RNA–Protein interactions for RNA: ENST00000476970.1

PRPF3-205, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 1,005 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-205ENST00000476970 RBM27Q9P2N5 1060 aaKnown RBP9.69□□□□□ -0.86
PRPF3-205ENST00000476970 GGA1Q9UJY5 639 aa9.69□□□□□ -0.86
PRPF3-205ENST00000476970 MYO3BQ8WXR4 1341 aa9.68□□□□□ -0.86
PRPF3-205ENST00000476970 A0A1W2PPC1 479 aa9.68□□□□□ -0.86
PRPF3-205ENST00000476970 USP17L3A6NCW0 530 aa9.68□□□□□ -0.86
PRPF3-205ENST00000476970 USP17L4A6NCW7 530 aa9.68□□□□□ -0.86
PRPF3-205ENST00000476970 MMP14P50281 582 aa9.68□□□□□ -0.86
PRPF3-205ENST00000476970 SF3B3Q15393 1217 aaKnown RBP9.68□□□□□ -0.86
PRPF3-205ENST00000476970 LDLRAD1Q5T700 205 aa9.68□□□□□ -0.86
PRPF3-205ENST00000476970 PRAMEF18Q5VWM3 479 aa9.68□□□□□ -0.86
PRPF3-205ENST00000476970 USP17L1Q7RTZ2 530 aa9.68□□□□□ -0.86
PRPF3-205ENST00000476970 GMLQ99445 158 aa9.68□□□□□ -0.86
PRPF3-205ENST00000476970 ANGEL1Q9UNK9 670 aaKnown RBP9.68□□□□□ -0.86
PRPF3-205ENST00000476970 UNCXA6NJT0 531 aa9.67□□□□□ -0.86
PRPF3-205ENST00000476970 IGF2BP3O00425 579 aaKnown RBP eCLIP9.67□□□□□ -0.86
PRPF3-205ENST00000476970 CRHR2Q13324 411 aa9.67□□□□□ -0.86
PRPF3-205ENST00000476970 PRKG1Q13976 671 aa9.67□□□□□ -0.86
PRPF3-205ENST00000476970 NBPF9Q3BBW0 867 aa9.67□□□□□ -0.86
PRPF3-205ENST00000476970 PODNQ7Z5L7 613 aa9.67□□□□□ -0.86
PRPF3-205ENST00000476970 DPF3Q92784 378 aa9.67□□□□□ -0.86
PRPF3-205ENST00000476970 SLC10A4Q96EP9 437 aa9.67□□□□□ -0.86
PRPF3-205ENST00000476970 WNK4Q96J92 1243 aa9.67□□□□□ -0.86
PRPF3-205ENST00000476970 THUMPD2Q9BTF0 503 aaKnown RBP9.67□□□□□ -0.86
PRPF3-205ENST00000476970 HTATIP2Q9BUP3 242 aa9.67□□□□□ -0.86
PRPF3-205ENST00000476970 SCAF8Q9UPN6 1271 aaKnown RBP9.67□□□□□ -0.86
PRPF3-205ENST00000476970 WNT10BO00744 389 aa9.66□□□□□ -0.86
PRPF3-205ENST00000476970 PER1O15534 1290 aaPredicted RBP9.66□□□□□ -0.86
PRPF3-205ENST00000476970 PPP1R12BO60237 982 aaPredicted RBP9.66□□□□□ -0.86
PRPF3-205ENST00000476970 HSP90B1P14625 803 aaKnown RBP9.66□□□□□ -0.86
PRPF3-205ENST00000476970 RPS8P62241 208 aaKnown RBP9.66□□□□□ -0.86
PRPF3-205ENST00000476970 LRP10Q7Z4F1 713 aa9.66□□□□□ -0.86
PRPF3-205ENST00000476970 NR2E3Q9Y5X4 410 aa9.66□□□□□ -0.86
PRPF3-205ENST00000476970 COL4A1P02462 1669 aa9.65□□□□□ -0.86
PRPF3-205ENST00000476970 EIF2S2P20042 333 aaKnown RBP9.65□□□□□ -0.86
PRPF3-205ENST00000476970 PDIA6Q15084 440 aa9.65□□□□□ -0.86
PRPF3-205ENST00000476970 MAP3K11Q16584 847 aa9.65□□□□□ -0.86
PRPF3-205ENST00000476970 PIP4P2Q8N4L2 257 aa9.65□□□□□ -0.86
PRPF3-205ENST00000476970 NKX2-3Q8TAU0 364 aa9.65□□□□□ -0.86
PRPF3-205ENST00000476970 PTCH2Q9Y6C5 1203 aa9.65□□□□□ -0.86
PRPF3-205ENST00000476970 OTOFQ9HC10 1997 aa9.64□□□□□ -0.87
PRPF3-205ENST00000476970 LAMA3Q16787 3333 aa9.64□□□□□ -0.87
PRPF3-205ENST00000476970 XDHP47989 1333 aa9.64□□□□□ -0.87
PRPF3-205ENST00000476970 WDHD1O75717 1129 aaPredicted RBP9.64□□□□□ -0.87
PRPF3-205ENST00000476970 AIMP1Q12904 312 aaKnown RBP9.64□□□□□ -0.87
PRPF3-205ENST00000476970 ANKRD13DQ6ZTN6 518 aa9.64□□□□□ -0.87
PRPF3-205ENST00000476970 COPS6Q7L5N1 327 aa9.64□□□□□ -0.87
PRPF3-205ENST00000476970 XAGE3Q8WTP9 111 aa9.64□□□□□ -0.87
PRPF3-205ENST00000476970 PPP2R3BQ9Y5P8 575 aa9.64□□□□□ -0.87
PRPF3-205ENST00000476970 MED23Q9ULK4 1368 aa9.63□□□□□ -0.87
PRPF3-205ENST00000476970 CLSPNQ9HAW4 1339 aa9.63□□□□□ -0.87
PRPF3-205ENST00000476970 SASH1O94885 1247 aa9.63□□□□□ -0.87
PRPF3-205ENST00000476970 ANXA1P04083 346 aa9.63□□□□□ -0.87
PRPF3-205ENST00000476970 ATP2B4P23634 1241 aa9.63□□□□□ -0.87
PRPF3-205ENST00000476970 IREB2P48200 963 aaKnown RBP9.63□□□□□ -0.87
PRPF3-205ENST00000476970 CNGB1Q14028 1251 aaPredicted RBP9.63□□□□□ -0.87
PRPF3-205ENST00000476970 KIF22Q14807 665 aa9.63□□□□□ -0.87
PRPF3-205ENST00000476970 PROSER3Q2NL68 480 aa9.63□□□□□ -0.87
PRPF3-205ENST00000476970 FBXW7Q969H0 707 aa9.63□□□□□ -0.87
PRPF3-205ENST00000476970 FAM89AQ96GI7 184 aa9.63□□□□□ -0.87
PRPF3-205ENST00000476970 PRO3102Q9H379 93 aa9.63□□□□□ -0.87
PRPF3-205ENST00000476970 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.63□□□□□ -0.87
PRPF3-205ENST00000476970 TSPYL4Q9UJ04 414 aa9.63□□□□□ -0.87
PRPF3-205ENST00000476970 SPEF2Q9C093 1822 aa9.63□□□□□ -0.87
PRPF3-205ENST00000476970 IRS4O14654 1257 aaPredicted RBP9.62□□□□□ -0.87
PRPF3-205ENST00000476970 MYCP01106 439 aaPredicted RBP9.62□□□□□ -0.87
PRPF3-205ENST00000476970 GNRH1P01148 92 aa9.62□□□□□ -0.87
PRPF3-205ENST00000476970 PRMT2P55345 433 aa9.62□□□□□ -0.87
PRPF3-205ENST00000476970 TAF1CQ15572 869 aaPredicted RBP9.62□□□□□ -0.87
PRPF3-205ENST00000476970 STRIP1Q5VSL9 837 aa9.62□□□□□ -0.87
PRPF3-205ENST00000476970 GPR153Q6NV75 609 aa9.62□□□□□ -0.87
PRPF3-205ENST00000476970 ZFYVE28Q9HCC9 887 aa9.62□□□□□ -0.87
PRPF3-205ENST00000476970 MYH3P11055 1940 aa9.62□□□□□ -0.87
PRPF3-205ENST00000476970 UNC80Q8N2C7 3258 aa9.62□□□□□ -0.87
PRPF3-205ENST00000476970 TESPA1A2RU30 521 aaPredicted RBP9.61□□□□□ -0.87
PRPF3-205ENST00000476970 SUPT20HL1Q3ZLR7 823 aa9.61□□□□□ -0.87
PRPF3-205ENST00000476970 CCDC152Q4G0S7 254 aa9.61□□□□□ -0.87
PRPF3-205ENST00000476970 DACT2Q5SW24 774 aa9.61□□□□□ -0.87
PRPF3-205ENST00000476970 ANKRD13AQ8IZ07 590 aa9.61□□□□□ -0.87
PRPF3-205ENST00000476970 PLBD2Q8NHP8 589 aa9.61□□□□□ -0.87
PRPF3-205ENST00000476970 SH3TC2Q8TF17 1288 aa9.61□□□□□ -0.87
PRPF3-205ENST00000476970 CLMNQ96JQ2 1002 aa9.61□□□□□ -0.87
PRPF3-205ENST00000476970 DEFB129Q9H1M3 183 aa9.61□□□□□ -0.87
PRPF3-205ENST00000476970 SSC5DA1L4H1 1573 aa9.61□□□□□ -0.87
PRPF3-205ENST00000476970 ZSWIM8A7E2V4 1837 aa9.61□□□□□ -0.87
PRPF3-205ENST00000476970 ZBTB7BO15156 539 aaPredicted RBP9.6□□□□□ -0.87
PRPF3-205ENST00000476970 NFE2L2Q16236 605 aa9.6□□□□□ -0.87
PRPF3-205ENST00000476970 ANKRD18AQ8IVF6 992 aa9.6□□□□□ -0.87
PRPF3-205ENST00000476970 SHISA4Q96DD7 197 aa9.6□□□□□ -0.87
PRPF3-205ENST00000476970 ISCA1Q9BUE6 129 aa9.6□□□□□ -0.87
PRPF3-205ENST00000476970 BABAM1Q9NWV8 329 aa9.6□□□□□ -0.87
PRPF3-205ENST00000476970 STXBP5LQ9Y2K9 1186 aa9.6□□□□□ -0.87
PRPF3-205ENST00000476970 ZNF804BA4D1E1 1349 aa9.59□□□□□ -0.87
PRPF3-205ENST00000476970 MAPK8IP3Q9UPT6 1336 aa9.59□□□□□ -0.87
PRPF3-205ENST00000476970 WTIPA6NIX2 430 aaPredicted RBP9.59□□□□□ -0.87
PRPF3-205ENST00000476970 SOX1O00570 391 aaPredicted RBP9.59□□□□□ -0.87
PRPF3-205ENST00000476970 MYO1BO43795 1136 aa9.59□□□□□ -0.87
PRPF3-205ENST00000476970 CAP1Q01518 475 aa9.59□□□□□ -0.87
PRPF3-205ENST00000476970 RTL5Q5HYW3 569 aaPredicted RBP9.59□□□□□ -0.87
PRPF3-205ENST00000476970 ZNF428Q96B54 188 aa9.59□□□□□ -0.87
PRPF3-205ENST00000476970 LRCH3Q96II8 777 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms