RNA–Protein interactions for RNA: ENST00000474612.1

NOTCH4-204, Transcript of notch 4, humanhuman

TSL 5

Gene NOTCH4, Length 5,267 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4-204ENST00000474612 HOOK2Q96ED9 719 aa20.55■□□□□ 0.88
NOTCH4-204ENST00000474612 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.55■□□□□ 0.88
NOTCH4-204ENST00000474612 TAX1BP1Q86VP1 789 aa20.55■□□□□ 0.88
NOTCH4-204ENST00000474612 CCDC172P0C7W6 258 aa20.54■□□□□ 0.88
NOTCH4-204ENST00000474612 GNA11P29992 359 aa20.54■□□□□ 0.88
NOTCH4-204ENST00000474612 NCBP1Q09161 790 aaKnown RBP20.54■□□□□ 0.88
NOTCH4-204ENST00000474612 SKAP1Q86WV1 359 aa20.54■□□□□ 0.88
NOTCH4-204ENST00000474612 PPFIA3O75145 1194 aa20.54■□□□□ 0.88
NOTCH4-204ENST00000474612 HCLS1P14317 486 aaPredicted RBP20.53■□□□□ 0.88
NOTCH4-204ENST00000474612 STAT6P42226 847 aa20.53■□□□□ 0.88
NOTCH4-204ENST00000474612 SYKP43405 635 aa20.53■□□□□ 0.88
NOTCH4-204ENST00000474612 TMX3Q96JJ7 454 aa20.53■□□□□ 0.88
NOTCH4-204ENST00000474612 BIN1O00499 593 aa20.53■□□□□ 0.88
NOTCH4-204ENST00000474612 NECAB1Q8N987 351 aa20.53■□□□□ 0.88
NOTCH4-204ENST00000474612 DPP8Q6V1X1 898 aaPredicted RBP20.53■□□□□ 0.88
NOTCH4-204ENST00000474612 UBE2HP62256 183 aa20.53■□□□□ 0.88
NOTCH4-204ENST00000474612 TNPO1Q92973 898 aaKnown RBP20.53■□□□□ 0.88
NOTCH4-204ENST00000474612 FLAD1Q8NFF5 587 aa20.52■□□□□ 0.88
NOTCH4-204ENST00000474612 TSPYL1Q9H0U9 437 aa20.52■□□□□ 0.88
NOTCH4-204ENST00000474612 LEKR1Q6ZMV7 388 aa20.52■□□□□ 0.88
NOTCH4-204ENST00000474612 TRIM47Q96LD4 638 aa20.52■□□□□ 0.88
NOTCH4-204ENST00000474612 GBP3Q9H0R5 595 aa20.52■□□□□ 0.88
NOTCH4-204ENST00000474612 ERVV-2B6SEH9 535 aa20.52■□□□□ 0.88
NOTCH4-204ENST00000474612 LARGE2Q8N3Y3 721 aa20.52■□□□□ 0.88
NOTCH4-204ENST00000474612 WDR66Q8TBY9 1149 aa20.52■□□□□ 0.88
NOTCH4-204ENST00000474612 TBC1D32Q96NH3 1257 aa20.52■□□□□ 0.88
NOTCH4-204ENST00000474612 DNMT1P26358 1616 aaKnown RBP20.52■□□□□ 0.88
NOTCH4-204ENST00000474612 ZSCAN22P10073 491 aaPredicted RBP20.52■□□□□ 0.87
NOTCH4-204ENST00000474612 PAFAH1B1P43034 410 aa20.52■□□□□ 0.87
NOTCH4-204ENST00000474612 PICK1Q9NRD5 415 aa20.52■□□□□ 0.87
NOTCH4-204ENST00000474612 CLIP2Q9UDT6 1046 aa20.52■□□□□ 0.87
NOTCH4-204ENST00000474612 CTNNA2P26232 953 aa20.51■□□□□ 0.87
NOTCH4-204ENST00000474612 TRIM75PA6NK02 468 aa20.51■□□□□ 0.87
NOTCH4-204ENST00000474612 KRT13P13646 458 aa20.51■□□□□ 0.87
NOTCH4-204ENST00000474612 CPLX3Q8WVH0 158 aa20.51■□□□□ 0.87
NOTCH4-204ENST00000474612 UBXN4Q92575 508 aa20.51■□□□□ 0.87
NOTCH4-204ENST00000474612 HELLSQ9NRZ9 838 aa20.51■□□□□ 0.87
NOTCH4-204ENST00000474612 MAPKBP1O60336 1514 aa20.51■□□□□ 0.87
NOTCH4-204ENST00000474612 CCDC171Q6TFL3 1326 aa20.51■□□□□ 0.87
NOTCH4-204ENST00000474612 TCEANC2Q96MN5 208 aa20.51■□□□□ 0.87
NOTCH4-204ENST00000474612 PUF60Q9UHX1 559 aaKnown RBP20.51■□□□□ 0.87
NOTCH4-204ENST00000474612 CFAP43Q8NDM7 1665 aa20.51■□□□□ 0.87
NOTCH4-204ENST00000474612 ADGRL2O95490 1459 aa20.5■□□□□ 0.87
NOTCH4-204ENST00000474612 NEMFO60524 1076 aa20.5■□□□□ 0.87
NOTCH4-204ENST00000474612 KRT79Q5XKE5 535 aa20.5■□□□□ 0.87
NOTCH4-204ENST00000474612 DNAJC10Q8IXB1 793 aa20.5■□□□□ 0.87
NOTCH4-204ENST00000474612 NAP1L4Q99733 375 aaKnown RBP20.5■□□□□ 0.87
NOTCH4-204ENST00000474612 NPC1L1Q9UHC9 1359 aa20.5■□□□□ 0.87
NOTCH4-204ENST00000474612 GSDMDP57764 484 aa20.5■□□□□ 0.87
NOTCH4-204ENST00000474612 PTPN14Q15678 1187 aa20.5■□□□□ 0.87
NOTCH4-204ENST00000474612 KIF4BQ2VIQ3 1234 aa20.5■□□□□ 0.87
NOTCH4-204ENST00000474612 JAG2Q9Y219 1238 aa20.5■□□□□ 0.87
NOTCH4-204ENST00000474612 MBD4O95243 580 aa20.49■□□□□ 0.87
NOTCH4-204ENST00000474612 A1BGP04217 495 aa20.49■□□□□ 0.87
NOTCH4-204ENST00000474612 ALDH1B1P30837 517 aa20.49■□□□□ 0.87
NOTCH4-204ENST00000474612 LUZP1Q86V48 1076 aa20.49■□□□□ 0.87
NOTCH4-204ENST00000474612 RBM28Q9NW13 759 aaKnown RBP20.49■□□□□ 0.87
NOTCH4-204ENST00000474612 A0A1B0GUL7 405 aa20.49■□□□□ 0.87
NOTCH4-204ENST00000474612 FERMT1Q9BQL6 677 aa20.49■□□□□ 0.87
NOTCH4-204ENST00000474612 CTNNBL1Q8WYA6 563 aaPredicted RBP20.49■□□□□ 0.87
NOTCH4-204ENST00000474612 GDPD2Q9HCC8 539 aa20.49■□□□□ 0.87
NOTCH4-204ENST00000474612 MACROD2A1Z1Q3 448 aa20.49■□□□□ 0.87
NOTCH4-204ENST00000474612 HOOK3Q86VS8 718 aa20.49■□□□□ 0.87
NOTCH4-204ENST00000474612 ALS2CR12Q96Q35 445 aa20.49■□□□□ 0.87
NOTCH4-204ENST00000474612 TMOD4Q9NZQ9 345 aa20.49■□□□□ 0.87
NOTCH4-204ENST00000474612 SBNO2Q9Y2G9 1366 aa20.49■□□□□ 0.87
NOTCH4-204ENST00000474612 PHACTR2O75167 634 aa20.48■□□□□ 0.87
NOTCH4-204ENST00000474612 DHX32Q7L7V1 743 aaKnown RBP20.48■□□□□ 0.87
NOTCH4-204ENST00000474612 TCHPQ9BT92 498 aa20.48■□□□□ 0.87
NOTCH4-204ENST00000474612 LGR6Q9HBX8 967 aa20.48■□□□□ 0.87
NOTCH4-204ENST00000474612 PARP1P09874 1014 aaKnown RBP20.48■□□□□ 0.87
NOTCH4-204ENST00000474612 RRAGBQ5VZM2 374 aa20.48■□□□□ 0.87
NOTCH4-204ENST00000474612 GTPBP4Q9BZE4 634 aaKnown RBP20.48■□□□□ 0.87
NOTCH4-204ENST00000474612 ARHGEF10LQ9HCE6 1279 aa20.48■□□□□ 0.87
NOTCH4-204ENST00000474612 PBRM1Q86U86 1689 aa20.48■□□□□ 0.87
NOTCH4-204ENST00000474612 DDX17Q92841 729 aaKnown RBP20.47■□□□□ 0.87
NOTCH4-204ENST00000474612 CCDC97Q96F63 343 aaPredicted RBP20.47■□□□□ 0.87
NOTCH4-204ENST00000474612 GSTTP1A0A1W2PQM5 241 aa20.47■□□□□ 0.87
NOTCH4-204ENST00000474612 CHL1O00533 1208 aa20.47■□□□□ 0.87
NOTCH4-204ENST00000474612 KRT2P35908 639 aa20.47■□□□□ 0.87
NOTCH4-204ENST00000474612 ZNF165P49910 485 aa20.47■□□□□ 0.87
NOTCH4-204ENST00000474612 SPAG1Q07617 926 aa20.47■□□□□ 0.87
NOTCH4-204ENST00000474612 TBC1D5Q92609 795 aa20.47■□□□□ 0.87
NOTCH4-204ENST00000474612 PZPP20742 1482 aa20.47■□□□□ 0.87
NOTCH4-204ENST00000474612 LTKP29376 864 aa20.47■□□□□ 0.87
NOTCH4-204ENST00000474612 ZBTB40Q9NUA8 1239 aa20.47■□□□□ 0.87
NOTCH4-204ENST00000474612 N4BP3O15049 544 aa20.46■□□□□ 0.87
NOTCH4-204ENST00000474612 IMPG2Q9BZV3 1241 aa20.46■□□□□ 0.87
NOTCH4-204ENST00000474612 ABCA5Q8WWZ7 1642 aa20.46■□□□□ 0.87
NOTCH4-204ENST00000474612 CREB3L3Q68CJ9 461 aa20.46■□□□□ 0.87
NOTCH4-204ENST00000474612 GOLGA6L7A0A1B0GV03 622 aa20.46■□□□□ 0.87
NOTCH4-204ENST00000474612 CASQ1P31415 396 aa20.46■□□□□ 0.87
NOTCH4-204ENST00000474612 MRPS27Q92552 414 aaKnown RBP20.46■□□□□ 0.87
NOTCH4-204ENST00000474612 PSMA7O14818 248 aa20.46■□□□□ 0.87
NOTCH4-204ENST00000474612 MCM3P25205 808 aa20.46■□□□□ 0.87
NOTCH4-204ENST00000474612 FAM193AP78312 1265 aa20.46■□□□□ 0.87
NOTCH4-204ENST00000474612 RAB3GAP1Q15042 981 aa20.46■□□□□ 0.87
NOTCH4-204ENST00000474612 ASIC1P78348 528 aa20.45■□□□□ 0.86
NOTCH4-204ENST00000474612 LPIN2Q92539 896 aa20.45■□□□□ 0.86
NOTCH4-204ENST00000474612 KIF18AQ8NI77 898 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms