
COL27A1-204ENST00000477421 SMTNL1A8MU46 457 aa12.76□□□□□ -0.37
COL27A1-204ENST00000477421 HSPD1P10809 573 aaKnown RBP12.76□□□□□ -0.37
COL27A1-204ENST00000477421 AFMP43652 599 aa12.76□□□□□ -0.37
COL27A1-204ENST00000477421 PPFIBP1Q86W92 1011 aa12.76□□□□□ -0.37
COL27A1-204ENST00000477421 SYNE4Q8N205 404 aa12.76□□□□□ -0.37
COL27A1-204ENST00000477421 MAP7D2Q96T17 732 aa12.76□□□□□ -0.37
COL27A1-204ENST00000477421 UTP14AQ9BVJ6 771 aaKnown RBP12.76□□□□□ -0.37
COL27A1-204ENST00000477421 ZHX3Q9H4I2 956 aa12.76□□□□□ -0.37
COL27A1-204ENST00000477421 HELLSQ9NRZ9 838 aa12.76□□□□□ -0.37
COL27A1-204ENST00000477421 hCG_1642624A0A1W2PR95 340 aa12.75□□□□□ -0.37
COL27A1-204ENST00000477421 OFD1O75665 1012 aa12.75□□□□□ -0.37
COL27A1-204ENST00000477421 NAP1L1P55209 391 aaKnown RBP12.75□□□□□ -0.37
COL27A1-204ENST00000477421 KCNQ4P56696 695 aa12.75□□□□□ -0.37
COL27A1-204ENST00000477421 ANKRD18AQ8IVF6 992 aa12.75□□□□□ -0.37
COL27A1-204ENST00000477421 CD163L1Q9NR16 1453 aa12.75□□□□□ -0.37
COL27A1-204ENST00000477421 RGS12O14924 1447 aa12.75□□□□□ -0.37
COL27A1-204ENST00000477421 SNAP23O00161 211 aa12.75□□□□□ -0.37
COL27A1-204ENST00000477421 SKILP12757 684 aa12.75□□□□□ -0.37
COL27A1-204ENST00000477421 NLRP5P59047 1200 aa12.75□□□□□ -0.37
COL27A1-204ENST00000477421 PDCL2Q8N4E4 241 aa12.75□□□□□ -0.37
COL27A1-204ENST00000477421 APPBP2Q92624 585 aa12.75□□□□□ -0.37
COL27A1-204ENST00000477421 C8orf37Q96NL8 207 aa12.75□□□□□ -0.37
COL27A1-204ENST00000477421 RNF41Q9H4P4 317 aaPredicted RBP12.75□□□□□ -0.37
COL27A1-204ENST00000477421 ZNF219Q9P2Y4 722 aaPredicted RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 174.6 ms