RNA–Protein interactions for RNA: ENST00000475432.6

HIF3A-207, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 1 (best)

Gene HIF3A, Length 2,004 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-207ENST00000475432 BCAMP50895 628 aa21.84■■□□□ 1.09
HIF3A-207ENST00000475432 DDRGK1Q96HY6 314 aa21.84■■□□□ 1.09
HIF3A-207ENST00000475432 CRAMP1Q96RY5 1269 aa21.84■■□□□ 1.09
HIF3A-207ENST00000475432 A0A0D9SFI3 127 aa21.83■■□□□ 1.09
HIF3A-207ENST00000475432 TICAM2Q86XR7 235 aa21.83■■□□□ 1.09
HIF3A-207ENST00000475432 PDE6BP35913 854 aa21.82■■□□□ 1.08
HIF3A-207ENST00000475432 RAD50Q92878 1312 aa21.82■■□□□ 1.08
HIF3A-207ENST00000475432 BBOX1O75936 387 aa21.82■■□□□ 1.08
HIF3A-207ENST00000475432 SRGNP10124 158 aa21.82■■□□□ 1.08
HIF3A-207ENST00000475432 KCNJ4P48050 445 aa21.82■■□□□ 1.08
HIF3A-207ENST00000475432 SLC51AQ86UW1 340 aa21.82■■□□□ 1.08
HIF3A-207ENST00000475432 KIF2CQ99661 725 aa21.82■■□□□ 1.08
HIF3A-207ENST00000475432 EPB41L2O43491 1005 aaKnown RBP21.81■■□□□ 1.08
HIF3A-207ENST00000475432 CHGBP05060 677 aa21.81■■□□□ 1.08
HIF3A-207ENST00000475432 RASGRF1Q13972 1273 aa21.81■■□□□ 1.08
HIF3A-207ENST00000475432 HMG20BQ9P0W2 317 aa21.81■■□□□ 1.08
HIF3A-207ENST00000475432 LSG1Q9H089 658 aaKnown RBP21.8■■□□□ 1.08
HIF3A-207ENST00000475432 ANKIB1Q9P2G1 1089 aa21.8■■□□□ 1.08
HIF3A-207ENST00000475432 A0A1B0GUL6 1792 aa21.8■■□□□ 1.08
HIF3A-207ENST00000475432 ZNF804BA4D1E1 1349 aa21.8■■□□□ 1.08
HIF3A-207ENST00000475432 CYP2E1P05181 493 aaPredicted RBP21.8■■□□□ 1.08
HIF3A-207ENST00000475432 GYG1P46976 350 aa21.8■■□□□ 1.08
HIF3A-207ENST00000475432 KIAA1211Q6ZU35 1233 aa21.8■■□□□ 1.08
HIF3A-207ENST00000475432 SPATA5Q8NB90 893 aa21.8■■□□□ 1.08
HIF3A-207ENST00000475432 ANKRD31Q8N7Z5 1873 aa21.8■■□□□ 1.08
HIF3A-207ENST00000475432 NPR1P16066 1061 aa21.79■■□□□ 1.08
HIF3A-207ENST00000475432 CAVIN4Q5BKX8 364 aa21.79■■□□□ 1.08
HIF3A-207ENST00000475432 XDHP47989 1333 aa21.79■■□□□ 1.08
HIF3A-207ENST00000475432 KLRK1P26718 216 aa21.79■■□□□ 1.08
HIF3A-207ENST00000475432 TTF1Q15361 905 aaPredicted RBP21.79■■□□□ 1.08
HIF3A-207ENST00000475432 FAM84BQ96KN1 310 aaPredicted RBP21.79■■□□□ 1.08
HIF3A-207ENST00000475432 MED23Q9ULK4 1368 aa21.78■■□□□ 1.08
HIF3A-207ENST00000475432 SLC16A10Q8TF71 515 aa21.78■■□□□ 1.08
HIF3A-207ENST00000475432 RNF113AO15541 343 aaKnown RBP21.77■■□□□ 1.08
HIF3A-207ENST00000475432 LRRFIP1Q32MZ4 808 aaKnown RBP21.77■■□□□ 1.08
HIF3A-207ENST00000475432 GNL3LQ9NVN8 582 aaKnown RBP21.77■■□□□ 1.08
HIF3A-207ENST00000475432 LEMD3Q9Y2U8 911 aa21.77■■□□□ 1.08
HIF3A-207ENST00000475432 TMC4Q7Z404 712 aa21.77■■□□□ 1.07
HIF3A-207ENST00000475432 ZNF589Q86UQ0 364 aaPredicted RBP21.77■■□□□ 1.07
HIF3A-207ENST00000475432 VPS37DQ86XT2 251 aa21.77■■□□□ 1.07
HIF3A-207ENST00000475432 MASTLQ96GX5 879 aa21.77■■□□□ 1.07
HIF3A-207ENST00000475432 PIH1D3Q9NQM4 214 aaKnown RBP21.77■■□□□ 1.07
HIF3A-207ENST00000475432 MCCP23508 829 aa21.76■■□□□ 1.07
HIF3A-207ENST00000475432 GPSM2P81274 684 aa21.76■■□□□ 1.07
HIF3A-207ENST00000475432 SLFNL1Q499Z3 407 aa21.76■■□□□ 1.07
HIF3A-207ENST00000475432 MCMDC2Q4G0Z9 681 aa21.76■■□□□ 1.07
HIF3A-207ENST00000475432 ZMYM1Q5SVZ6 1142 aa21.76■■□□□ 1.07
HIF3A-207ENST00000475432 FBXO33Q7Z6M2 555 aa21.76■■□□□ 1.07
HIF3A-207ENST00000475432 SEC62Q99442 399 aaKnown RBP21.76■■□□□ 1.07
HIF3A-207ENST00000475432 AKAP11Q9UKA4 1901 aa21.76■■□□□ 1.07
HIF3A-207ENST00000475432 PPEF1O14829 653 aaPredicted RBP21.75■■□□□ 1.07
HIF3A-207ENST00000475432 ALDH1B1P30837 517 aa21.75■■□□□ 1.07
HIF3A-207ENST00000475432 PTH1RQ03431 593 aa21.75■■□□□ 1.07
HIF3A-207ENST00000475432 HELLSQ9NRZ9 838 aa21.75■■□□□ 1.07
HIF3A-207ENST00000475432 NSFL1CQ9UNZ2 370 aaKnown RBP21.75■■□□□ 1.07
HIF3A-207ENST00000475432 IQSEC3Q9UPP2 1182 aaPredicted RBP21.75■■□□□ 1.07
HIF3A-207ENST00000475432 CCDC171Q6TFL3 1326 aa21.75■■□□□ 1.07
HIF3A-207ENST00000475432 IRS2Q9Y4H2 1338 aa21.75■■□□□ 1.07
HIF3A-207ENST00000475432 ZFYP08048 801 aaPredicted RBP21.75■■□□□ 1.07
HIF3A-207ENST00000475432 HSPA4P34932 840 aa21.74■■□□□ 1.07
HIF3A-207ENST00000475432 TXNRD3Q86VQ6 643 aa21.74■■□□□ 1.07
HIF3A-207ENST00000475432 C2CD5Q86YS7 1000 aa21.74■■□□□ 1.07
HIF3A-207ENST00000475432 UPF1Q92900 1129 aaKnown RBP eCLIP21.74■■□□□ 1.07
HIF3A-207ENST00000475432 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.74■■□□□ 1.07
HIF3A-207ENST00000475432 HIBADHP31937 336 aaKnown RBP21.73■■□□□ 1.07
HIF3A-207ENST00000475432 SP8Q8IXZ3 490 aa21.73■■□□□ 1.07
HIF3A-207ENST00000475432 PODXL2Q9NZ53 605 aa21.73■■□□□ 1.07
HIF3A-207ENST00000475432 H0YIN7 160 aa21.73■■□□□ 1.07
HIF3A-207ENST00000475432 IDH1O75874 414 aaKnown RBP21.73■■□□□ 1.07
HIF3A-207ENST00000475432 PALD1Q9ULE6 856 aa21.73■■□□□ 1.07
HIF3A-207ENST00000475432 ATP6V0A2Q9Y487 856 aa21.73■■□□□ 1.07
HIF3A-207ENST00000475432 ANAPC15P60006 121 aa21.72■■□□□ 1.07
HIF3A-207ENST00000475432 ZSCAN25Q6NSZ9 544 aa21.72■■□□□ 1.07
HIF3A-207ENST00000475432 CCDC129Q6ZRS4 1044 aa21.72■■□□□ 1.07
HIF3A-207ENST00000475432 MAP4K1Q92918 833 aa21.72■■□□□ 1.07
HIF3A-207ENST00000475432 UFL1O94874 794 aa21.72■■□□□ 1.07
HIF3A-207ENST00000475432 ATP2B4P23634 1241 aa21.72■■□□□ 1.07
HIF3A-207ENST00000475432 SLC9C2Q5TAH2 1124 aa21.72■■□□□ 1.07
HIF3A-207ENST00000475432 ZNF622Q969S3 477 aaKnown RBP eCLIP21.72■■□□□ 1.07
HIF3A-207ENST00000475432 GGA1Q9UJY5 639 aa21.72■■□□□ 1.07
HIF3A-207ENST00000475432 COL11A2P13942 1736 aaPredicted RBP21.71■■□□□ 1.07
HIF3A-207ENST00000475432 COL1A1P02452 1464 aaPredicted RBP21.71■■□□□ 1.07
HIF3A-207ENST00000475432 SEMA3EO15041 775 aa21.71■■□□□ 1.07
HIF3A-207ENST00000475432 BECN1Q14457 450 aa21.71■■□□□ 1.07
HIF3A-207ENST00000475432 RABEP1Q15276 862 aa21.71■■□□□ 1.07
HIF3A-207ENST00000475432 C15orf52Q6ZUT6 534 aaKnown RBP21.71■■□□□ 1.07
HIF3A-207ENST00000475432 OSBP2Q969R2 916 aa21.71■■□□□ 1.07
HIF3A-207ENST00000475432 DENND2AQ9ULE3 1009 aa21.71■■□□□ 1.07
HIF3A-207ENST00000475432 MAST3O60307 1309 aa21.71■■□□□ 1.07
HIF3A-207ENST00000475432 ADD2P35612 726 aa21.7■■□□□ 1.06
HIF3A-207ENST00000475432 SLC4A3P48751 1232 aa21.7■■□□□ 1.06
HIF3A-207ENST00000475432 WASHC4Q2M389 1173 aa21.7■■□□□ 1.06
HIF3A-207ENST00000475432 STYK1Q6J9G0 422 aa21.7■■□□□ 1.06
HIF3A-207ENST00000475432 APPBP2Q92624 585 aa21.7■■□□□ 1.06
HIF3A-207ENST00000475432 IL17RAQ96F46 866 aa21.7■■□□□ 1.06
HIF3A-207ENST00000475432 TBC1D2Q9BYX2 928 aa21.7■■□□□ 1.06
HIF3A-207ENST00000475432 WWC3Q9ULE0 1092 aa21.7■■□□□ 1.06
HIF3A-207ENST00000475432 M0R2C6 588 aa21.69■■□□□ 1.06
HIF3A-207ENST00000475432 FRAT2O75474 233 aaPredicted RBP21.69■■□□□ 1.06
HIF3A-207ENST00000475432 CHRNA5P30532 468 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms