RNA–Protein interactions for RNA: ENST00000475403.2

LSAMP-204, Transcript of limbic system associated membrane protein, humanhuman

TSL 3

Gene LSAMP, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-204ENST00000475403 USP17L1Q7RTZ2 530 aa8.83□□□□□ -1
LSAMP-204ENST00000475403 APOBEC3FQ8IUX4 373 aaKnown RBP8.83□□□□□ -1
LSAMP-204ENST00000475403 XAGE3Q8WTP9 111 aa8.83□□□□□ -1
LSAMP-204ENST00000475403 DPF3Q92784 378 aa8.83□□□□□ -1
LSAMP-204ENST00000475403 SLC10A4Q96EP9 437 aa8.83□□□□□ -1
LSAMP-204ENST00000475403 TSPYL4Q9UJ04 414 aa8.83□□□□□ -1
LSAMP-204ENST00000475403 PSME4Q14997 1843 aa8.82□□□□□ -1
LSAMP-204ENST00000475403 ZBTB48P10074 688 aaPredicted RBP8.82□□□□□ -1
LSAMP-204ENST00000475403 RPS8P62241 208 aaKnown RBP8.82□□□□□ -1
LSAMP-204ENST00000475403 SP3Q02447 781 aa8.82□□□□□ -1
LSAMP-204ENST00000475403 CRHR2Q13324 411 aa8.82□□□□□ -1
LSAMP-204ENST00000475403 PROSER3Q2NL68 480 aa8.82□□□□□ -1
LSAMP-204ENST00000475403 RTL5Q5HYW3 569 aaPredicted RBP8.82□□□□□ -1
LSAMP-204ENST00000475403 COPS6Q7L5N1 327 aa8.82□□□□□ -1
LSAMP-204ENST00000475403 OTUD5Q96G74 571 aa8.82□□□□□ -1
LSAMP-204ENST00000475403 ZNF333Q96JL9 665 aa8.82□□□□□ -1
LSAMP-204ENST00000475403 RBM27Q9P2N5 1060 aaKnown RBP8.82□□□□□ -1
LSAMP-204ENST00000475403 DLG5Q8TDM6 1919 aa8.82□□□□□ -1
LSAMP-204ENST00000475403 PER1O15534 1290 aaPredicted RBP8.81□□□□□ -1
LSAMP-204ENST00000475403 SASH1O94885 1247 aa8.81□□□□□ -1
LSAMP-204ENST00000475403 SF3B3Q15393 1217 aaKnown RBP8.81□□□□□ -1
LSAMP-204ENST00000475403 FAM89AQ96GI7 184 aa8.81□□□□□ -1
LSAMP-204ENST00000475403 PODXL2Q9NZ53 605 aa8.81□□□□□ -1
LSAMP-204ENST00000475403 MYO3BQ8WXR4 1341 aa8.8□□□□□ -1
LSAMP-204ENST00000475403 MAPK8IP3Q9UPT6 1336 aa8.8□□□□□ -1
LSAMP-204ENST00000475403 IGF2BP3O00425 579 aaKnown RBP eCLIP8.8□□□□□ -1
LSAMP-204ENST00000475403 WNT10BO00744 389 aa8.8□□□□□ -1
LSAMP-204ENST00000475403 PPP1R12BO60237 982 aaPredicted RBP8.8□□□□□ -1
LSAMP-204ENST00000475403 HSP90B1P14625 803 aaKnown RBP8.8□□□□□ -1
LSAMP-204ENST00000475403 PODNQ7Z5L7 613 aa8.8□□□□□ -1
LSAMP-204ENST00000475403 WNK4Q96J92 1243 aa8.8□□□□□ -1
LSAMP-204ENST00000475403 PTCH2Q9Y6C5 1203 aa8.8□□□□□ -1
LSAMP-204ENST00000475403 XDHP47989 1333 aa8.8□□□□□ -1
LSAMP-204ENST00000475403 COL1A1P02452 1464 aaPredicted RBP8.79□□□□□ -1
LSAMP-204ENST00000475403 IRS4O14654 1257 aaPredicted RBP8.79□□□□□ -1
LSAMP-204ENST00000475403 WDHD1O75717 1129 aaPredicted RBP8.79□□□□□ -1
LSAMP-204ENST00000475403 MNX1P50219 401 aaPredicted RBP8.79□□□□□ -1
LSAMP-204ENST00000475403 PDIA6Q15084 440 aa8.79□□□□□ -1
LSAMP-204ENST00000475403 LDLRAD1Q5T700 205 aa8.79□□□□□ -1
LSAMP-204ENST00000475403 LRP10Q7Z4F1 713 aa8.79□□□□□ -1
LSAMP-204ENST00000475403 GMLQ99445 158 aa8.79□□□□□ -1
LSAMP-204ENST00000475403 HTATIP2Q9BUP3 242 aa8.79□□□□□ -1
LSAMP-204ENST00000475403 FZD1Q9UP38 647 aa8.79□□□□□ -1
LSAMP-204ENST00000475403 COL6A3P12111 3177 aa8.79□□□□□ -1
LSAMP-204ENST00000475403 COL4A1P02462 1669 aa8.78□□□□□ -1
LSAMP-204ENST00000475403 A0A0C4DFX4 3053 aa8.78□□□□□ -1
LSAMP-204ENST00000475403 ATP5J2-PTCD1G3V325 749 aa8.78□□□□□ -1
LSAMP-204ENST00000475403 ATP2B4P23634 1241 aa8.78□□□□□ -1
LSAMP-204ENST00000475403 IREB2P48200 963 aaKnown RBP8.78□□□□□ -1
LSAMP-204ENST00000475403 KIF22Q14807 665 aa8.78□□□□□ -1
LSAMP-204ENST00000475403 CCDC152Q4G0S7 254 aa8.78□□□□□ -1
LSAMP-204ENST00000475403 CLMNQ96JQ2 1002 aa8.78□□□□□ -1
LSAMP-204ENST00000475403 NR2E3Q9Y5X4 410 aa8.78□□□□□ -1
LSAMP-204ENST00000475403 CUL9Q8IWT3 2517 aa8.78□□□□□ -1
LSAMP-204ENST00000475403 RANBP2P49792 3224 aaKnown RBP8.77□□□□□ -1.01
LSAMP-204ENST00000475403 MYO1BO43795 1136 aa8.77□□□□□ -1.01
LSAMP-204ENST00000475403 MMP14P50281 582 aa8.77□□□□□ -1.01
LSAMP-204ENST00000475403 TAF1CQ15572 869 aaPredicted RBP8.77□□□□□ -1.01
LSAMP-204ENST00000475403 NFE2L2Q16236 605 aa8.77□□□□□ -1.01
LSAMP-204ENST00000475403 ANKRD18AQ8IVF6 992 aa8.77□□□□□ -1.01
LSAMP-204ENST00000475403 PLBD2Q8NHP8 589 aa8.77□□□□□ -1.01
LSAMP-204ENST00000475403 SH3TC2Q8TF17 1288 aa8.77□□□□□ -1.01
LSAMP-204ENST00000475403 CCDC85AQ96PX6 553 aaPredicted RBP8.77□□□□□ -1.01
LSAMP-204ENST00000475403 MXD3Q9BW11 206 aa8.77□□□□□ -1.01
LSAMP-204ENST00000475403 DEFB129Q9H1M3 183 aa8.77□□□□□ -1.01
LSAMP-204ENST00000475403 SEC31BQ9NQW1 1179 aa8.77□□□□□ -1.01
LSAMP-204ENST00000475403 NOP58Q9Y2X3 529 aaKnown RBP8.77□□□□□ -1.01
LSAMP-204ENST00000475403 SALL2Q9Y467 1007 aaPredicted RBP8.77□□□□□ -1.01
LSAMP-204ENST00000475403 LAMB1P07942 1786 aa8.76□□□□□ -1.01
LSAMP-204ENST00000475403 MED23Q9ULK4 1368 aa8.76□□□□□ -1.01
LSAMP-204ENST00000475403 SUPT20HL1Q3ZLR7 823 aa8.76□□□□□ -1.01
LSAMP-204ENST00000475403 DACT2Q5SW24 774 aa8.76□□□□□ -1.01
LSAMP-204ENST00000475403 STRIP1Q5VSL9 837 aa8.76□□□□□ -1.01
LSAMP-204ENST00000475403 ANKRD13DQ6ZTN6 518 aa8.76□□□□□ -1.01
LSAMP-204ENST00000475403 KIAA0825Q8IV33 1275 aa8.76□□□□□ -1.01
LSAMP-204ENST00000475403 NKX2-3Q8TAU0 364 aa8.76□□□□□ -1.01
LSAMP-204ENST00000475403 PNNQ9H307 717 aaKnown RBP8.76□□□□□ -1.01
LSAMP-204ENST00000475403 ZFYVE28Q9HCC9 887 aa8.76□□□□□ -1.01
LSAMP-204ENST00000475403 CHPF2Q9P2E5 772 aa8.76□□□□□ -1.01
LSAMP-204ENST00000475403 PPP2R3BQ9Y5P8 575 aa8.76□□□□□ -1.01
LSAMP-204ENST00000475403 WTIPA6NIX2 430 aaPredicted RBP8.75□□□□□ -1.01
LSAMP-204ENST00000475403 UNCXA6NJT0 531 aa8.75□□□□□ -1.01
LSAMP-204ENST00000475403 PPP2R1AP30153 589 aa8.75□□□□□ -1.01
LSAMP-204ENST00000475403 DLGAP5Q15398 846 aa8.75□□□□□ -1.01
LSAMP-204ENST00000475403 MAP3K11Q16584 847 aa8.75□□□□□ -1.01
LSAMP-204ENST00000475403 HDGFL1Q5TGJ6 251 aa8.75□□□□□ -1.01
LSAMP-204ENST00000475403 ANKRD13AQ8IZ07 590 aa8.75□□□□□ -1.01
LSAMP-204ENST00000475403 ZBTB38Q8NAP3 1195 aaPredicted RBP8.75□□□□□ -1.01
LSAMP-204ENST00000475403 CDC5LQ99459 802 aaKnown RBP8.75□□□□□ -1.01
LSAMP-204ENST00000475403 ISCA1Q9BUE6 129 aa8.75□□□□□ -1.01
LSAMP-204ENST00000475403 VEZTQ9HBM0 779 aa8.75□□□□□ -1.01
LSAMP-204ENST00000475403 A0A1W2PPC1 479 aa8.74□□□□□ -1.01
LSAMP-204ENST00000475403 GOLGA2Q08379 1002 aa8.74□□□□□ -1.01
LSAMP-204ENST00000475403 TTLL5Q6EMB2 1281 aa8.74□□□□□ -1.01
LSAMP-204ENST00000475403 OPTNQ96CV9 577 aa8.74□□□□□ -1.01
LSAMP-204ENST00000475403 COA1Q9GZY4 146 aa8.74□□□□□ -1.01
LSAMP-204ENST00000475403 ELP3Q9H9T3 547 aa8.74□□□□□ -1.01
LSAMP-204ENST00000475403 SSC5DA1L4H1 1573 aa8.73□□□□□ -1.01
LSAMP-204ENST00000475403 SPEF2Q9C093 1822 aa8.73□□□□□ -1.01
LSAMP-204ENST00000475403 CCL15-CCL14A0A0B4J2E2 113 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms