RNA–Protein interactions for RNA: ENST00000475470.1

RPUSD3-215, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,413 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-215ENST00000475470 CCDC102BQ68D86 513 aa18.31■□□□□ 0.52
RPUSD3-215ENST00000475470 OSBP2Q969R2 916 aa18.31■□□□□ 0.52
RPUSD3-215ENST00000475470 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.31■□□□□ 0.52
RPUSD3-215ENST00000475470 UQCRFS1P1P0C7P4 283 aa18.31■□□□□ 0.52
RPUSD3-215ENST00000475470 SLC5A1P13866 664 aa18.31■□□□□ 0.52
RPUSD3-215ENST00000475470 HSPA1LP34931 641 aa18.31■□□□□ 0.52
RPUSD3-215ENST00000475470 CCNL1Q9UK58 526 aaPredicted RBP18.31■□□□□ 0.52
RPUSD3-215ENST00000475470 DDX49Q9Y6V7 483 aaKnown RBP18.31■□□□□ 0.52
RPUSD3-215ENST00000475470 RTL9Q8NET4 1388 aa18.31■□□□□ 0.52
RPUSD3-215ENST00000475470 AFF2P51816 1311 aa18.3■□□□□ 0.52
RPUSD3-215ENST00000475470 FGFR2P21802 821 aa18.3■□□□□ 0.52
RPUSD3-215ENST00000475470 TTF1Q15361 905 aaPredicted RBP18.3■□□□□ 0.52
RPUSD3-215ENST00000475470 NHSQ6T4R5 1651 aa18.3■□□□□ 0.52
RPUSD3-215ENST00000475470 RPS6KA4O75676 772 aa18.3■□□□□ 0.52
RPUSD3-215ENST00000475470 PHKA1P46020 1223 aa18.3■□□□□ 0.52
RPUSD3-215ENST00000475470 ZSCAN25Q6NSZ9 544 aa18.3■□□□□ 0.52
RPUSD3-215ENST00000475470 LAMB2P55268 1798 aa18.29■□□□□ 0.52
RPUSD3-215ENST00000475470 RGL2O15211 777 aa18.29■□□□□ 0.52
RPUSD3-215ENST00000475470 ERFEQ4G0M1 354 aa18.29■□□□□ 0.52
RPUSD3-215ENST00000475470 BICDL1Q6ZP65 573 aa18.29■□□□□ 0.52
RPUSD3-215ENST00000475470 NECAB1Q8N987 351 aa18.29■□□□□ 0.52
RPUSD3-215ENST00000475470 APPBP2Q92624 585 aa18.29■□□□□ 0.52
RPUSD3-215ENST00000475470 LMBRD1Q9NUN5 540 aa18.29■□□□□ 0.52
RPUSD3-215ENST00000475470 PRPF40AO75400 957 aaKnown RBP18.29■□□□□ 0.52
RPUSD3-215ENST00000475470 GTF2E1P29083 439 aaPredicted RBP18.29■□□□□ 0.52
RPUSD3-215ENST00000475470 ARID4AP29374 1257 aaPredicted RBP18.29■□□□□ 0.52
RPUSD3-215ENST00000475470 TOB2Q14106 344 aaPredicted RBP18.29■□□□□ 0.52
RPUSD3-215ENST00000475470 SMIM5Q71RC9 77 aa18.29■□□□□ 0.52
RPUSD3-215ENST00000475470 GNPATO15228 680 aa18.28■□□□□ 0.52
RPUSD3-215ENST00000475470 HMGB1P09429 215 aaKnown RBP18.28■□□□□ 0.52
RPUSD3-215ENST00000475470 KLHL40Q2TBA0 621 aa18.28■□□□□ 0.52
RPUSD3-215ENST00000475470 CDC5LQ99459 802 aaKnown RBP18.28■□□□□ 0.52
RPUSD3-215ENST00000475470 NARFQ9UHQ1 456 aa18.28■□□□□ 0.52
RPUSD3-215ENST00000475470 AKAP11Q9UKA4 1901 aa18.28■□□□□ 0.52
RPUSD3-215ENST00000475470 GJB2P29033 226 aa18.28■□□□□ 0.52
RPUSD3-215ENST00000475470 TBC1D9BQ66K14 1250 aa18.28■□□□□ 0.52
RPUSD3-215ENST00000475470 CHAMP1Q96JM3 812 aa18.28■□□□□ 0.52
RPUSD3-215ENST00000475470 RTN4Q9NQC3 1192 aaKnown RBP18.28■□□□□ 0.52
RPUSD3-215ENST00000475470 GOLGA6L3A6NEY3 463 aa18.27■□□□□ 0.52
RPUSD3-215ENST00000475470 ZPR1O75312 459 aa18.27■□□□□ 0.52
RPUSD3-215ENST00000475470 SYT1P21579 422 aa18.27■□□□□ 0.52
RPUSD3-215ENST00000475470 L1TD1Q5T7N2 865 aaKnown RBP18.27■□□□□ 0.52
RPUSD3-215ENST00000475470 TRPC5Q9UL62 973 aaPredicted RBP18.27■□□□□ 0.52
RPUSD3-215ENST00000475470 STX6O43752 255 aa18.27■□□□□ 0.51
RPUSD3-215ENST00000475470 ST3GAL1Q11201 340 aa18.27■□□□□ 0.51
RPUSD3-215ENST00000475470 STOX1Q6ZVD7 989 aa18.27■□□□□ 0.51
RPUSD3-215ENST00000475470 BCL2L12Q9HB09 334 aa18.27■□□□□ 0.51
RPUSD3-215ENST00000475470 CTNNA3Q9UI47 895 aa18.27■□□□□ 0.51
RPUSD3-215ENST00000475470 RTCBQ9Y3I0 505 aaKnown RBP18.27■□□□□ 0.51
RPUSD3-215ENST00000475470 SLC9C2Q5TAH2 1124 aa18.26■□□□□ 0.51
RPUSD3-215ENST00000475470 Q6ZUG5 572 aa18.26■□□□□ 0.51
RPUSD3-215ENST00000475470 PUS7LQ9H0K6 701 aaKnown RBP18.26■□□□□ 0.51
RPUSD3-215ENST00000475470 PIH1D3Q9NQM4 214 aaKnown RBP18.26■□□□□ 0.51
RPUSD3-215ENST00000475470 MYH7P12883 1935 aa18.26■□□□□ 0.51
RPUSD3-215ENST00000475470 SNAP23O00161 211 aa18.25■□□□□ 0.51
RPUSD3-215ENST00000475470 IDH1O75874 414 aaKnown RBP18.25■□□□□ 0.51
RPUSD3-215ENST00000475470 ZSCAN22P10073 491 aaPredicted RBP18.25■□□□□ 0.51
RPUSD3-215ENST00000475470 NCLP19338 710 aaKnown RBP18.25■□□□□ 0.51
RPUSD3-215ENST00000475470 ADD2P35612 726 aa18.25■□□□□ 0.51
RPUSD3-215ENST00000475470 FGD1P98174 961 aa18.25■□□□□ 0.51
RPUSD3-215ENST00000475470 SETDB2Q96T68 719 aa18.25■□□□□ 0.51
RPUSD3-215ENST00000475470 SRP68Q9UHB9 627 aaKnown RBP18.25■□□□□ 0.51
RPUSD3-215ENST00000475470 ARAP2Q8WZ64 1704 aa18.25■□□□□ 0.51
RPUSD3-215ENST00000475470 SCN7AQ01118 1682 aa18.25■□□□□ 0.51
RPUSD3-215ENST00000475470 ONECUT3O60422 494 aaPredicted RBP18.25■□□□□ 0.51
RPUSD3-215ENST00000475470 CHRNDQ07001 517 aa18.25■□□□□ 0.51
RPUSD3-215ENST00000475470 SF3B3Q15393 1217 aaKnown RBP18.25■□□□□ 0.51
RPUSD3-215ENST00000475470 DHX32Q7L7V1 743 aaKnown RBP18.25■□□□□ 0.51
RPUSD3-215ENST00000475470 ANKRD18AQ8IVF6 992 aa18.25■□□□□ 0.51
RPUSD3-215ENST00000475470 SEPT12Q8IYM1 358 aa18.25■□□□□ 0.51
RPUSD3-215ENST00000475470 SPATA5Q8NB90 893 aa18.24■□□□□ 0.51
RPUSD3-215ENST00000475470 NYXQ9GZU5 481 aa18.24■□□□□ 0.51
RPUSD3-215ENST00000475470 E7EWF7 191 aa18.24■□□□□ 0.51
RPUSD3-215ENST00000475470 GPAA1O43292 621 aa18.24■□□□□ 0.51
RPUSD3-215ENST00000475470 STK3Q13188 491 aa18.24■□□□□ 0.51
RPUSD3-215ENST00000475470 FOXD4L6Q3SYB3 417 aaPredicted RBP18.24■□□□□ 0.51
RPUSD3-215ENST00000475470 TTLL5Q6EMB2 1281 aa18.24■□□□□ 0.51
RPUSD3-215ENST00000475470 FOXD4L3Q6VB84 417 aaPredicted RBP18.24■□□□□ 0.51
RPUSD3-215ENST00000475470 A0A0G2JLW4 131 aa18.23■□□□□ 0.51
RPUSD3-215ENST00000475470 FSD2A1L4K1 749 aa18.23■□□□□ 0.51
RPUSD3-215ENST00000475470 ATRNO75882 1429 aa18.23■□□□□ 0.51
RPUSD3-215ENST00000475470 C3orf67Q6ZVT6 689 aa18.23■□□□□ 0.51
RPUSD3-215ENST00000475470 DTNBO60941 627 aa18.23■□□□□ 0.51
RPUSD3-215ENST00000475470 UBE3CQ15386 1083 aa18.23■□□□□ 0.51
RPUSD3-215ENST00000475470 IMMTQ16891 758 aaKnown RBP18.23■□□□□ 0.51
RPUSD3-215ENST00000475470 SLC10A5Q5PT55 438 aa18.23■□□□□ 0.51
RPUSD3-215ENST00000475470 BRPF3Q9ULD4 1205 aa18.23■□□□□ 0.51
RPUSD3-215ENST00000475470 RASGRF1Q13972 1273 aa18.22■□□□□ 0.51
RPUSD3-215ENST00000475470 NBPF5PQ86XG9 351 aaPredicted RBP18.22■□□□□ 0.51
RPUSD3-215ENST00000475470 LRRC2Q9BYS8 371 aa18.22■□□□□ 0.51
RPUSD3-215ENST00000475470 FGAP02671 866 aa18.22■□□□□ 0.51
RPUSD3-215ENST00000475470 AEBP2Q6ZN18 517 aaPredicted RBP18.22■□□□□ 0.51
RPUSD3-215ENST00000475470 ARHGEF1Q92888 912 aaKnown RBP18.22■□□□□ 0.51
RPUSD3-215ENST00000475470 BRF1Q92994 677 aa18.22■□□□□ 0.51
RPUSD3-215ENST00000475470 LAMA4Q16363 1823 aa18.22■□□□□ 0.51
RPUSD3-215ENST00000475470 ZNF532Q9HCE3 1301 aa18.21■□□□□ 0.51
RPUSD3-215ENST00000475470 FOXP2O15409 715 aa18.21■□□□□ 0.51
RPUSD3-215ENST00000475470 PDE6AP16499 860 aa18.21■□□□□ 0.51
RPUSD3-215ENST00000475470 BCAMP50895 628 aa18.21■□□□□ 0.51
RPUSD3-215ENST00000475470 ATP6V1DQ9Y5K8 247 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms