RNA–Protein interactions for RNA: ENST00000475235.1

HLA-DOB-208, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 1,514 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-208ENST00000475235 LEMD3Q9Y2U8 911 aa14.5□□□□□ -0.09
HLA-DOB-208ENST00000475235 MED23Q9ULK4 1368 aa14.49□□□□□ -0.09
HLA-DOB-208ENST00000475235 H7C1D1 291 aa14.49□□□□□ -0.09
HLA-DOB-208ENST00000475235 CCT4P50991 539 aaKnown RBP14.49□□□□□ -0.09
HLA-DOB-208ENST00000475235 CCDC57Q2TAC2 916 aa14.49□□□□□ -0.09
HLA-DOB-208ENST00000475235 LMBR1LQ6UX01 489 aa14.49□□□□□ -0.09
HLA-DOB-208ENST00000475235 PODNQ7Z5L7 613 aa14.49□□□□□ -0.09
HLA-DOB-208ENST00000475235 CHMP3Q9Y3E7 222 aa14.49□□□□□ -0.09
HLA-DOB-208ENST00000475235 ADAMTSL1Q8N6G6 1762 aa14.49□□□□□ -0.09
HLA-DOB-208ENST00000475235 UTYO14607 1347 aa14.48□□□□□ -0.09
HLA-DOB-208ENST00000475235 ZC3H15Q8WU90 426 aaKnown RBP14.48□□□□□ -0.09
HLA-DOB-208ENST00000475235 ZMYND15Q9H091 742 aa14.48□□□□□ -0.09
HLA-DOB-208ENST00000475235 CNOT7Q9UIV1 285 aaKnown RBP14.48□□□□□ -0.09
HLA-DOB-208ENST00000475235 MICALL2Q8IY33 904 aa14.47□□□□□ -0.09
HLA-DOB-208ENST00000475235 ZNF804BA4D1E1 1349 aa14.47□□□□□ -0.09
HLA-DOB-208ENST00000475235 TMEM88BA6NKF7 163 aa14.46□□□□□ -0.09
HLA-DOB-208ENST00000475235 VIL1P09327 827 aaKnown RBP14.46□□□□□ -0.09
HLA-DOB-208ENST00000475235 KCNJ4P48050 445 aa14.46□□□□□ -0.09
HLA-DOB-208ENST00000475235 BRPF1P55201 1214 aaPredicted RBP14.46□□□□□ -0.09
HLA-DOB-208ENST00000475235 EPHA10Q5JZY3 1008 aa14.46□□□□□ -0.09
HLA-DOB-208ENST00000475235 JMYQ8N9B5 988 aa14.46□□□□□ -0.09
HLA-DOB-208ENST00000475235 ARID3AQ99856 593 aa14.46□□□□□ -0.09
HLA-DOB-208ENST00000475235 NBPF7P0C2Y1 421 aaPredicted RBP14.46□□□□□ -0.1
HLA-DOB-208ENST00000475235 CHRNDQ07001 517 aa14.46□□□□□ -0.1
HLA-DOB-208ENST00000475235 SUCLG2Q96I99 432 aa14.46□□□□□ -0.1
HLA-DOB-208ENST00000475235 CCDC136Q96JN2 1154 aa14.46□□□□□ -0.1
HLA-DOB-208ENST00000475235 COA1Q9GZY4 146 aa14.46□□□□□ -0.1
HLA-DOB-208ENST00000475235 KCNQ5Q9NR82 932 aa14.46□□□□□ -0.1
HLA-DOB-208ENST00000475235 PGAP2Q9UHJ9 254 aa14.46□□□□□ -0.1
HLA-DOB-208ENST00000475235 RSBN1LQ6PCB5 846 aaPredicted RBP14.45□□□□□ -0.1
HLA-DOB-208ENST00000475235 LDHAL6AQ6ZMR3 332 aa14.45□□□□□ -0.1
HLA-DOB-208ENST00000475235 AGBL3Q8NEM8 1001 aa14.45□□□□□ -0.1
HLA-DOB-208ENST00000475235 API5Q9BZZ5 524 aaKnown RBP14.45□□□□□ -0.1
HLA-DOB-208ENST00000475235 ZNF609O15014 1411 aa14.45□□□□□ -0.1
HLA-DOB-208ENST00000475235 USP17L3A6NCW0 530 aa14.44□□□□□ -0.1
HLA-DOB-208ENST00000475235 USP17L4A6NCW7 530 aa14.44□□□□□ -0.1
HLA-DOB-208ENST00000475235 RABL6Q3YEC7 729 aaPredicted RBP14.44□□□□□ -0.1
HLA-DOB-208ENST00000475235 USP17L1Q7RTZ2 530 aa14.44□□□□□ -0.1
HLA-DOB-208ENST00000475235 CNNM1Q9NRU3 951 aa14.44□□□□□ -0.1
HLA-DOB-208ENST00000475235 MYH3P11055 1940 aa14.44□□□□□ -0.1
HLA-DOB-208ENST00000475235 KIF16BQ96L93 1317 aa14.43□□□□□ -0.1
HLA-DOB-208ENST00000475235 HIRAP54198 1017 aaPredicted RBP14.43□□□□□ -0.1
HLA-DOB-208ENST00000475235 HNRNPUQ00839 825 aaKnown RBP eCLIP14.43□□□□□ -0.1
HLA-DOB-208ENST00000475235 TRPM4Q8TD43 1214 aa14.43□□□□□ -0.1
HLA-DOB-208ENST00000475235 KAZALD1Q96I82 304 aa14.43□□□□□ -0.1
HLA-DOB-208ENST00000475235 NOB1Q9ULX3 412 aaKnown RBP14.43□□□□□ -0.1
HLA-DOB-208ENST00000475235 MYO3BQ8WXR4 1341 aa14.43□□□□□ -0.1
HLA-DOB-208ENST00000475235 WTIPA6NIX2 430 aaPredicted RBP14.42□□□□□ -0.1
HLA-DOB-208ENST00000475235 RARSP54136 660 aaKnown RBP14.42□□□□□ -0.1
HLA-DOB-208ENST00000475235 C15orf52Q6ZUT6 534 aaKnown RBP14.42□□□□□ -0.1
HLA-DOB-208ENST00000475235 CDC37L1Q7L3B6 337 aa14.42□□□□□ -0.1
HLA-DOB-208ENST00000475235 SAMD7Q7Z3H4 446 aa14.42□□□□□ -0.1
HLA-DOB-208ENST00000475235 USP44Q9H0E7 712 aa14.42□□□□□ -0.1
HLA-DOB-208ENST00000475235 BICC1Q9H694 974 aaKnown RBP14.42□□□□□ -0.1
HLA-DOB-208ENST00000475235 TSHZ2Q9NRE2 1034 aa14.42□□□□□ -0.1
HLA-DOB-208ENST00000475235 SHTN1A0MZ66 631 aa14.41□□□□□ -0.1
HLA-DOB-208ENST00000475235 TAF5LO75529 589 aa14.41□□□□□ -0.1
HLA-DOB-208ENST00000475235 ZNF280AP59817 542 aaPredicted RBP14.41□□□□□ -0.1
HLA-DOB-208ENST00000475235 KIF4BQ2VIQ3 1234 aa14.41□□□□□ -0.1
HLA-DOB-208ENST00000475235 TBC1D10BQ4KMP7 808 aaPredicted RBP14.41□□□□□ -0.1
HLA-DOB-208ENST00000475235 STRIP1Q5VSL9 837 aa14.41□□□□□ -0.1
HLA-DOB-208ENST00000475235 ARHGAP45Q92619 1136 aa14.41□□□□□ -0.1
HLA-DOB-208ENST00000475235 ZNF594Q96JF6 807 aaPredicted RBP14.41□□□□□ -0.1
HLA-DOB-208ENST00000475235 MKRN1Q9UHC7 482 aaKnown RBP14.41□□□□□ -0.1
HLA-DOB-208ENST00000475235 HDAC5Q9UQL6 1122 aa14.41□□□□□ -0.1
HLA-DOB-208ENST00000475235 CNTNAP1P78357 1384 aa14.41□□□□□ -0.1
HLA-DOB-208ENST00000475235 USP17L8P0C7I0 530 aa14.41□□□□□ -0.1
HLA-DOB-208ENST00000475235 DEKP35659 375 aaKnown RBP14.41□□□□□ -0.1
HLA-DOB-208ENST00000475235 MMP14P50281 582 aa14.41□□□□□ -0.1
HLA-DOB-208ENST00000475235 MKRN4PQ13434 485 aaPredicted RBP14.41□□□□□ -0.1
HLA-DOB-208ENST00000475235 TXNRD3Q86VQ6 643 aa14.41□□□□□ -0.1
HLA-DOB-208ENST00000475235 GMLQ99445 158 aa14.41□□□□□ -0.1
HLA-DOB-208ENST00000475235 TRAF5O00463 557 aa14.4□□□□□ -0.1
HLA-DOB-208ENST00000475235 KLRK1P26718 216 aa14.4□□□□□ -0.1
HLA-DOB-208ENST00000475235 DACT2Q5SW24 774 aa14.4□□□□□ -0.1
HLA-DOB-208ENST00000475235 RBM26Q5T8P6 1007 aaKnown RBP14.4□□□□□ -0.1
HLA-DOB-208ENST00000475235 ZNF804AQ7Z570 1209 aa14.4□□□□□ -0.1
HLA-DOB-208ENST00000475235 OGFOD1Q8N543 542 aa14.4□□□□□ -0.1
HLA-DOB-208ENST00000475235 ANKRD44Q8N8A2 993 aa14.4□□□□□ -0.1
HLA-DOB-208ENST00000475235 HELBQ8NG08 1087 aaPredicted RBP14.4□□□□□ -0.1
HLA-DOB-208ENST00000475235 FBXW7Q969H0 707 aa14.4□□□□□ -0.1
HLA-DOB-208ENST00000475235 DCPSQ96C86 337 aaKnown RBP14.4□□□□□ -0.1
HLA-DOB-208ENST00000475235 GLIS2Q9BZE0 524 aaPredicted RBP14.4□□□□□ -0.1
HLA-DOB-208ENST00000475235 ABT1Q9ULW3 272 aaKnown RBP14.4□□□□□ -0.1
HLA-DOB-208ENST00000475235 MROH5Q6ZUA9 1318 aa14.39□□□□□ -0.11
HLA-DOB-208ENST00000475235 RASSF10A6NK89 507 aa14.39□□□□□ -0.11
HLA-DOB-208ENST00000475235 IPO8O15397 1037 aaKnown RBP14.39□□□□□ -0.11
HLA-DOB-208ENST00000475235 EGFRP00533 1210 aa14.39□□□□□ -0.11
HLA-DOB-208ENST00000475235 UBE4AQ14139 1066 aa14.39□□□□□ -0.11
HLA-DOB-208ENST00000475235 DEFB115Q30KQ5 88 aa14.39□□□□□ -0.11
HLA-DOB-208ENST00000475235 TTLL5Q6EMB2 1281 aa14.39□□□□□ -0.11
HLA-DOB-208ENST00000475235 CD209Q9NNX6 404 aa14.39□□□□□ -0.11
HLA-DOB-208ENST00000475235 A0A0U1RQG5 324 aaPredicted RBP14.38□□□□□ -0.11
HLA-DOB-208ENST00000475235 PLIN1O60240 522 aa14.38□□□□□ -0.11
HLA-DOB-208ENST00000475235 UBTFL1P0CB47 393 aaPredicted RBP14.38□□□□□ -0.11
HLA-DOB-208ENST00000475235 MYOZ2Q9NPC6 264 aa14.38□□□□□ -0.11
HLA-DOB-208ENST00000475235 IRS2Q9Y4H2 1338 aa14.38□□□□□ -0.11
HLA-DOB-208ENST00000475235 SNAP23O00161 211 aa14.37□□□□□ -0.11
HLA-DOB-208ENST00000475235 CELF2O95319 508 aaKnown RBP14.37□□□□□ -0.11
HLA-DOB-208ENST00000475235 GTF2IP78347 998 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms