RNA–Protein interactions for RNA: ENST00000474157.1

GPNMB-209, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 513 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-209ENST00000474157 RHPN1Q8TCX5 695 aa8.99□□□□□ -0.97
GPNMB-209ENST00000474157 ZDHHC3Q9NYG2 299 aa8.99□□□□□ -0.97
GPNMB-209ENST00000474157 SPATA31A6Q5VVP1 1343 aa8.99□□□□□ -0.97
GPNMB-209ENST00000474157 KIF14Q15058 1648 aa8.98□□□□□ -0.97
GPNMB-209ENST00000474157 CLTCQ00610 1675 aaKnown RBP8.98□□□□□ -0.97
GPNMB-209ENST00000474157 NLRP1Q9C000 1473 aa8.98□□□□□ -0.97
GPNMB-209ENST00000474157 TATP17735 454 aaPredicted RBP8.98□□□□□ -0.97
GPNMB-209ENST00000474157 LAPTM4AQ15012 233 aa8.98□□□□□ -0.97
GPNMB-209ENST00000474157 NBPF9Q3BBW0 867 aa8.98□□□□□ -0.97
GPNMB-209ENST00000474157 C11orf91Q3C1V1 193 aa8.98□□□□□ -0.97
GPNMB-209ENST00000474157 WDR44Q5JSH3 913 aa8.98□□□□□ -0.97
GPNMB-209ENST00000474157 FAM26DQ5JW98 314 aa8.98□□□□□ -0.97
GPNMB-209ENST00000474157 ABTB2Q8N961 1025 aa8.98□□□□□ -0.97
GPNMB-209ENST00000474157 KIDINS220Q9ULH0 1771 aa8.98□□□□□ -0.97
GPNMB-209ENST00000474157 RNF123Q5XPI4 1314 aa8.98□□□□□ -0.97
GPNMB-209ENST00000474157 CDK12Q9NYV4 1490 aaPredicted RBP8.97□□□□□ -0.97
GPNMB-209ENST00000474157 MAPK1P28482 360 aa8.97□□□□□ -0.97
GPNMB-209ENST00000474157 EIF1AXP47813 144 aaKnown RBP8.97□□□□□ -0.97
GPNMB-209ENST00000474157 RIPK4P57078 832 aa8.97□□□□□ -0.97
GPNMB-209ENST00000474157 SATB1Q01826 763 aa8.97□□□□□ -0.97
GPNMB-209ENST00000474157 NOM1Q5C9Z4 860 aaKnown RBP8.97□□□□□ -0.97
GPNMB-209ENST00000474157 DNAJC14Q6Y2X3 702 aaPredicted RBP8.97□□□□□ -0.97
GPNMB-209ENST00000474157 FAM43BQ6ZT52 329 aaPredicted RBP8.97□□□□□ -0.97
GPNMB-209ENST00000474157 TIMMDC1Q9NPL8 285 aa8.97□□□□□ -0.97
GPNMB-209ENST00000474157 ATP13A2Q9NQ11 1180 aa8.97□□□□□ -0.97
GPNMB-209ENST00000474157 AAASQ9NRG9 546 aa8.97□□□□□ -0.97
GPNMB-209ENST00000474157 DCTN4Q9UJW0 460 aa8.97□□□□□ -0.97
GPNMB-209ENST00000474157 DNMT3LQ9UJW3 386 aa8.97□□□□□ -0.97
GPNMB-209ENST00000474157 KIF3AQ9Y496 699 aa8.97□□□□□ -0.97
GPNMB-209ENST00000474157 SYNMO15061 1565 aa8.97□□□□□ -0.97
GPNMB-209ENST00000474157 UGGT1Q9NYU2 1555 aa8.97□□□□□ -0.97
GPNMB-209ENST00000474157 KDM5DQ9BY66 1539 aa8.96□□□□□ -0.97
GPNMB-209ENST00000474157 DEPDC5O75140 1603 aa8.96□□□□□ -0.98
GPNMB-209ENST00000474157 VGLL3A8MV65 326 aa8.96□□□□□ -0.98
GPNMB-209ENST00000474157 ZBTB39O15060 712 aa8.96□□□□□ -0.98
GPNMB-209ENST00000474157 XRCC6P12956 609 aaKnown RBP eCLIP8.96□□□□□ -0.98
GPNMB-209ENST00000474157 ATP4AP20648 1035 aa8.96□□□□□ -0.98
GPNMB-209ENST00000474157 MCM5P33992 734 aa8.96□□□□□ -0.98
GPNMB-209ENST00000474157 LMOD3Q0VAK6 560 aa8.96□□□□□ -0.98
GPNMB-209ENST00000474157 ETFBKMTQ8IXQ9 262 aa8.96□□□□□ -0.98
GPNMB-209ENST00000474157 SLC52A1Q9NWF4 448 aa8.96□□□□□ -0.98
GPNMB-209ENST00000474157 POLR1AO95602 1720 aaPredicted RBP8.96□□□□□ -0.98
GPNMB-209ENST00000474157 TMEM94Q12767 1356 aa8.96□□□□□ -0.98
GPNMB-209ENST00000474157 SAMD9LQ8IVG5 1584 aa8.95□□□□□ -0.98
GPNMB-209ENST00000474157 A0A1B0GTH6 734 aa8.95□□□□□ -0.98
GPNMB-209ENST00000474157 KIF3BO15066 747 aa8.95□□□□□ -0.98
GPNMB-209ENST00000474157 ALKBH2Q6NS38 261 aa8.95□□□□□ -0.98
GPNMB-209ENST00000474157 BICDL1Q6ZP65 573 aa8.95□□□□□ -0.98
GPNMB-209ENST00000474157 C7orf43Q8WVR3 580 aa8.95□□□□□ -0.98
GPNMB-209ENST00000474157 KLRG1Q96E93 195 aa8.95□□□□□ -0.98
GPNMB-209ENST00000474157 IFT43Q96FT9 208 aa8.95□□□□□ -0.98
GPNMB-209ENST00000474157 DACH1Q9UI36 760 aa8.95□□□□□ -0.98
GPNMB-209ENST00000474157 FMN1Q68DA7 1419 aa8.95□□□□□ -0.98
GPNMB-209ENST00000474157 PZPP20742 1482 aa8.95□□□□□ -0.98
GPNMB-209ENST00000474157 MSX1P28360 303 aa8.94□□□□□ -0.98
GPNMB-209ENST00000474157 GABPB1Q06547 395 aaPredicted RBP8.94□□□□□ -0.98
GPNMB-209ENST00000474157 ATCAYQ86WG3 371 aa8.94□□□□□ -0.98
GPNMB-209ENST00000474157 MNS1Q8NEH6 495 aa8.94□□□□□ -0.98
GPNMB-209ENST00000474157 HSH2DQ96JZ2 352 aa8.94□□□□□ -0.98
GPNMB-209ENST00000474157 TIGD1Q96MW7 591 aa8.94□□□□□ -0.98
GPNMB-209ENST00000474157 MYCBPQ99417 103 aaPredicted RBP8.94□□□□□ -0.98
GPNMB-209ENST00000474157 BRMS1Q9HCU9 246 aa8.94□□□□□ -0.98
GPNMB-209ENST00000474157 CALCOCO1Q9P1Z2 691 aa8.94□□□□□ -0.98
GPNMB-209ENST00000474157 BCS1LQ9Y276 419 aa8.94□□□□□ -0.98
GPNMB-209ENST00000474157 TULP2O00295 520 aa8.93□□□□□ -0.98
GPNMB-209ENST00000474157 NDUFB5O43674 189 aa8.93□□□□□ -0.98
GPNMB-209ENST00000474157 KIF1CO43896 1103 aaKnown RBP8.93□□□□□ -0.98
GPNMB-209ENST00000474157 MAN1A2O60476 641 aa8.93□□□□□ -0.98
GPNMB-209ENST00000474157 KCNA6P17658 529 aa8.93□□□□□ -0.98
GPNMB-209ENST00000474157 RBM6P78332 1123 aaKnown RBP8.93□□□□□ -0.98
GPNMB-209ENST00000474157 OS9Q13438 667 aaPredicted RBP8.93□□□□□ -0.98
GPNMB-209ENST00000474157 BECN1Q14457 450 aa8.93□□□□□ -0.98
GPNMB-209ENST00000474157 ZKSCAN8Q15776 578 aaPredicted RBP8.93□□□□□ -0.98
GPNMB-209ENST00000474157 HIF1AQ16665 826 aa8.93□□□□□ -0.98
GPNMB-209ENST00000474157 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.93□□□□□ -0.98
GPNMB-209ENST00000474157 ARSJQ5FYB0 599 aaPredicted RBP8.93□□□□□ -0.98
GPNMB-209ENST00000474157 ZSCAN30Q86W11 494 aa8.93□□□□□ -0.98
GPNMB-209ENST00000474157 IRX2Q9BZI1 471 aaPredicted RBP8.93□□□□□ -0.98
GPNMB-209ENST00000474157 GPAMQ9HCL2 828 aa8.93□□□□□ -0.98
GPNMB-209ENST00000474157 TERF2IPQ9NYB0 399 aa8.93□□□□□ -0.98
GPNMB-209ENST00000474157 FAM13BQ9NYF5 915 aa8.93□□□□□ -0.98
GPNMB-209ENST00000474157 EID1Q9Y6B2 187 aa8.93□□□□□ -0.98
GPNMB-209ENST00000474157 IQGAP1P46940 1657 aa8.92□□□□□ -0.98
GPNMB-209ENST00000474157 PLXNC1O60486 1568 aa8.92□□□□□ -0.98
GPNMB-209ENST00000474157 LRRC9Q6ZRR7 1453 aa8.92□□□□□ -0.98
GPNMB-209ENST00000474157 DHX29Q7Z478 1369 aaKnown RBP8.92□□□□□ -0.98
GPNMB-209ENST00000474157 ANKRD33BA6NCL7 494 aa8.92□□□□□ -0.98
GPNMB-209ENST00000474157 SOBPA7XYQ1 873 aa8.92□□□□□ -0.98
GPNMB-209ENST00000474157 TGFBR3LH3BV60 316 aa8.92□□□□□ -0.98
GPNMB-209ENST00000474157 FZD6O60353 706 aa8.92□□□□□ -0.98
GPNMB-209ENST00000474157 LTKP29376 864 aa8.92□□□□□ -0.98
GPNMB-209ENST00000474157 ZAP70P43403 619 aa8.92□□□□□ -0.98
GPNMB-209ENST00000474157 MAP2K1Q02750 393 aaPredicted RBP8.92□□□□□ -0.98
GPNMB-209ENST00000474157 TREML1Q86YW5 311 aa8.92□□□□□ -0.98
GPNMB-209ENST00000474157 ZNF280CQ8ND82 737 aa8.92□□□□□ -0.98
GPNMB-209ENST00000474157 SUSD3Q96L08 255 aa8.92□□□□□ -0.98
GPNMB-209ENST00000474157 ASB16Q96NS5 453 aa8.92□□□□□ -0.98
GPNMB-209ENST00000474157 CCDC87Q9NVE4 849 aa8.92□□□□□ -0.98
GPNMB-209ENST00000474157 CFDP1Q9UEE9 299 aaPredicted RBP8.92□□□□□ -0.98
GPNMB-209ENST00000474157 GPC6Q9Y625 555 aaPredicted RBP8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms