RNA–Protein interactions for RNA: ENST00000476259.1

RAPGEF3-208, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 3

Gene RAPGEF3, Length 824 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-208ENST00000476259 LDHAL6AQ6ZMR3 332 aa22.55■■□□□ 1.2
RAPGEF3-208ENST00000476259 AGBL3Q8NEM8 1001 aa22.55■■□□□ 1.2
RAPGEF3-208ENST00000476259 HELBQ8NG08 1087 aaPredicted RBP22.55■■□□□ 1.2
RAPGEF3-208ENST00000476259 GLIS2Q9BZE0 524 aaPredicted RBP22.55■■□□□ 1.2
RAPGEF3-208ENST00000476259 COA1Q9GZY4 146 aa22.55■■□□□ 1.2
RAPGEF3-208ENST00000476259 CNNM1Q9NRU3 951 aa22.54■■□□□ 1.2
RAPGEF3-208ENST00000476259 KIF4BQ2VIQ3 1234 aa22.53■■□□□ 1.2
RAPGEF3-208ENST00000476259 BICC1Q9H694 974 aaKnown RBP22.53■■□□□ 1.2
RAPGEF3-208ENST00000476259 ABT1Q9ULW3 272 aaKnown RBP22.53■■□□□ 1.2
RAPGEF3-208ENST00000476259 PCNTO95613 3336 aa22.52■■□□□ 1.2
RAPGEF3-208ENST00000476259 SNAP23O00161 211 aa22.52■■□□□ 1.2
RAPGEF3-208ENST00000476259 CST9Q5W186 159 aa22.52■■□□□ 1.2
RAPGEF3-208ENST00000476259 CDC37L1Q7L3B6 337 aa22.52■■□□□ 1.2
RAPGEF3-208ENST00000476259 FBXW7Q969H0 707 aa22.52■■□□□ 1.2
RAPGEF3-208ENST00000476259 GMLQ99445 158 aa22.52■■□□□ 1.2
RAPGEF3-208ENST00000476259 USP44Q9H0E7 712 aa22.52■■□□□ 1.2
RAPGEF3-208ENST00000476259 NOB1Q9ULX3 412 aaKnown RBP22.52■■□□□ 1.2
RAPGEF3-208ENST00000476259 RASSF10A6NK89 507 aa22.51■■□□□ 1.19
RAPGEF3-208ENST00000476259 BRPF1P55201 1214 aaPredicted RBP22.51■■□□□ 1.19
RAPGEF3-208ENST00000476259 RABL6Q3YEC7 729 aaPredicted RBP22.51■■□□□ 1.19
RAPGEF3-208ENST00000476259 PLIN1O60240 522 aa22.5■■□□□ 1.19
RAPGEF3-208ENST00000476259 RARSP54136 660 aaKnown RBP22.5■■□□□ 1.19
RAPGEF3-208ENST00000476259 ZNF280AP59817 542 aaPredicted RBP22.5■■□□□ 1.19
RAPGEF3-208ENST00000476259 HNRNPUQ00839 825 aaKnown RBP eCLIP22.5■■□□□ 1.19
RAPGEF3-208ENST00000476259 DEFB115Q30KQ5 88 aa22.5■■□□□ 1.19
RAPGEF3-208ENST00000476259 DACT2Q5SW24 774 aa22.5■■□□□ 1.19
RAPGEF3-208ENST00000476259 STRIP1Q5VSL9 837 aa22.5■■□□□ 1.19
RAPGEF3-208ENST00000476259 ANKRD44Q8N8A2 993 aa22.5■■□□□ 1.19
RAPGEF3-208ENST00000476259 IRS2Q9Y4H2 1338 aa22.5■■□□□ 1.19
RAPGEF3-208ENST00000476259 USP17L8P0C7I0 530 aa22.49■■□□□ 1.19
RAPGEF3-208ENST00000476259 VEGFBP49765 207 aa22.49■■□□□ 1.19
RAPGEF3-208ENST00000476259 C15orf52Q6ZUT6 534 aaKnown RBP22.49■■□□□ 1.19
RAPGEF3-208ENST00000476259 USP48Q86UV5 1035 aa22.49■■□□□ 1.19
RAPGEF3-208ENST00000476259 DCPSQ96C86 337 aaKnown RBP22.49■■□□□ 1.19
RAPGEF3-208ENST00000476259 MXD3Q9BW11 206 aa22.49■■□□□ 1.19
RAPGEF3-208ENST00000476259 API5Q9BZZ5 524 aaKnown RBP22.49■■□□□ 1.19
RAPGEF3-208ENST00000476259 MYO3BQ8WXR4 1341 aa22.49■■□□□ 1.19
RAPGEF3-208ENST00000476259 CELF2O95319 508 aaKnown RBP22.48■■□□□ 1.19
RAPGEF3-208ENST00000476259 PUS3Q9BZE2 481 aaKnown RBP22.48■■□□□ 1.19
RAPGEF3-208ENST00000476259 ZNF408Q9H9D4 720 aa22.48■■□□□ 1.19
RAPGEF3-208ENST00000476259 CD209Q9NNX6 404 aa22.48■■□□□ 1.19
RAPGEF3-208ENST00000476259 HSPA1AP0DMV8 641 aaKnown RBP22.47■■□□□ 1.19
RAPGEF3-208ENST00000476259 HSPA1BP0DMV9 641 aaKnown RBP22.47■■□□□ 1.19
RAPGEF3-208ENST00000476259 TTLL5Q6EMB2 1281 aa22.47■■□□□ 1.19
RAPGEF3-208ENST00000476259 KRT26Q7Z3Y9 468 aa22.47■■□□□ 1.19
RAPGEF3-208ENST00000476259 MYOZ2Q9NPC6 264 aa22.47■■□□□ 1.19
RAPGEF3-208ENST00000476259 GGA3Q9NZ52 723 aa22.47■■□□□ 1.19
RAPGEF3-208ENST00000476259 KIF16BQ96L93 1317 aa22.47■■□□□ 1.19
RAPGEF3-208ENST00000476259 GTF2IP78347 998 aa22.46■■□□□ 1.19
RAPGEF3-208ENST00000476259 ZNF804AQ7Z570 1209 aa22.46■■□□□ 1.19
RAPGEF3-208ENST00000476259 TLL2Q9Y6L7 1015 aa22.46■■□□□ 1.19
RAPGEF3-208ENST00000476259 ASTN2O75129 1339 aaPredicted RBP22.46■■□□□ 1.19
RAPGEF3-208ENST00000476259 THSD7BQ9C0I4 1608 aa22.46■■□□□ 1.19
RAPGEF3-208ENST00000476259 ECM29Q5VYK3 1845 aa22.45■■□□□ 1.19
RAPGEF3-208ENST00000476259 SCARF1Q14162 830 aa22.45■■□□□ 1.18
RAPGEF3-208ENST00000476259 DLK2Q6UY11 383 aa22.45■■□□□ 1.18
RAPGEF3-208ENST00000476259 ADM5C9JUS6 153 aa22.44■■□□□ 1.18
RAPGEF3-208ENST00000476259 MROH5Q6ZUA9 1318 aa22.44■■□□□ 1.18
RAPGEF3-208ENST00000476259 PAXIP1Q6ZW49 1069 aaPredicted RBP22.44■■□□□ 1.18
RAPGEF3-208ENST00000476259 OGFOD1Q8N543 542 aa22.44■■□□□ 1.18
RAPGEF3-208ENST00000476259 ARAP2Q8WZ64 1704 aa22.44■■□□□ 1.18
RAPGEF3-208ENST00000476259 WDR33Q9C0J8 1336 aaKnown RBP22.44■■□□□ 1.18
RAPGEF3-208ENST00000476259 RIPOR2Q9Y4F9 1068 aa22.44■■□□□ 1.18
RAPGEF3-208ENST00000476259 UBTFL1P0CB47 393 aaPredicted RBP22.43■■□□□ 1.18
RAPGEF3-208ENST00000476259 IL1R1P14778 569 aa22.43■■□□□ 1.18
RAPGEF3-208ENST00000476259 UBE4AQ14139 1066 aa22.43■■□□□ 1.18
RAPGEF3-208ENST00000476259 LRRC24Q50LG9 513 aa22.43■■□□□ 1.18
RAPGEF3-208ENST00000476259 ANGEL2Q5VTE6 544 aaKnown RBP22.43■■□□□ 1.18
RAPGEF3-208ENST00000476259 SAPCD2Q86UD0 394 aa22.43■■□□□ 1.18
RAPGEF3-208ENST00000476259 SULF1Q8IWU6 871 aa22.43■■□□□ 1.18
RAPGEF3-208ENST00000476259 KLHDC4Q8TBB5 520 aa22.43■■□□□ 1.18
RAPGEF3-208ENST00000476259 ARHGAP45Q92619 1136 aa22.43■■□□□ 1.18
RAPGEF3-208ENST00000476259 MYH13Q9UKX3 1938 aa22.42■■□□□ 1.18
RAPGEF3-208ENST00000476259 ECE1P42892 770 aa22.41■■□□□ 1.18
RAPGEF3-208ENST00000476259 GRM1Q13255 1194 aa22.41■■□□□ 1.18
RAPGEF3-208ENST00000476259 METTL24Q5JXM2 366 aa22.41■■□□□ 1.18
RAPGEF3-208ENST00000476259 CYP4F22Q6NT55 531 aa22.41■■□□□ 1.18
RAPGEF3-208ENST00000476259 KIAA0825Q8IV33 1275 aa22.41■■□□□ 1.18
RAPGEF3-208ENST00000476259 CAPNS2Q96L46 248 aa22.41■■□□□ 1.18
RAPGEF3-208ENST00000476259 MMP14P50281 582 aa22.4■■□□□ 1.18
RAPGEF3-208ENST00000476259 NBPF9Q3BBW0 867 aa22.4■■□□□ 1.18
RAPGEF3-208ENST00000476259 HDAC9Q9UKV0 1011 aa22.4■■□□□ 1.18
RAPGEF3-208ENST00000476259 PITPNM2Q9BZ72 1349 aa22.39■■□□□ 1.18
RAPGEF3-208ENST00000476259 BCAR3O75815 825 aa22.39■■□□□ 1.17
RAPGEF3-208ENST00000476259 GYG1P46976 350 aa22.39■■□□□ 1.17
RAPGEF3-208ENST00000476259 WNT10BO00744 389 aa22.38■■□□□ 1.17
RAPGEF3-208ENST00000476259 IPO8O15397 1037 aaKnown RBP22.38■■□□□ 1.17
RAPGEF3-208ENST00000476259 HIBADHP31937 336 aaKnown RBP22.38■■□□□ 1.17
RAPGEF3-208ENST00000476259 RFX5P48382 616 aaPredicted RBP22.38■■□□□ 1.17
RAPGEF3-208ENST00000476259 INTS3Q68E01 1043 aaKnown RBP22.38■■□□□ 1.17
RAPGEF3-208ENST00000476259 CERS5Q8N5B7 392 aa22.38■■□□□ 1.17
RAPGEF3-208ENST00000476259 VGLL2Q8N8G2 317 aa22.38■■□□□ 1.17
RAPGEF3-208ENST00000476259 FRAT1Q92837 279 aaPredicted RBP22.38■■□□□ 1.17
RAPGEF3-208ENST00000476259 HHIPL1Q96JK4 782 aa22.38■■□□□ 1.17
RAPGEF3-208ENST00000476259 MEIS3Q99687 375 aa22.38■■□□□ 1.17
RAPGEF3-208ENST00000476259 HDAC5Q9UQL6 1122 aa22.38■■□□□ 1.17
RAPGEF3-208ENST00000476259 SASH1O94885 1247 aa22.37■■□□□ 1.17
RAPGEF3-208ENST00000476259 PDE8BO95263 885 aa22.37■■□□□ 1.17
RAPGEF3-208ENST00000476259 CDCA5Q96FF9 252 aa22.37■■□□□ 1.17
RAPGEF3-208ENST00000476259 FAM84BQ96KN1 310 aaPredicted RBP22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms