RNA–Protein interactions for RNA: ENST00000474945.1

SPCS1-204, Transcript of signal peptidase complex subunit 1, humanhuman

TSL 2

Gene SPCS1, Length 981 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1-204ENST00000474945 USP17L4A6NCW7 530 aa17.16■□□□□ 0.34
SPCS1-204ENST00000474945 HNRNPUQ00839 825 aaKnown RBP eCLIP17.16■□□□□ 0.34
SPCS1-204ENST00000474945 FMR1Q06787 632 aaKnown RBP eCLIP17.16■□□□□ 0.34
SPCS1-204ENST00000474945 KIF4BQ2VIQ3 1234 aa17.16■□□□□ 0.34
SPCS1-204ENST00000474945 RBM26Q5T8P6 1007 aaKnown RBP17.16■□□□□ 0.34
SPCS1-204ENST00000474945 USP17L1Q7RTZ2 530 aa17.16■□□□□ 0.34
SPCS1-204ENST00000474945 HELBQ8NG08 1087 aaPredicted RBP17.16■□□□□ 0.34
SPCS1-204ENST00000474945 COA1Q9GZY4 146 aa17.16■□□□□ 0.34
SPCS1-204ENST00000474945 BICC1Q9H694 974 aaKnown RBP17.16■□□□□ 0.34
SPCS1-204ENST00000474945 UTYO14607 1347 aa17.16■□□□□ 0.34
SPCS1-204ENST00000474945 TAF5LO75529 589 aa17.15■□□□□ 0.34
SPCS1-204ENST00000474945 EGFRP00533 1210 aa17.15■□□□□ 0.34
SPCS1-204ENST00000474945 LDHAL6AQ6ZMR3 332 aa17.15■□□□□ 0.34
SPCS1-204ENST00000474945 TXNRD3Q86VQ6 643 aa17.15■□□□□ 0.34
SPCS1-204ENST00000474945 AGBL3Q8NEM8 1001 aa17.15■□□□□ 0.34
SPCS1-204ENST00000474945 ZC3H15Q8WU90 426 aaKnown RBP17.15■□□□□ 0.34
SPCS1-204ENST00000474945 PAXIP1Q6ZW49 1069 aaPredicted RBP17.14■□□□□ 0.33
SPCS1-204ENST00000474945 KAZALD1Q96I82 304 aa17.14■□□□□ 0.33
SPCS1-204ENST00000474945 ZNF408Q9H9D4 720 aa17.14■□□□□ 0.33
SPCS1-204ENST00000474945 NOB1Q9ULX3 412 aaKnown RBP17.14■□□□□ 0.33
SPCS1-204ENST00000474945 KIF16BQ96L93 1317 aa17.14■□□□□ 0.33
SPCS1-204ENST00000474945 SNAP23O00161 211 aa17.13■□□□□ 0.33
SPCS1-204ENST00000474945 PLIN1O60240 522 aa17.13■□□□□ 0.33
SPCS1-204ENST00000474945 CELF2O95319 508 aaKnown RBP17.13■□□□□ 0.33
SPCS1-204ENST00000474945 API5Q9BZZ5 524 aaKnown RBP17.13■□□□□ 0.33
SPCS1-204ENST00000474945 GGA3Q9NZ52 723 aa17.13■□□□□ 0.33
SPCS1-204ENST00000474945 TRPM7Q96QT4 1865 aa17.12■□□□□ 0.33
SPCS1-204ENST00000474945 PCNTO95613 3336 aa17.12■□□□□ 0.33
SPCS1-204ENST00000474945 USP17L8P0C7I0 530 aa17.12■□□□□ 0.33
SPCS1-204ENST00000474945 RARSP54136 660 aaKnown RBP17.12■□□□□ 0.33
SPCS1-204ENST00000474945 RABL6Q3YEC7 729 aaPredicted RBP17.12■□□□□ 0.33
SPCS1-204ENST00000474945 CDC37L1Q7L3B6 337 aa17.12■□□□□ 0.33
SPCS1-204ENST00000474945 ZNF804AQ7Z570 1209 aa17.12■□□□□ 0.33
SPCS1-204ENST00000474945 ANKRD44Q8N8A2 993 aa17.12■□□□□ 0.33
SPCS1-204ENST00000474945 MXD3Q9BW11 206 aa17.12■□□□□ 0.33
SPCS1-204ENST00000474945 PGAP2Q9UHJ9 254 aa17.12■□□□□ 0.33
SPCS1-204ENST00000474945 MYO3BQ8WXR4 1341 aa17.12■□□□□ 0.33
SPCS1-204ENST00000474945 RASSF10A6NK89 507 aa17.11■□□□□ 0.33
SPCS1-204ENST00000474945 HSPA1AP0DMV8 641 aaKnown RBP17.11■□□□□ 0.33
SPCS1-204ENST00000474945 HSPA1BP0DMV9 641 aaKnown RBP17.11■□□□□ 0.33
SPCS1-204ENST00000474945 VEGFBP49765 207 aa17.11■□□□□ 0.33
SPCS1-204ENST00000474945 ZNF280AP59817 542 aaPredicted RBP17.11■□□□□ 0.33
SPCS1-204ENST00000474945 DACT2Q5SW24 774 aa17.11■□□□□ 0.33
SPCS1-204ENST00000474945 STRIP1Q5VSL9 837 aa17.11■□□□□ 0.33
SPCS1-204ENST00000474945 KRT26Q7Z3Y9 468 aa17.11■□□□□ 0.33
SPCS1-204ENST00000474945 DCPSQ96C86 337 aaKnown RBP17.11■□□□□ 0.33
SPCS1-204ENST00000474945 USP44Q9H0E7 712 aa17.11■□□□□ 0.33
SPCS1-204ENST00000474945 ZNF646O15015 1829 aaPredicted RBP17.11■□□□□ 0.33
SPCS1-204ENST00000474945 ADM5C9JUS6 153 aa17.1■□□□□ 0.33
SPCS1-204ENST00000474945 GRM1Q13255 1194 aa17.1■□□□□ 0.33
SPCS1-204ENST00000474945 USP48Q86UV5 1035 aa17.1■□□□□ 0.33
SPCS1-204ENST00000474945 GMLQ99445 158 aa17.1■□□□□ 0.33
SPCS1-204ENST00000474945 MYOZ2Q9NPC6 264 aa17.1■□□□□ 0.33
SPCS1-204ENST00000474945 ASTN2O75129 1339 aaPredicted RBP17.1■□□□□ 0.33
SPCS1-204ENST00000474945 UBTFL1P0CB47 393 aaPredicted RBP17.09■□□□□ 0.33
SPCS1-204ENST00000474945 BRPF1P55201 1214 aaPredicted RBP17.09■□□□□ 0.33
SPCS1-204ENST00000474945 GTF2IP78347 998 aa17.09■□□□□ 0.33
SPCS1-204ENST00000474945 DEFB115Q30KQ5 88 aa17.09■□□□□ 0.33
SPCS1-204ENST00000474945 CST9Q5W186 159 aa17.09■□□□□ 0.33
SPCS1-204ENST00000474945 SULF1Q8IWU6 871 aa17.09■□□□□ 0.33
SPCS1-204ENST00000474945 OGFOD1Q8N543 542 aa17.09■□□□□ 0.33
SPCS1-204ENST00000474945 PUS3Q9BZE2 481 aaKnown RBP17.09■□□□□ 0.33
SPCS1-204ENST00000474945 CD209Q9NNX6 404 aa17.09■□□□□ 0.33
SPCS1-204ENST00000474945 IRS2Q9Y4H2 1338 aa17.09■□□□□ 0.33
SPCS1-204ENST00000474945 MROH5Q6ZUA9 1318 aa17.08■□□□□ 0.32
SPCS1-204ENST00000474945 METTL24Q5JXM2 366 aa17.08■□□□□ 0.32
SPCS1-204ENST00000474945 ANGEL2Q5VTE6 544 aaKnown RBP17.08■□□□□ 0.32
SPCS1-204ENST00000474945 TTLL5Q6EMB2 1281 aa17.08■□□□□ 0.32
SPCS1-204ENST00000474945 C15orf52Q6ZUT6 534 aaKnown RBP17.08■□□□□ 0.32
SPCS1-204ENST00000474945 TLL2Q9Y6L7 1015 aa17.08■□□□□ 0.32
SPCS1-204ENST00000474945 SCARF1Q14162 830 aa17.07■□□□□ 0.32
SPCS1-204ENST00000474945 DLK2Q6UY11 383 aa17.07■□□□□ 0.32
SPCS1-204ENST00000474945 KIAA0825Q8IV33 1275 aa17.07■□□□□ 0.32
SPCS1-204ENST00000474945 KLHDC4Q8TBB5 520 aa17.07■□□□□ 0.32
SPCS1-204ENST00000474945 JAG2Q9Y219 1238 aa17.07■□□□□ 0.32
SPCS1-204ENST00000474945 THSD7BQ9C0I4 1608 aa17.07■□□□□ 0.32
SPCS1-204ENST00000474945 WDR33Q9C0J8 1336 aaKnown RBP17.06■□□□□ 0.32
SPCS1-204ENST00000474945 SASH1O94885 1247 aa17.06■□□□□ 0.32
SPCS1-204ENST00000474945 LRRC24Q50LG9 513 aa17.06■□□□□ 0.32
SPCS1-204ENST00000474945 FRAT1Q92837 279 aaPredicted RBP17.06■□□□□ 0.32
SPCS1-204ENST00000474945 CAPNS2Q96L46 248 aa17.06■□□□□ 0.32
SPCS1-204ENST00000474945 HDAC9Q9UKV0 1011 aa17.06■□□□□ 0.32
SPCS1-204ENST00000474945 ECE1P42892 770 aa17.05■□□□□ 0.32
SPCS1-204ENST00000474945 UBE4AQ14139 1066 aa17.05■□□□□ 0.32
SPCS1-204ENST00000474945 CYP4F22Q6NT55 531 aa17.05■□□□□ 0.32
SPCS1-204ENST00000474945 SAPCD2Q86UD0 394 aa17.05■□□□□ 0.32
SPCS1-204ENST00000474945 AIDAQ96BJ3 306 aa17.05■□□□□ 0.32
SPCS1-204ENST00000474945 RIPOR2Q9Y4F9 1068 aa17.05■□□□□ 0.32
SPCS1-204ENST00000474945 LRRFIP2Q9Y608 721 aaKnown RBP17.05■□□□□ 0.32
SPCS1-204ENST00000474945 ZBED9Q6R2W3 1325 aa17.04■□□□□ 0.32
SPCS1-204ENST00000474945 IPO8O15397 1037 aaKnown RBP17.04■□□□□ 0.32
SPCS1-204ENST00000474945 IL1R1P14778 569 aa17.04■□□□□ 0.32
SPCS1-204ENST00000474945 GYG1P46976 350 aa17.04■□□□□ 0.32
SPCS1-204ENST00000474945 ARHGAP45Q92619 1136 aa17.04■□□□□ 0.32
SPCS1-204ENST00000474945 MEIS3Q99687 375 aa17.04■□□□□ 0.32
SPCS1-204ENST00000474945 PITPNM2Q9BZ72 1349 aa17.03■□□□□ 0.32
SPCS1-204ENST00000474945 F8W031 263 aaPredicted RBP17.03■□□□□ 0.32
SPCS1-204ENST00000474945 BCAR3O75815 825 aa17.03■□□□□ 0.32
SPCS1-204ENST00000474945 TRIM27P14373 513 aa17.03■□□□□ 0.32
SPCS1-204ENST00000474945 NBPF9Q3BBW0 867 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms