RNA–Protein interactions for RNA: ENST00000475158.1

CDH23-211, Transcript of cadherin related 23, humanhuman

TSL 1 (best)

Gene CDH23, Length 4,114 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-211ENST00000475158 NSFL1CQ9UNZ2 370 aaKnown RBP11.09□□□□□ -0.63
CDH23-211ENST00000475158 GCC2Q8IWJ2 1684 aa11.09□□□□□ -0.63
CDH23-211ENST00000475158 B4E1Z4 1266 aa11.08□□□□□ -0.64
CDH23-211ENST00000475158 SLC27A2O14975 620 aa11.08□□□□□ -0.64
CDH23-211ENST00000475158 PTGS1P23219 599 aa11.08□□□□□ -0.64
CDH23-211ENST00000475158 MRPS27Q92552 414 aaKnown RBP11.08□□□□□ -0.64
CDH23-211ENST00000475158 NUP88Q99567 741 aaPredicted RBP11.08□□□□□ -0.64
CDH23-211ENST00000475158 ABCC4O15439 1325 aa11.08□□□□□ -0.64
CDH23-211ENST00000475158 PLEKHG3A1L390 1219 aa11.08□□□□□ -0.64
CDH23-211ENST00000475158 GCKRQ14397 625 aa11.08□□□□□ -0.64
CDH23-211ENST00000475158 RTN1Q16799 776 aa11.08□□□□□ -0.64
CDH23-211ENST00000475158 METTL22Q9BUU2 404 aaPredicted RBP11.08□□□□□ -0.64
CDH23-211ENST00000475158 ACBD3Q9H3P7 528 aa11.08□□□□□ -0.64
CDH23-211ENST00000475158 SKILP12757 684 aa11.08□□□□□ -0.64
CDH23-211ENST00000475158 PTH1RQ03431 593 aa11.08□□□□□ -0.64
CDH23-211ENST00000475158 DMTNQ08495 405 aa11.08□□□□□ -0.64
CDH23-211ENST00000475158 NAA16Q6N069 864 aaPredicted RBP11.08□□□□□ -0.64
CDH23-211ENST00000475158 CCDC102AQ96A19 550 aa11.08□□□□□ -0.64
CDH23-211ENST00000475158 PLIN2Q99541 437 aa11.08□□□□□ -0.64
CDH23-211ENST00000475158 ZFYP08048 801 aaPredicted RBP11.07□□□□□ -0.64
CDH23-211ENST00000475158 SIRT2Q8IXJ6 389 aa11.07□□□□□ -0.64
CDH23-211ENST00000475158 TMEM63CQ9P1W3 806 aa11.07□□□□□ -0.64
CDH23-211ENST00000475158 EYA2O00167 538 aa11.07□□□□□ -0.64
CDH23-211ENST00000475158 SPTLC2O15270 562 aa11.07□□□□□ -0.64
CDH23-211ENST00000475158 UQCRFS1P1P0C7P4 283 aa11.07□□□□□ -0.64
CDH23-211ENST00000475158 SPTY2D1Q68D10 685 aaPredicted RBP11.07□□□□□ -0.64
CDH23-211ENST00000475158 KAT14Q9H8E8 782 aa11.07□□□□□ -0.64
CDH23-211ENST00000475158 PRR36Q9H6K5 1346 aa11.07□□□□□ -0.64
CDH23-211ENST00000475158 hCG_1642624A0A1W2PR95 340 aa11.07□□□□□ -0.64
CDH23-211ENST00000475158 GIGYF1O75420 1035 aaPredicted RBP11.07□□□□□ -0.64
CDH23-211ENST00000475158 MBD4O95243 580 aa11.07□□□□□ -0.64
CDH23-211ENST00000475158 PICALMQ13492 652 aa11.07□□□□□ -0.64
CDH23-211ENST00000475158 SPECC1Q5M775 1068 aa11.07□□□□□ -0.64
CDH23-211ENST00000475158 IFIT1BQ5T764 474 aaKnown RBP11.07□□□□□ -0.64
CDH23-211ENST00000475158 TTLL7Q6ZT98 887 aa11.07□□□□□ -0.64
CDH23-211ENST00000475158 ZNF622Q969S3 477 aaKnown RBP eCLIP11.07□□□□□ -0.64
CDH23-211ENST00000475158 NLRP3Q96P20 1036 aa11.07□□□□□ -0.64
CDH23-211ENST00000475158 SETD1BQ9UPS6 1966 aaKnown RBP11.07□□□□□ -0.64
CDH23-211ENST00000475158 KDM5CP41229 1560 aa11.07□□□□□ -0.64
CDH23-211ENST00000475158 ITGA6P23229 1130 aa11.07□□□□□ -0.64
CDH23-211ENST00000475158 UBASH3AP57075 661 aa11.07□□□□□ -0.64
CDH23-211ENST00000475158 TMCO3Q6UWJ1 677 aa11.07□□□□□ -0.64
CDH23-211ENST00000475158 DHX58Q96C10 678 aa11.07□□□□□ -0.64
CDH23-211ENST00000475158 INTS4Q96HW7 963 aaKnown RBP11.07□□□□□ -0.64
CDH23-211ENST00000475158 SETDB2Q96T68 719 aa11.07□□□□□ -0.64
CDH23-211ENST00000475158 SYCP1Q15431 976 aa11.06□□□□□ -0.64
CDH23-211ENST00000475158 SLC52A2Q9HAB3 445 aa11.06□□□□□ -0.64
CDH23-211ENST00000475158 SAMD9LQ8IVG5 1584 aa11.06□□□□□ -0.64
CDH23-211ENST00000475158 TMEM2Q9UHN6 1383 aa11.06□□□□□ -0.64
CDH23-211ENST00000475158 A0A0D9SFI3 127 aa11.06□□□□□ -0.64
CDH23-211ENST00000475158 CDC37L1Q7L3B6 337 aa11.06□□□□□ -0.64
CDH23-211ENST00000475158 RAD50Q92878 1312 aa11.06□□□□□ -0.64
CDH23-211ENST00000475158 GNG11P61952 73 aa11.06□□□□□ -0.64
CDH23-211ENST00000475158 PDE4BQ07343 736 aa11.06□□□□□ -0.64
CDH23-211ENST00000475158 TDRD12Q587J7 1177 aaKnown RBP11.06□□□□□ -0.64
CDH23-211ENST00000475158 ESR2Q92731 530 aa11.06□□□□□ -0.64
CDH23-211ENST00000475158 TRPM2O94759 1503 aa11.06□□□□□ -0.64
CDH23-211ENST00000475158 N4BP3O15049 544 aa11.05□□□□□ -0.64
CDH23-211ENST00000475158 GAS2L3Q86XJ1 694 aa11.05□□□□□ -0.64
CDH23-211ENST00000475158 MTIF2P46199 727 aaKnown RBP11.05□□□□□ -0.64
CDH23-211ENST00000475158 CHMP4BP1P59074 171 aa11.05□□□□□ -0.64
CDH23-211ENST00000475158 CACNA2D4Q7Z3S7 1137 aa11.05□□□□□ -0.64
CDH23-211ENST00000475158 RASEFQ8IZ41 740 aa11.05□□□□□ -0.64
CDH23-211ENST00000475158 PHKBQ93100 1093 aa11.05□□□□□ -0.64
CDH23-211ENST00000475158 XAGE2Q96GT9 111 aa11.05□□□□□ -0.64
CDH23-211ENST00000475158 PLCD4Q9BRC7 762 aa11.05□□□□□ -0.64
CDH23-211ENST00000475158 LMBRD1Q9NUN5 540 aa11.05□□□□□ -0.64
CDH23-211ENST00000475158 MCM9Q9NXL9 1143 aa11.05□□□□□ -0.64
CDH23-211ENST00000475158 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.05□□□□□ -0.64
CDH23-211ENST00000475158 UBAP1LF5GYI3 381 aa11.05□□□□□ -0.64
CDH23-211ENST00000475158 SNW1Q13573 536 aaKnown RBP11.05□□□□□ -0.64
CDH23-211ENST00000475158 TCERG1LQ5VWI1 586 aa11.05□□□□□ -0.64
CDH23-211ENST00000475158 HEATR3Q7Z4Q2 680 aa11.05□□□□□ -0.64
CDH23-211ENST00000475158 PLBD2Q8NHP8 589 aa11.05□□□□□ -0.64
CDH23-211ENST00000475158 UTP14AQ9BVJ6 771 aaKnown RBP11.05□□□□□ -0.64
CDH23-211ENST00000475158 ZNF287Q9HBT7 754 aa11.05□□□□□ -0.64
CDH23-211ENST00000475158 RPS6KB1P23443 525 aa11.04□□□□□ -0.64
CDH23-211ENST00000475158 GIMAP7Q8NHV1 300 aa11.04□□□□□ -0.64
CDH23-211ENST00000475158 ARMT1Q9H993 441 aa11.04□□□□□ -0.64
CDH23-211ENST00000475158 TMOD2Q9NZR1 351 aa11.04□□□□□ -0.64
CDH23-211ENST00000475158 GPAA1O43292 621 aa11.04□□□□□ -0.64
CDH23-211ENST00000475158 ZAP70P43403 619 aa11.04□□□□□ -0.64
CDH23-211ENST00000475158 KCNG4Q8TDN1 519 aa11.04□□□□□ -0.64
CDH23-211ENST00000475158 TLR7Q9NYK1 1049 aaKnown RBP11.04□□□□□ -0.64
CDH23-211ENST00000475158 DNAI1Q9UI46 699 aa11.04□□□□□ -0.64
CDH23-211ENST00000475158 INSRP06213 1382 aa11.04□□□□□ -0.64
CDH23-211ENST00000475158 LMAN1P49257 510 aa11.04□□□□□ -0.64
CDH23-211ENST00000475158 SF3B2Q13435 895 aaKnown RBP11.04□□□□□ -0.64
CDH23-211ENST00000475158 ME3Q16798 604 aa11.04□□□□□ -0.64
CDH23-211ENST00000475158 SSH3Q8TE77 659 aa11.04□□□□□ -0.64
CDH23-211ENST00000475158 UIMC1Q96RL1 719 aa11.04□□□□□ -0.64
CDH23-211ENST00000475158 CRNKL1Q9BZJ0 848 aaKnown RBP11.04□□□□□ -0.64
CDH23-211ENST00000475158 TSPY3P0CV98 308 aa11.03□□□□□ -0.64
CDH23-211ENST00000475158 TSPY8P0CW00 308 aa11.03□□□□□ -0.64
CDH23-211ENST00000475158 MATR3P43243 847 aaKnown RBP eCLIP11.03□□□□□ -0.64
CDH23-211ENST00000475158 MNAT1P51948 309 aa11.03□□□□□ -0.64
CDH23-211ENST00000475158 TTC37Q6PGP7 1564 aa11.03□□□□□ -0.64
CDH23-211ENST00000475158 TCP11L1Q9NUJ3 509 aa11.03□□□□□ -0.64
CDH23-211ENST00000475158 IFNKQ9P0W0 207 aa11.03□□□□□ -0.64
CDH23-211ENST00000475158 NEURL1BA8MQ27 555 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms