RNA–Protein interactions for RNA: ENST00000475339.1

ATG9A-220, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 812 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-220ENST00000475339 WNK4Q96J92 1243 aa18.43■□□□□ 0.54
ATG9A-220ENST00000475339 PODXL2Q9NZ53 605 aa18.43■□□□□ 0.54
ATG9A-220ENST00000475339 ANKIB1Q9P2G1 1089 aa18.43■□□□□ 0.54
ATG9A-220ENST00000475339 USP17L3A6NCW0 530 aa18.42■□□□□ 0.54
ATG9A-220ENST00000475339 USP17L4A6NCW7 530 aa18.42■□□□□ 0.54
ATG9A-220ENST00000475339 SOX1O00570 391 aaPredicted RBP18.42■□□□□ 0.54
ATG9A-220ENST00000475339 ZBTB48P10074 688 aaPredicted RBP18.42■□□□□ 0.54
ATG9A-220ENST00000475339 PPP2R1AP30153 589 aa18.42■□□□□ 0.54
ATG9A-220ENST00000475339 USP17L1Q7RTZ2 530 aa18.42■□□□□ 0.54
ATG9A-220ENST00000475339 FAM89AQ96GI7 184 aa18.42■□□□□ 0.54
ATG9A-220ENST00000475339 CLMNQ96JQ2 1002 aa18.42■□□□□ 0.54
ATG9A-220ENST00000475339 MXD3Q9BW11 206 aa18.42■□□□□ 0.54
ATG9A-220ENST00000475339 GGA1Q9UJY5 639 aa18.42■□□□□ 0.54
ATG9A-220ENST00000475339 NUDCQ9Y266 331 aa18.42■□□□□ 0.54
ATG9A-220ENST00000475339 SASH1O94885 1247 aa18.41■□□□□ 0.54
ATG9A-220ENST00000475339 XAGE3Q8WTP9 111 aa18.41■□□□□ 0.54
ATG9A-220ENST00000475339 LRCH3Q96II8 777 aa18.41■□□□□ 0.54
ATG9A-220ENST00000475339 OTUD7BQ6GQQ9 843 aa18.4■□□□□ 0.54
ATG9A-220ENST00000475339 ZNF316A6NFI3 1004 aaPredicted RBP18.39■□□□□ 0.53
ATG9A-220ENST00000475339 RTL5Q5HYW3 569 aaPredicted RBP18.39■□□□□ 0.53
ATG9A-220ENST00000475339 OGFOD1Q8N543 542 aa18.39■□□□□ 0.53
ATG9A-220ENST00000475339 SH3TC2Q8TF17 1288 aa18.39■□□□□ 0.53
ATG9A-220ENST00000475339 PTPN18Q99952 460 aa18.39■□□□□ 0.53
ATG9A-220ENST00000475339 RALBP1Q15311 655 aa18.38■□□□□ 0.53
ATG9A-220ENST00000475339 PODNQ7Z5L7 613 aa18.38■□□□□ 0.53
ATG9A-220ENST00000475339 PSME4Q14997 1843 aa18.37■□□□□ 0.53
ATG9A-220ENST00000475339 APOBEC3FQ8IUX4 373 aaKnown RBP18.37■□□□□ 0.53
ATG9A-220ENST00000475339 SHISA4Q96DD7 197 aa18.37■□□□□ 0.53
ATG9A-220ENST00000475339 SEC31BQ9NQW1 1179 aa18.37■□□□□ 0.53
ATG9A-220ENST00000475339 GJA5P36382 358 aa18.36■□□□□ 0.53
ATG9A-220ENST00000475339 MAP3K11Q16584 847 aa18.36■□□□□ 0.53
ATG9A-220ENST00000475339 COL25A1Q9BXS0 654 aaPredicted RBP18.36■□□□□ 0.53
ATG9A-220ENST00000475339 ARHGEF6Q15052 776 aa18.35■□□□□ 0.53
ATG9A-220ENST00000475339 DACT2Q5SW24 774 aa18.35■□□□□ 0.53
ATG9A-220ENST00000475339 UNC80Q8N2C7 3258 aa18.34■□□□□ 0.53
ATG9A-220ENST00000475339 ATP5J2-PTCD1G3V325 749 aa18.34■□□□□ 0.53
ATG9A-220ENST00000475339 FBXW7Q969H0 707 aa18.34■□□□□ 0.53
ATG9A-220ENST00000475339 DEFB129Q9H1M3 183 aa18.34■□□□□ 0.53
ATG9A-220ENST00000475339 TESPA1A2RU30 521 aaPredicted RBP18.33■□□□□ 0.52
ATG9A-220ENST00000475339 IRS4O14654 1257 aaPredicted RBP18.33■□□□□ 0.52
ATG9A-220ENST00000475339 PPP1R12BO60237 982 aaPredicted RBP18.33■□□□□ 0.52
ATG9A-220ENST00000475339 ISCA1Q9BUE6 129 aa18.33■□□□□ 0.52
ATG9A-220ENST00000475339 TSPYL4Q9UJ04 414 aa18.33■□□□□ 0.52
ATG9A-220ENST00000475339 NR2E3Q9Y5X4 410 aa18.33■□□□□ 0.52
ATG9A-220ENST00000475339 A0A1W2PPC1 479 aa18.32■□□□□ 0.52
ATG9A-220ENST00000475339 MTFR1Q15390 333 aa18.32■□□□□ 0.52
ATG9A-220ENST00000475339 HTATIP2Q9BUP3 242 aa18.32■□□□□ 0.52
ATG9A-220ENST00000475339 XDHP47989 1333 aa18.31■□□□□ 0.52
ATG9A-220ENST00000475339 SSC5DA1L4H1 1573 aa18.31■□□□□ 0.52
ATG9A-220ENST00000475339 ZBTB7BO15156 539 aaPredicted RBP18.31■□□□□ 0.52
ATG9A-220ENST00000475339 UBE2Q1Q7Z7E8 422 aa18.31■□□□□ 0.52
ATG9A-220ENST00000475339 ARHGAP39Q9C0H5 1083 aa18.31■□□□□ 0.52
ATG9A-220ENST00000475339 MYO3BQ8WXR4 1341 aa18.3■□□□□ 0.52
ATG9A-220ENST00000475339 MYBBP1AQ9BQG0 1328 aaKnown RBP18.3■□□□□ 0.52
ATG9A-220ENST00000475339 KIAA0825Q8IV33 1275 aa18.3■□□□□ 0.52
ATG9A-220ENST00000475339 ZBED3Q96IU2 234 aaPredicted RBP18.3■□□□□ 0.52
ATG9A-220ENST00000475339 LAMB1P07942 1786 aa18.3■□□□□ 0.52
ATG9A-220ENST00000475339 UNCXA6NJT0 531 aa18.29■□□□□ 0.52
ATG9A-220ENST00000475339 ATP2B4P23634 1241 aa18.29■□□□□ 0.52
ATG9A-220ENST00000475339 TAF1CQ15572 869 aaPredicted RBP18.29■□□□□ 0.52
ATG9A-220ENST00000475339 STRIP1Q5VSL9 837 aa18.29■□□□□ 0.52
ATG9A-220ENST00000475339 DEFB123Q8N688 67 aa18.29■□□□□ 0.52
ATG9A-220ENST00000475339 ZFYVE28Q9HCC9 887 aa18.29■□□□□ 0.52
ATG9A-220ENST00000475339 DLG5Q8TDM6 1919 aa18.29■□□□□ 0.52
ATG9A-220ENST00000475339 Q7L0L9 218 aa18.28■□□□□ 0.52
ATG9A-220ENST00000475339 PLBD2Q8NHP8 589 aa18.28■□□□□ 0.52
ATG9A-220ENST00000475339 MS4A4AQ96JQ5 239 aa18.28■□□□□ 0.52
ATG9A-220ENST00000475339 CCDC85AQ96PX6 553 aaPredicted RBP18.28■□□□□ 0.52
ATG9A-220ENST00000475339 STAP2Q9UGK3 403 aa18.28■□□□□ 0.52
ATG9A-220ENST00000475339 STXBP5LQ9Y2K9 1186 aa18.28■□□□□ 0.52
ATG9A-220ENST00000475339 VCANP13611 3396 aa18.27■□□□□ 0.52
ATG9A-220ENST00000475339 USP2O75604 605 aaPredicted RBP18.27■□□□□ 0.52
ATG9A-220ENST00000475339 NEFMP07197 916 aa18.27■□□□□ 0.52
ATG9A-220ENST00000475339 ANKRD13DQ6ZTN6 518 aa18.27■□□□□ 0.52
ATG9A-220ENST00000475339 BRI3BPQ8WY22 251 aa18.27■□□□□ 0.52
ATG9A-220ENST00000475339 OPTNQ96CV9 577 aa18.27■□□□□ 0.52
ATG9A-220ENST00000475339 COL1A1P02452 1464 aaPredicted RBP18.26■□□□□ 0.51
ATG9A-220ENST00000475339 IREB2P48200 963 aaKnown RBP18.26■□□□□ 0.51
ATG9A-220ENST00000475339 NFE2L2Q16236 605 aa18.26■□□□□ 0.51
ATG9A-220ENST00000475339 SUPT20HL1Q3ZLR7 823 aa18.26■□□□□ 0.51
ATG9A-220ENST00000475339 NBPF12Q5TAG4 269 aaPredicted RBP18.26■□□□□ 0.51
ATG9A-220ENST00000475339 ANKRD13AQ8IZ07 590 aa18.26■□□□□ 0.51
ATG9A-220ENST00000475339 NKX2-3Q8TAU0 364 aa18.26■□□□□ 0.51
ATG9A-220ENST00000475339 ELP3Q9H9T3 547 aa18.26■□□□□ 0.51
ATG9A-220ENST00000475339 ECM2O94769 699 aaPredicted RBP18.25■□□□□ 0.51
ATG9A-220ENST00000475339 GJA8P48165 433 aa18.25■□□□□ 0.51
ATG9A-220ENST00000475339 MMP14P50281 582 aa18.25■□□□□ 0.51
ATG9A-220ENST00000475339 LACTBP83111 547 aaPredicted RBP18.25■□□□□ 0.51
ATG9A-220ENST00000475339 FAM43AQ8N2R8 423 aa18.25■□□□□ 0.51
ATG9A-220ENST00000475339 PRKRIP1Q9H875 184 aaPredicted RBP18.25■□□□□ 0.51
ATG9A-220ENST00000475339 CHPF2Q9P2E5 772 aa18.25■□□□□ 0.51
ATG9A-220ENST00000475339 MED23Q9ULK4 1368 aa18.25■□□□□ 0.51
ATG9A-220ENST00000475339 ZSWIM8A7E2V4 1837 aa18.24■□□□□ 0.51
ATG9A-220ENST00000475339 CCL15-CCL14A0A0B4J2E2 113 aa18.24■□□□□ 0.51
ATG9A-220ENST00000475339 CCL15Q16663 113 aa18.24■□□□□ 0.51
ATG9A-220ENST00000475339 CCDC152Q4G0S7 254 aa18.24■□□□□ 0.51
ATG9A-220ENST00000475339 TTLL5Q6EMB2 1281 aa18.24■□□□□ 0.51
ATG9A-220ENST00000475339 ANKRD18AQ8IVF6 992 aa18.24■□□□□ 0.51
ATG9A-220ENST00000475339 CNKSR2Q8WXI2 1034 aa18.24■□□□□ 0.51
ATG9A-220ENST00000475339 PCDHAC2Q9Y5I4 1007 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms