RNA–Protein interactions for RNA: ENST00000474742.1

HDAC9-222, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-222ENST00000474742 ANKRD34AQ69YU3 496 aa2.09□□□□□ -2.07
HDAC9-222ENST00000474742 Q6ZS46 218 aa2.09□□□□□ -2.07
HDAC9-222ENST00000474742 CAPN12Q6ZSI9 719 aa2.09□□□□□ -2.07
HDAC9-222ENST00000474742 ILDR2Q71H61 639 aa2.09□□□□□ -2.07
HDAC9-222ENST00000474742 ANKMY2Q8IV38 441 aa2.09□□□□□ -2.07
HDAC9-222ENST00000474742 ARMC10Q8N2F6 343 aa2.09□□□□□ -2.07
HDAC9-222ENST00000474742 FLCNQ8NFG4 579 aa2.09□□□□□ -2.07
HDAC9-222ENST00000474742 FBXL18Q96ME1 805 aa2.09□□□□□ -2.07
HDAC9-222ENST00000474742 SLC38A3Q99624 504 aa2.09□□□□□ -2.07
HDAC9-222ENST00000474742 VRTNQ9H8Y1 702 aa2.09□□□□□ -2.07
HDAC9-222ENST00000474742 C11orf16Q9NQ32 467 aa2.09□□□□□ -2.07
HDAC9-222ENST00000474742 ADGRE2Q9UHX3 823 aa2.09□□□□□ -2.07
HDAC9-222ENST00000474742 FSCN2O14926 492 aa2.08□□□□□ -2.08
HDAC9-222ENST00000474742 DDX3YO15523 660 aaKnown RBP2.08□□□□□ -2.08
HDAC9-222ENST00000474742 MMP20O60882 483 aa2.08□□□□□ -2.08
HDAC9-222ENST00000474742 WISP1O95388 367 aa2.08□□□□□ -2.08
HDAC9-222ENST00000474742 JUNBP17275 347 aaPredicted RBP2.08□□□□□ -2.08
HDAC9-222ENST00000474742 PTPRAP18433 802 aa2.08□□□□□ -2.08
HDAC9-222ENST00000474742 IGFBP4P22692 258 aa2.08□□□□□ -2.08
HDAC9-222ENST00000474742 GRNP28799 593 aaKnown RBP2.08□□□□□ -2.08
HDAC9-222ENST00000474742 WEE1P30291 646 aa2.08□□□□□ -2.08
HDAC9-222ENST00000474742 HOXA10P31260 410 aaPredicted RBP2.08□□□□□ -2.08
HDAC9-222ENST00000474742 ARL4DP49703 201 aa2.08□□□□□ -2.08
HDAC9-222ENST00000474742 USP11P51784 963 aa2.08□□□□□ -2.08
HDAC9-222ENST00000474742 NFKBIBQ15653 356 aa2.08□□□□□ -2.08
HDAC9-222ENST00000474742 OCLNQ16625 522 aa2.08□□□□□ -2.08
HDAC9-222ENST00000474742 TMEM164Q5U3C3 297 aa2.08□□□□□ -2.08
HDAC9-222ENST00000474742 PAOXQ6QHF9 649 aa2.08□□□□□ -2.08
HDAC9-222ENST00000474742 C14orf37Q86TY3 774 aa2.08□□□□□ -2.08
HDAC9-222ENST00000474742 VSIG10LQ86VR7 867 aa2.08□□□□□ -2.08
HDAC9-222ENST00000474742 TREML1Q86YW5 311 aa2.08□□□□□ -2.08
HDAC9-222ENST00000474742 KSR1Q8IVT5 923 aa2.08□□□□□ -2.08
HDAC9-222ENST00000474742 POU5F2Q8N7G0 328 aa2.08□□□□□ -2.08
HDAC9-222ENST00000474742 C12orf50Q8NA57 414 aaPredicted RBP2.08□□□□□ -2.08
HDAC9-222ENST00000474742 KLHL23Q8NBE8 558 aa2.08□□□□□ -2.08
HDAC9-222ENST00000474742 GALNT11Q8NCW6 608 aa2.08□□□□□ -2.08
HDAC9-222ENST00000474742 AGBL5Q8NDL9 886 aa2.08□□□□□ -2.08
HDAC9-222ENST00000474742 UBASH3BQ8TF42 649 aa2.08□□□□□ -2.08
HDAC9-222ENST00000474742 FAM46AQ96IP4 442 aaKnown RBP2.08□□□□□ -2.08
HDAC9-222ENST00000474742 FAM83CQ9BQN1 747 aa2.08□□□□□ -2.08
HDAC9-222ENST00000474742 RUSC1Q9BVN2 902 aa2.08□□□□□ -2.08
HDAC9-222ENST00000474742 SEC31BQ9NQW1 1179 aa2.08□□□□□ -2.08
HDAC9-222ENST00000474742 DMGDHQ9UI17 866 aaKnown RBP2.08□□□□□ -2.08
HDAC9-222ENST00000474742 NOVA2Q9UNW9 492 aaKnown RBP2.08□□□□□ -2.08
HDAC9-222ENST00000474742 BCS1LQ9Y276 419 aa2.08□□□□□ -2.08
HDAC9-222ENST00000474742 HIF3AQ9Y2N7 669 aa2.08□□□□□ -2.08
HDAC9-222ENST00000474742 TMEM88BA6NKF7 163 aa2.07□□□□□ -2.08
HDAC9-222ENST00000474742 UBAP1LF5GYI3 381 aa2.07□□□□□ -2.08
HDAC9-222ENST00000474742 BIN1O00499 593 aa2.07□□□□□ -2.08
HDAC9-222ENST00000474742 CYP26A1O43174 497 aa2.07□□□□□ -2.08
HDAC9-222ENST00000474742 ATG7O95352 703 aa2.07□□□□□ -2.08
HDAC9-222ENST00000474742 MAP4P27816 1152 aaKnown RBP2.07□□□□□ -2.08
HDAC9-222ENST00000474742 SOX18P35713 384 aa2.07□□□□□ -2.08
HDAC9-222ENST00000474742 PREPP48147 710 aa2.07□□□□□ -2.08
HDAC9-222ENST00000474742 NLRP12P59046 1061 aa2.07□□□□□ -2.08
HDAC9-222ENST00000474742 FKBP5Q13451 457 aaPredicted RBP2.07□□□□□ -2.08
HDAC9-222ENST00000474742 ELOAQ14241 798 aaKnown RBP2.07□□□□□ -2.08
HDAC9-222ENST00000474742 ZNF124Q15973 351 aa2.07□□□□□ -2.08
HDAC9-222ENST00000474742 ZNF648Q5T619 568 aaPredicted RBP2.07□□□□□ -2.08
HDAC9-222ENST00000474742 NUTM2GQ5VZR2 741 aa2.07□□□□□ -2.08
HDAC9-222ENST00000474742 PHLDB3Q6NSJ2 640 aa2.07□□□□□ -2.08
HDAC9-222ENST00000474742 KIAA1211Q6ZU35 1233 aa2.07□□□□□ -2.08
HDAC9-222ENST00000474742 NLRP13Q86W25 1043 aa2.07□□□□□ -2.08
HDAC9-222ENST00000474742 NCAPG2Q86XI2 1143 aa2.07□□□□□ -2.08
HDAC9-222ENST00000474742 SLC7A3Q8WY07 619 aa2.07□□□□□ -2.08
HDAC9-222ENST00000474742 PBXIP1Q96AQ6 731 aa2.07□□□□□ -2.08
HDAC9-222ENST00000474742 PRIMPOLQ96LW4 560 aa2.07□□□□□ -2.08
HDAC9-222ENST00000474742 METTL22Q9BUU2 404 aaPredicted RBP2.07□□□□□ -2.08
HDAC9-222ENST00000474742 YIPF2Q9BWQ6 316 aa2.07□□□□□ -2.08
HDAC9-222ENST00000474742 KRTAP4-9Q9BYQ8 210 aa2.07□□□□□ -2.08
HDAC9-222ENST00000474742 RNF208Q9H0X6 261 aa2.07□□□□□ -2.08
HDAC9-222ENST00000474742 QTRT2Q9H974 415 aaKnown RBP2.07□□□□□ -2.08
HDAC9-222ENST00000474742 LRRC4CQ9HCJ2 640 aa2.07□□□□□ -2.08
HDAC9-222ENST00000474742 SH2B1Q9NRF2 756 aaPredicted RBP2.07□□□□□ -2.08
HDAC9-222ENST00000474742 BSDC1Q9NW68 430 aaPredicted RBP2.07□□□□□ -2.08
HDAC9-222ENST00000474742 FAM13BQ9NYF5 915 aa2.07□□□□□ -2.08
HDAC9-222ENST00000474742 KCNK4Q9NYG8 393 aa2.07□□□□□ -2.08
HDAC9-222ENST00000474742 CCDC39Q9UFE4 941 aa2.07□□□□□ -2.08
HDAC9-222ENST00000474742 LRFN2Q9ULH4 789 aa2.07□□□□□ -2.08
HDAC9-222ENST00000474742 FAM95CA0A1B0GW59 222 aa2.06□□□□□ -2.08
HDAC9-222ENST00000474742 DBX1A6NMT0 343 aa2.06□□□□□ -2.08
HDAC9-222ENST00000474742 PRMT3O60678 531 aa2.06□□□□□ -2.08
HDAC9-222ENST00000474742 FARP2O94887 1054 aaPredicted RBP2.06□□□□□ -2.08
HDAC9-222ENST00000474742 EGFRP00533 1210 aa2.06□□□□□ -2.08
HDAC9-222ENST00000474742 FOSL1P15407 271 aa2.06□□□□□ -2.08
HDAC9-222ENST00000474742 PIP4K2BP78356 416 aa2.06□□□□□ -2.08
HDAC9-222ENST00000474742 ATP11AP98196 1134 aa2.06□□□□□ -2.08
HDAC9-222ENST00000474742 PLCL1Q15111 1095 aa2.06□□□□□ -2.08
HDAC9-222ENST00000474742 DUSP27Q5VZP5 1158 aa2.06□□□□□ -2.08
HDAC9-222ENST00000474742 PPP1R3FQ6ZSY5 799 aaPredicted RBP2.06□□□□□ -2.08
HDAC9-222ENST00000474742 TTC16Q8NEE8 873 aa2.06□□□□□ -2.08
HDAC9-222ENST00000474742 FAM200AQ8TCP9 573 aa2.06□□□□□ -2.08
HDAC9-222ENST00000474742 PIK3R5Q8WYR1 880 aa2.06□□□□□ -2.08
HDAC9-222ENST00000474742 KLHDC7BQ96G42 594 aa2.06□□□□□ -2.08
HDAC9-222ENST00000474742 TBC1D32Q96NH3 1257 aa2.06□□□□□ -2.08
HDAC9-222ENST00000474742 USP26Q9BXU7 913 aa2.06□□□□□ -2.08
HDAC9-222ENST00000474742 SAP130Q9H0E3 1048 aa2.06□□□□□ -2.08
HDAC9-222ENST00000474742 CYP4F12Q9HCS2 524 aa2.06□□□□□ -2.08
HDAC9-222ENST00000474742 SERPINA10Q9UK55 444 aa2.06□□□□□ -2.08
HDAC9-222ENST00000474742 FNDC3AQ9Y2H6 1198 aaKnown RBP2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms