RNA–Protein interactions for RNA: ENST00000476743.5

MSL3-213, Transcript of MSL complex subunit 3, humanhuman

TSL 4

Gene MSL3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-213ENST00000476743 USP17L3A6NCW0 530 aa17.24■□□□□ 0.35
MSL3-213ENST00000476743 USP17L4A6NCW7 530 aa17.24■□□□□ 0.35
MSL3-213ENST00000476743 H7C1D1 291 aa17.24■□□□□ 0.35
MSL3-213ENST00000476743 IPO8O15397 1037 aaKnown RBP17.24■□□□□ 0.35
MSL3-213ENST00000476743 TAF5LO75529 589 aa17.24■□□□□ 0.35
MSL3-213ENST00000476743 TRIM27P14373 513 aa17.24■□□□□ 0.35
MSL3-213ENST00000476743 ATF7IPQ6VMQ6 1270 aa17.24■□□□□ 0.35
MSL3-213ENST00000476743 USP17L1Q7RTZ2 530 aa17.24■□□□□ 0.35
MSL3-213ENST00000476743 HELBQ8NG08 1087 aaPredicted RBP17.24■□□□□ 0.35
MSL3-213ENST00000476743 TRPM4Q8TD43 1214 aa17.24■□□□□ 0.35
MSL3-213ENST00000476743 CNNM1Q9NRU3 951 aa17.24■□□□□ 0.35
MSL3-213ENST00000476743 CREBZFQ9NS37 354 aa17.24■□□□□ 0.35
MSL3-213ENST00000476743 TRPM7Q96QT4 1865 aa17.23■□□□□ 0.35
MSL3-213ENST00000476743 SNAP23O00161 211 aa17.23■□□□□ 0.35
MSL3-213ENST00000476743 KCNJ4P48050 445 aa17.23■□□□□ 0.35
MSL3-213ENST00000476743 RFX5P48382 616 aaPredicted RBP17.23■□□□□ 0.35
MSL3-213ENST00000476743 KLRG1Q96E93 195 aa17.23■□□□□ 0.35
MSL3-213ENST00000476743 PUS3Q9BZE2 481 aaKnown RBP17.23■□□□□ 0.35
MSL3-213ENST00000476743 MROH5Q6ZUA9 1318 aa17.22■□□□□ 0.35
MSL3-213ENST00000476743 UBTFL1P0CB47 393 aaPredicted RBP17.22■□□□□ 0.35
MSL3-213ENST00000476743 ZNF280AP59817 542 aaPredicted RBP17.22■□□□□ 0.35
MSL3-213ENST00000476743 DACT2Q5SW24 774 aa17.22■□□□□ 0.35
MSL3-213ENST00000476743 STRIP1Q5VSL9 837 aa17.22■□□□□ 0.35
MSL3-213ENST00000476743 HDAC5Q9UQL6 1122 aa17.22■□□□□ 0.35
MSL3-213ENST00000476743 UBE4AQ14139 1066 aa17.21■□□□□ 0.35
MSL3-213ENST00000476743 SAMD7Q7Z3H4 446 aa17.21■□□□□ 0.35
MSL3-213ENST00000476743 CD209Q9NNX6 404 aa17.21■□□□□ 0.35
MSL3-213ENST00000476743 MYO3BQ8WXR4 1341 aa17.21■□□□□ 0.34
MSL3-213ENST00000476743 TMEM88BA6NKF7 163 aa17.2■□□□□ 0.34
MSL3-213ENST00000476743 EGFRP00533 1210 aa17.2■□□□□ 0.34
MSL3-213ENST00000476743 IL1R1P14778 569 aa17.2■□□□□ 0.34
MSL3-213ENST00000476743 VGLL2Q8N8G2 317 aa17.2■□□□□ 0.34
MSL3-213ENST00000476743 JMYQ8N9B5 988 aa17.2■□□□□ 0.34
MSL3-213ENST00000476743 MEIS3Q99687 375 aa17.2■□□□□ 0.34
MSL3-213ENST00000476743 TNNQ9UQP3 1299 aa17.2■□□□□ 0.34
MSL3-213ENST00000476743 MMP14P50281 582 aa17.19■□□□□ 0.34
MSL3-213ENST00000476743 PTPN12Q05209 780 aaKnown RBP17.19■□□□□ 0.34
MSL3-213ENST00000476743 TBC1D10BQ4KMP7 808 aaPredicted RBP17.19■□□□□ 0.34
MSL3-213ENST00000476743 LRRC24Q50LG9 513 aa17.19■□□□□ 0.34
MSL3-213ENST00000476743 ZKSCAN2Q63HK3 967 aa17.19■□□□□ 0.34
MSL3-213ENST00000476743 FRAT1Q92837 279 aaPredicted RBP17.19■□□□□ 0.34
MSL3-213ENST00000476743 LRRFIP2Q9Y608 721 aaKnown RBP17.19■□□□□ 0.34
MSL3-213ENST00000476743 POLR2AP24928 1970 aaKnown RBP17.19■□□□□ 0.34
MSL3-213ENST00000476743 PLIN1O60240 522 aa17.18■□□□□ 0.34
MSL3-213ENST00000476743 GNAI3P08754 354 aa17.18■□□□□ 0.34
MSL3-213ENST00000476743 USP17L8P0C7I0 530 aa17.18■□□□□ 0.34
MSL3-213ENST00000476743 KIF4BQ2VIQ3 1234 aa17.18■□□□□ 0.34
MSL3-213ENST00000476743 TTLL5Q6EMB2 1281 aa17.18■□□□□ 0.34
MSL3-213ENST00000476743 ZNF804AQ7Z570 1209 aa17.18■□□□□ 0.34
MSL3-213ENST00000476743 KLHDC4Q8TBB5 520 aa17.18■□□□□ 0.34
MSL3-213ENST00000476743 FBXO3Q9UK99 471 aa17.18■□□□□ 0.34
MSL3-213ENST00000476743 PCNTO95613 3336 aa17.18■□□□□ 0.34
MSL3-213ENST00000476743 EYA2O00167 538 aa17.17■□□□□ 0.34
MSL3-213ENST00000476743 PDE8BO95263 885 aa17.17■□□□□ 0.34
MSL3-213ENST00000476743 MTX1Q13505 466 aa17.17■□□□□ 0.34
MSL3-213ENST00000476743 CDC37L1Q7L3B6 337 aa17.17■□□□□ 0.34
MSL3-213ENST00000476743 TRAF5O00463 557 aa17.16■□□□□ 0.34
MSL3-213ENST00000476743 FKBP1AP62942 108 aaKnown RBP17.16■□□□□ 0.34
MSL3-213ENST00000476743 GTF2IP78347 998 aa17.16■□□□□ 0.34
MSL3-213ENST00000476743 FMR1Q06787 632 aaKnown RBP eCLIP17.16■□□□□ 0.34
MSL3-213ENST00000476743 METTL24Q5JXM2 366 aa17.16■□□□□ 0.34
MSL3-213ENST00000476743 MXD3Q9BW11 206 aa17.16■□□□□ 0.34
MSL3-213ENST00000476743 GLIS2Q9BZE0 524 aaPredicted RBP17.16■□□□□ 0.34
MSL3-213ENST00000476743 MYOZ2Q9NPC6 264 aa17.16■□□□□ 0.34
MSL3-213ENST00000476743 ARAP2Q8WZ64 1704 aa17.16■□□□□ 0.34
MSL3-213ENST00000476743 CNTNAP1P78357 1384 aa17.15■□□□□ 0.34
MSL3-213ENST00000476743 CIAO1O76071 339 aa17.15■□□□□ 0.34
MSL3-213ENST00000476743 RBM26Q5T8P6 1007 aaKnown RBP17.15■□□□□ 0.34
MSL3-213ENST00000476743 CST9Q5W186 159 aa17.15■□□□□ 0.34
MSL3-213ENST00000476743 ATG9AQ7Z3C6 839 aa17.15■□□□□ 0.34
MSL3-213ENST00000476743 TMEM57Q8N5G2 664 aa17.15■□□□□ 0.34
MSL3-213ENST00000476743 TDRD7Q8NHU6 1098 aaKnown RBP17.15■□□□□ 0.34
MSL3-213ENST00000476743 CLUAP1Q96AJ1 413 aa17.15■□□□□ 0.34
MSL3-213ENST00000476743 FAM84BQ96KN1 310 aaPredicted RBP17.15■□□□□ 0.34
MSL3-213ENST00000476743 FAM205AQ6ZU69 1335 aa17.15■□□□□ 0.34
MSL3-213ENST00000476743 RASSF10A6NK89 507 aa17.14■□□□□ 0.33
MSL3-213ENST00000476743 SASH1O94885 1247 aa17.14■□□□□ 0.33
MSL3-213ENST00000476743 FGFR2P21802 821 aa17.14■□□□□ 0.33
MSL3-213ENST00000476743 HIBADHP31937 336 aaKnown RBP17.14■□□□□ 0.33
MSL3-213ENST00000476743 FBXO33Q7Z6M2 555 aa17.14■□□□□ 0.33
MSL3-213ENST00000476743 CERS5Q8N5B7 392 aa17.14■□□□□ 0.33
MSL3-213ENST00000476743 COPRSQ9NQ92 184 aa17.14■□□□□ 0.33
MSL3-213ENST00000476743 GYG1P46976 350 aa17.13■□□□□ 0.33
MSL3-213ENST00000476743 OGFOD1Q8N543 542 aa17.13■□□□□ 0.33
MSL3-213ENST00000476743 FBXW7Q969H0 707 aa17.13■□□□□ 0.33
MSL3-213ENST00000476743 PITPNM2Q9BZ72 1349 aa17.13■□□□□ 0.33
MSL3-213ENST00000476743 SCARF1Q14162 830 aa17.12■□□□□ 0.33
MSL3-213ENST00000476743 PUM3Q15397 648 aaKnown RBP17.12■□□□□ 0.33
MSL3-213ENST00000476743 DZIP1LQ8IYY4 767 aaKnown RBP17.12■□□□□ 0.33
MSL3-213ENST00000476743 DCPSQ96C86 337 aaKnown RBP17.12■□□□□ 0.33
MSL3-213ENST00000476743 ZBED3Q96IU2 234 aaPredicted RBP17.12■□□□□ 0.33
MSL3-213ENST00000476743 GGA3Q9NZ52 723 aa17.12■□□□□ 0.33
MSL3-213ENST00000476743 ASTN2O75129 1339 aaPredicted RBP17.12■□□□□ 0.33
MSL3-213ENST00000476743 ECM29Q5VYK3 1845 aa17.12■□□□□ 0.33
MSL3-213ENST00000476743 GNAI2P04899 355 aa17.11■□□□□ 0.33
MSL3-213ENST00000476743 RLBP1P12271 317 aa17.11■□□□□ 0.33
MSL3-213ENST00000476743 KRT26Q7Z3Y9 468 aa17.11■□□□□ 0.33
MSL3-213ENST00000476743 USP48Q86UV5 1035 aa17.11■□□□□ 0.33
MSL3-213ENST00000476743 MKRN1Q9UHC7 482 aaKnown RBP17.11■□□□□ 0.33
MSL3-213ENST00000476743 TLL2Q9Y6L7 1015 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms