RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 NOL8Q76FK4 1167 aaKnown RBP25.9■■□□□ 1.74
CCM2-206ENST00000474617 NDUFB9Q9Y6M9 179 aa25.9■■□□□ 1.74
CCM2-206ENST00000474617 MYH7P12883 1935 aa25.9■■□□□ 1.74
CCM2-206ENST00000474617 HSPD1P10809 573 aaKnown RBP25.89■■□□□ 1.74
CCM2-206ENST00000474617 UBE3CQ15386 1083 aa25.89■■□□□ 1.74
CCM2-206ENST00000474617 LY75O60449 1722 aa25.89■■□□□ 1.74
CCM2-206ENST00000474617 CYP21A2P08686 494 aa25.88■■□□□ 1.73
CCM2-206ENST00000474617 ZAP70P43403 619 aa25.88■■□□□ 1.73
CCM2-206ENST00000474617 PKP1Q13835 747 aa25.88■■□□□ 1.73
CCM2-206ENST00000474617 CCDC102BQ68D86 513 aa25.88■■□□□ 1.73
CCM2-206ENST00000474617 SEC62Q99442 399 aaKnown RBP25.88■■□□□ 1.73
CCM2-206ENST00000474617 AKAP11Q9UKA4 1901 aa25.87■■□□□ 1.73
CCM2-206ENST00000474617 MCTP1Q6DN14 999 aa25.87■■□□□ 1.73
CCM2-206ENST00000474617 FBXL16Q8N461 479 aa25.87■■□□□ 1.73
CCM2-206ENST00000474617 CCNL1Q9UK58 526 aaPredicted RBP25.87■■□□□ 1.73
CCM2-206ENST00000474617 RTCBQ9Y3I0 505 aaKnown RBP25.87■■□□□ 1.73
CCM2-206ENST00000474617 COL24A1Q17RW2 1714 aa25.86■■□□□ 1.73
CCM2-206ENST00000474617 ZPR1O75312 459 aa25.86■■□□□ 1.73
CCM2-206ENST00000474617 MBD3O95983 291 aa25.86■■□□□ 1.73
CCM2-206ENST00000474617 MCAMP43121 646 aa25.86■■□□□ 1.73
CCM2-206ENST00000474617 CCDC129Q6ZRS4 1044 aa25.86■■□□□ 1.73
CCM2-206ENST00000474617 AFF2P51816 1311 aa25.86■■□□□ 1.73
CCM2-206ENST00000474617 WASHC4Q2M389 1173 aa25.85■■□□□ 1.73
CCM2-206ENST00000474617 DHX32Q7L7V1 743 aaKnown RBP25.85■■□□□ 1.73
CCM2-206ENST00000474617 GOLGA6L3A6NEY3 463 aa25.84■■□□□ 1.73
CCM2-206ENST00000474617 STX6O43752 255 aa25.84■■□□□ 1.73
CCM2-206ENST00000474617 ADRA2BP18089 450 aa25.84■■□□□ 1.73
CCM2-206ENST00000474617 ADD2P35612 726 aa25.84■■□□□ 1.73
CCM2-206ENST00000474617 OSBP2Q969R2 916 aa25.84■■□□□ 1.73
CCM2-206ENST00000474617 LMBRD1Q9NUN5 540 aa25.84■■□□□ 1.73
CCM2-206ENST00000474617 DDX49Q9Y6V7 483 aaKnown RBP25.84■■□□□ 1.73
CCM2-206ENST00000474617 ZSCAN22P10073 491 aaPredicted RBP25.83■■□□□ 1.73
CCM2-206ENST00000474617 CPA1P15085 419 aa25.83■■□□□ 1.73
CCM2-206ENST00000474617 ME3Q16798 604 aa25.83■■□□□ 1.73
CCM2-206ENST00000474617 IMMTQ16891 758 aaKnown RBP25.83■■□□□ 1.73
CCM2-206ENST00000474617 ANKRD18AQ8IVF6 992 aa25.83■■□□□ 1.73
CCM2-206ENST00000474617 SETDB2Q96T68 719 aa25.83■■□□□ 1.73
CCM2-206ENST00000474617 TPCN1Q9ULQ1 816 aa25.83■■□□□ 1.73
CCM2-206ENST00000474617 SBF2Q86WG5 1849 aa25.83■■□□□ 1.73
CCM2-206ENST00000474617 FSD2A1L4K1 749 aa25.83■■□□□ 1.72
CCM2-206ENST00000474617 ZBTB22O15209 634 aa25.83■■□□□ 1.72
CCM2-206ENST00000474617 SCARF1Q14162 830 aa25.83■■□□□ 1.72
CCM2-206ENST00000474617 CSPP1Q1MSJ5 1256 aa25.83■■□□□ 1.72
CCM2-206ENST00000474617 BCL11BQ9C0K0 894 aaPredicted RBP25.83■■□□□ 1.72
CCM2-206ENST00000474617 BSDC1Q9NW68 430 aaPredicted RBP25.83■■□□□ 1.72
CCM2-206ENST00000474617 ZMYM6O95789 1325 aa25.83■■□□□ 1.72
CCM2-206ENST00000474617 M0R2C6 588 aa25.82■■□□□ 1.72
CCM2-206ENST00000474617 TOB2Q14106 344 aaPredicted RBP25.82■■□□□ 1.72
CCM2-206ENST00000474617 CCDC83Q8IWF9 413 aa25.82■■□□□ 1.72
CCM2-206ENST00000474617 LLPHQ9BRT6 129 aaKnown RBP25.82■■□□□ 1.72
CCM2-206ENST00000474617 AGXT2Q9BYV1 514 aa25.82■■□□□ 1.72
CCM2-206ENST00000474617 WDR19Q8NEZ3 1342 aa25.82■■□□□ 1.72
CCM2-206ENST00000474617 TAF1LQ8IZX4 1826 aa25.81■■□□□ 1.72
CCM2-206ENST00000474617 GTF2E1P29083 439 aaPredicted RBP25.81■■□□□ 1.72
CCM2-206ENST00000474617 MAP3K12Q12852 859 aa25.81■■□□□ 1.72
CCM2-206ENST00000474617 UBE4AQ14139 1066 aa25.81■■□□□ 1.72
CCM2-206ENST00000474617 TMED8Q6PL24 325 aaPredicted RBP25.81■■□□□ 1.72
CCM2-206ENST00000474617 KLHL34Q8N239 644 aa25.81■■□□□ 1.72
CCM2-206ENST00000474617 SPATA5Q8NB90 893 aa25.81■■□□□ 1.72
CCM2-206ENST00000474617 GNL3LQ9NVN8 582 aaKnown RBP25.81■■□□□ 1.72
CCM2-206ENST00000474617 GNPATO15228 680 aa25.8■■□□□ 1.72
CCM2-206ENST00000474617 SYT1P21579 422 aa25.8■■□□□ 1.72
CCM2-206ENST00000474617 GJB2P29033 226 aa25.8■■□□□ 1.72
CCM2-206ENST00000474617 TPTE2Q6XPS3 522 aa25.8■■□□□ 1.72
CCM2-206ENST00000474617 TMEM87AQ8NBN3 555 aa25.8■■□□□ 1.72
CCM2-206ENST00000474617 SEC31BQ9NQW1 1179 aa25.8■■□□□ 1.72
CCM2-206ENST00000474617 FAM177BA6PVY3 158 aa25.79■■□□□ 1.72
CCM2-206ENST00000474617 IGSF3O75054 1194 aa25.79■■□□□ 1.72
CCM2-206ENST00000474617 HSPA1LP34931 641 aa25.79■■□□□ 1.72
CCM2-206ENST00000474617 PHKA1P46020 1223 aa25.79■■□□□ 1.72
CCM2-206ENST00000474617 ERFEQ4G0M1 354 aa25.79■■□□□ 1.72
CCM2-206ENST00000474617 KIF3AQ9Y496 699 aa25.79■■□□□ 1.72
CCM2-206ENST00000474617 SLC9C2Q5TAH2 1124 aa25.78■■□□□ 1.72
CCM2-206ENST00000474617 NLRP3Q96P20 1036 aa25.78■■□□□ 1.72
CCM2-206ENST00000474617 DOCK2Q92608 1830 aa25.78■■□□□ 1.72
CCM2-206ENST00000474617 E7EWF7 191 aa25.78■■□□□ 1.72
CCM2-206ENST00000474617 GPAA1O43292 621 aa25.78■■□□□ 1.72
CCM2-206ENST00000474617 LARGE1O95461 756 aa25.78■■□□□ 1.72
CCM2-206ENST00000474617 NCLP19338 710 aaKnown RBP25.78■■□□□ 1.72
CCM2-206ENST00000474617 FGD1P98174 961 aa25.78■■□□□ 1.72
CCM2-206ENST00000474617 EXOSC10Q01780 885 aaKnown RBP25.78■■□□□ 1.72
CCM2-206ENST00000474617 CHRNDQ07001 517 aa25.78■■□□□ 1.72
CCM2-206ENST00000474617 SEPT12Q8IYM1 358 aa25.78■■□□□ 1.72
CCM2-206ENST00000474617 GTF3C6Q969F1 213 aa25.78■■□□□ 1.72
CCM2-206ENST00000474617 BCL2L12Q9HB09 334 aa25.78■■□□□ 1.72
CCM2-206ENST00000474617 C4BP0C0L5 1744 aa25.78■■□□□ 1.72
CCM2-206ENST00000474617 MRE11P49959 708 aa25.77■■□□□ 1.72
CCM2-206ENST00000474617 ALX1Q15699 326 aa25.77■■□□□ 1.72
CCM2-206ENST00000474617 SLC27A3Q5K4L6 730 aa25.77■■□□□ 1.72
CCM2-206ENST00000474617 TBC1D9BQ66K14 1250 aa25.77■■□□□ 1.72
CCM2-206ENST00000474617 ZNF804BA4D1E1 1349 aa25.76■■□□□ 1.71
CCM2-206ENST00000474617 SEMA3EO15041 775 aa25.76■■□□□ 1.71
CCM2-206ENST00000474617 F13A1P00488 732 aa25.76■■□□□ 1.71
CCM2-206ENST00000474617 PDE6AP16499 860 aa25.76■■□□□ 1.71
CCM2-206ENST00000474617 GNAT2P19087 354 aa25.76■■□□□ 1.71
CCM2-206ENST00000474617 Q6ZUG5 572 aa25.76■■□□□ 1.71
CCM2-206ENST00000474617 NBPF5PQ86XG9 351 aaPredicted RBP25.76■■□□□ 1.71
CCM2-206ENST00000474617 PRPF40AO75400 957 aaKnown RBP25.75■■□□□ 1.71
CCM2-206ENST00000474617 CHGBP05060 677 aa25.75■■□□□ 1.71
CCM2-206ENST00000474617 TRAPPC3LQ5T215 181 aa25.75■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms