RNA–Protein interactions for RNA: ENST00000475969.5

DFFB-208, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 2,731 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-208ENST00000475969 ALS2Q96Q42 1657 aa18.69■□□□□ 0.58
DFFB-208ENST00000475969 SH3TC1Q8TE82 1336 aa18.69■□□□□ 0.58
DFFB-208ENST00000475969 POLR3DP05423 398 aaPredicted RBP18.69■□□□□ 0.58
DFFB-208ENST00000475969 CCAR1Q8IX12 1150 aaKnown RBP18.69■□□□□ 0.58
DFFB-208ENST00000475969 CEP126Q9P2H0 1117 aa18.69■□□□□ 0.58
DFFB-208ENST00000475969 RNF113AO15541 343 aaKnown RBP18.69■□□□□ 0.58
DFFB-208ENST00000475969 ADD1P35611 737 aaKnown RBP18.69■□□□□ 0.58
DFFB-208ENST00000475969 CCDC57Q2TAC2 916 aa18.69■□□□□ 0.58
DFFB-208ENST00000475969 TAF7LQ5H9L4 462 aa18.69■□□□□ 0.58
DFFB-208ENST00000475969 C11orf57Q6ZUT1 292 aaPredicted RBP18.69■□□□□ 0.58
DFFB-208ENST00000475969 KIAA1524Q8TCG1 905 aa18.69■□□□□ 0.58
DFFB-208ENST00000475969 SPATA31A3Q5VYP0 1347 aa18.68■□□□□ 0.58
DFFB-208ENST00000475969 PDIA3P30101 505 aaKnown RBP18.68■□□□□ 0.58
DFFB-208ENST00000475969 ME1P48163 572 aa18.68■□□□□ 0.58
DFFB-208ENST00000475969 TTC39AQ5SRH9 613 aa18.68■□□□□ 0.58
DFFB-208ENST00000475969 SMARCC2Q8TAQ2 1214 aa18.68■□□□□ 0.58
DFFB-208ENST00000475969 XAGE2Q96GT9 111 aa18.68■□□□□ 0.58
DFFB-208ENST00000475969 DYNC1I1O14576 645 aa18.67■□□□□ 0.58
DFFB-208ENST00000475969 ZAP70P43403 619 aa18.67■□□□□ 0.58
DFFB-208ENST00000475969 ARID5BQ14865 1188 aa18.67■□□□□ 0.58
DFFB-208ENST00000475969 HELLSQ9NRZ9 838 aa18.67■□□□□ 0.58
DFFB-208ENST00000475969 EXOSC10Q01780 885 aaKnown RBP18.67■□□□□ 0.58
DFFB-208ENST00000475969 PUS7LQ9H0K6 701 aaKnown RBP18.67■□□□□ 0.58
DFFB-208ENST00000475969 RXRAP19793 462 aa18.66■□□□□ 0.58
DFFB-208ENST00000475969 MYRIPQ8NFW9 859 aa18.66■□□□□ 0.58
DFFB-208ENST00000475969 CFAP45Q9UL16 551 aa18.66■□□□□ 0.58
DFFB-208ENST00000475969 ASAP1Q9ULH1 1129 aa18.66■□□□□ 0.58
DFFB-208ENST00000475969 TNS3Q68CZ2 1445 aa18.66■□□□□ 0.58
DFFB-208ENST00000475969 ILDR1Q86SU0 546 aaPredicted RBP18.66■□□□□ 0.58
DFFB-208ENST00000475969 CADPS2Q86UW7 1296 aa18.66■□□□□ 0.58
DFFB-208ENST00000475969 CCDC191Q8NCU4 936 aa18.66■□□□□ 0.58
DFFB-208ENST00000475969 NKX2-3Q8TAU0 364 aa18.66■□□□□ 0.58
DFFB-208ENST00000475969 DSCC1Q9BVC3 393 aa18.66■□□□□ 0.58
DFFB-208ENST00000475969 DNAJC10Q8IXB1 793 aa18.65■□□□□ 0.58
DFFB-208ENST00000475969 C16orf45Q96MC5 204 aaPredicted RBP18.65■□□□□ 0.58
DFFB-208ENST00000475969 PCDH11XQ9BZA7 1347 aa18.65■□□□□ 0.58
DFFB-208ENST00000475969 PCDH11YQ9BZA8 1340 aa18.65■□□□□ 0.58
DFFB-208ENST00000475969 COL18A1P39060 1754 aa18.65■□□□□ 0.58
DFFB-208ENST00000475969 LAMA4Q16363 1823 aa18.65■□□□□ 0.58
DFFB-208ENST00000475969 FOXP2O15409 715 aa18.65■□□□□ 0.58
DFFB-208ENST00000475969 FDPSP14324 419 aaKnown RBP18.65■□□□□ 0.58
DFFB-208ENST00000475969 CCDC144BQ3MJ40 725 aa18.65■□□□□ 0.58
DFFB-208ENST00000475969 CCDC144CPQ8IYA2 1237 aa18.65■□□□□ 0.58
DFFB-208ENST00000475969 ZSCAN16Q9H4T2 348 aaPredicted RBP18.65■□□□□ 0.58
DFFB-208ENST00000475969 A0A1B0GVL5 298 aa18.65■□□□□ 0.58
DFFB-208ENST00000475969 GOLGA6L6A8MZA4 724 aa18.65■□□□□ 0.58
DFFB-208ENST00000475969 FGAP02671 866 aa18.65■□□□□ 0.58
DFFB-208ENST00000475969 ZNF75DP51815 510 aa18.65■□□□□ 0.58
DFFB-208ENST00000475969 PALLDQ8WX93 1383 aa18.64■□□□□ 0.57
DFFB-208ENST00000475969 CCDC158Q5M9N0 1113 aa18.64■□□□□ 0.57
DFFB-208ENST00000475969 FSIP1Q8NA03 581 aa18.64■□□□□ 0.57
DFFB-208ENST00000475969 SPTLC3Q9NUV7 552 aa18.64■□□□□ 0.57
DFFB-208ENST00000475969 A0A0G2JS52 829 aa18.64■□□□□ 0.57
DFFB-208ENST00000475969 HMGB1P09429 215 aaKnown RBP18.64■□□□□ 0.57
DFFB-208ENST00000475969 BRINP3Q76B58 766 aa18.64■□□□□ 0.57
DFFB-208ENST00000475969 CLIP2Q9UDT6 1046 aa18.64■□□□□ 0.57
DFFB-208ENST00000475969 EVA1CP58658 441 aa18.63■□□□□ 0.57
DFFB-208ENST00000475969 WDR17Q8IZU2 1322 aa18.63■□□□□ 0.57
DFFB-208ENST00000475969 KIF1AQ12756 1690 aa18.63■□□□□ 0.57
DFFB-208ENST00000475969 KLF18A0A0U1RQI7 1052 aa18.63■□□□□ 0.57
DFFB-208ENST00000475969 ZNF710Q8N1W2 664 aa18.63■□□□□ 0.57
DFFB-208ENST00000475969 SNAP23O00161 211 aa18.62■□□□□ 0.57
DFFB-208ENST00000475969 RIOK3O14730 519 aaKnown RBP18.62■□□□□ 0.57
DFFB-208ENST00000475969 IL2RBP14784 551 aa18.62■□□□□ 0.57
DFFB-208ENST00000475969 SNW1Q13573 536 aaKnown RBP18.62■□□□□ 0.57
DFFB-208ENST00000475969 HLFQ16534 295 aa18.62■□□□□ 0.57
DFFB-208ENST00000475969 CCDC73Q6ZRK6 1079 aa18.62■□□□□ 0.57
DFFB-208ENST00000475969 CARMIL3Q8ND23 1372 aa18.62■□□□□ 0.57
DFFB-208ENST00000475969 ADAMTSL3P82987 1691 aa18.62■□□□□ 0.57
DFFB-208ENST00000475969 GOLGA8BA8MQT2 603 aa18.62■□□□□ 0.57
DFFB-208ENST00000475969 GOLGA6L19H0YKK7 550 aa18.62■□□□□ 0.57
DFFB-208ENST00000475969 PRC1O43663 620 aa18.62■□□□□ 0.57
DFFB-208ENST00000475969 ISM2Q6H9L7 571 aa18.62■□□□□ 0.57
DFFB-208ENST00000475969 RBM43Q6ZSC3 357 aaKnown RBP18.62■□□□□ 0.57
DFFB-208ENST00000475969 FILIP1Q7Z7B0 1213 aa18.62■□□□□ 0.57
DFFB-208ENST00000475969 STK11IPQ8N1F8 1099 aa18.62■□□□□ 0.57
DFFB-208ENST00000475969 HELBQ8NG08 1087 aaPredicted RBP18.62■□□□□ 0.57
DFFB-208ENST00000475969 CACTINQ8WUQ7 758 aaKnown RBP18.62■□□□□ 0.57
DFFB-208ENST00000475969 AIFM3Q96NN9 605 aa18.62■□□□□ 0.57
DFFB-208ENST00000475969 INCENPQ9NQS7 918 aa18.62■□□□□ 0.57
DFFB-208ENST00000475969 CLIC4Q9Y696 253 aa18.62■□□□□ 0.57
DFFB-208ENST00000475969 BIN1O00499 593 aa18.61■□□□□ 0.57
DFFB-208ENST00000475969 KINO60870 393 aaKnown RBP18.61■□□□□ 0.57
DFFB-208ENST00000475969 PDIA4P13667 645 aaKnown RBP18.61■□□□□ 0.57
DFFB-208ENST00000475969 SYTL4Q96C24 671 aaPredicted RBP18.61■□□□□ 0.57
DFFB-208ENST00000475969 RCOR1Q9UKL0 485 aa18.61■□□□□ 0.57
DFFB-208ENST00000475969 APPP05067 770 aa18.61■□□□□ 0.57
DFFB-208ENST00000475969 HMGN5P82970 282 aaKnown RBP18.61■□□□□ 0.57
DFFB-208ENST00000475969 TCIRG1Q13488 830 aa18.61■□□□□ 0.57
DFFB-208ENST00000475969 LLPHQ9BRT6 129 aaKnown RBP18.61■□□□□ 0.57
DFFB-208ENST00000475969 TMOD3Q9NYL9 352 aa18.61■□□□□ 0.57
DFFB-208ENST00000475969 GLI3P10071 1580 aa18.61■□□□□ 0.57
DFFB-208ENST00000475969 IFIT5Q13325 482 aaKnown RBP18.6■□□□□ 0.57
DFFB-208ENST00000475969 METTL24Q5JXM2 366 aa18.6■□□□□ 0.57
DFFB-208ENST00000475969 NAA16Q6N069 864 aaPredicted RBP18.6■□□□□ 0.57
DFFB-208ENST00000475969 ZSCAN25Q6NSZ9 544 aa18.6■□□□□ 0.57
DFFB-208ENST00000475969 PLA2G4DQ86XP0 818 aa18.6■□□□□ 0.57
DFFB-208ENST00000475969 TDRD7Q8NHU6 1098 aaKnown RBP18.6■□□□□ 0.57
DFFB-208ENST00000475969 GREM2Q9H772 168 aa18.6■□□□□ 0.57
DFFB-208ENST00000475969 PCDHA7Q9UN72 937 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms