RNA–Protein interactions for RNA: ENST00000473978.5

PCYT1A-214, Transcript of phosphate cytidylyltransferase 1, choline, alpha, humanhuman

TSL 1 (best)

Gene PCYT1A, Length 1,430 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1A-214ENST00000473978 SOX1O00570 391 aaPredicted RBP16.79■□□□□ 0.28
PCYT1A-214ENST00000473978 RPS8P62241 208 aaKnown RBP16.79■□□□□ 0.28
PCYT1A-214ENST00000473978 AIMP1Q12904 312 aaKnown RBP16.79■□□□□ 0.28
PCYT1A-214ENST00000473978 USP17L1Q7RTZ2 530 aa16.79■□□□□ 0.28
PCYT1A-214ENST00000473978 WNK4Q96J92 1243 aa16.79■□□□□ 0.28
PCYT1A-214ENST00000473978 CLMNQ96JQ2 1002 aa16.79■□□□□ 0.28
PCYT1A-214ENST00000473978 FAM89AQ96GI7 184 aa16.78■□□□□ 0.28
PCYT1A-214ENST00000473978 ANKIB1Q9P2G1 1089 aa16.78■□□□□ 0.28
PCYT1A-214ENST00000473978 GGA1Q9UJY5 639 aa16.78■□□□□ 0.28
PCYT1A-214ENST00000473978 NUDCQ9Y266 331 aa16.78■□□□□ 0.28
PCYT1A-214ENST00000473978 SASH1O94885 1247 aa16.77■□□□□ 0.27
PCYT1A-214ENST00000473978 XAGE3Q8WTP9 111 aa16.77■□□□□ 0.27
PCYT1A-214ENST00000473978 LRCH3Q96II8 777 aa16.77■□□□□ 0.27
PCYT1A-214ENST00000473978 PTPN18Q99952 460 aa16.77■□□□□ 0.27
PCYT1A-214ENST00000473978 MXD3Q9BW11 206 aa16.77■□□□□ 0.27
PCYT1A-214ENST00000473978 LAMB1P07942 1786 aa16.76■□□□□ 0.27
PCYT1A-214ENST00000473978 OTUD7BQ6GQQ9 843 aa16.76■□□□□ 0.27
PCYT1A-214ENST00000473978 SH3TC2Q8TF17 1288 aa16.76■□□□□ 0.27
PCYT1A-214ENST00000473978 CFAP53Q96M91 514 aa16.76■□□□□ 0.27
PCYT1A-214ENST00000473978 PODNQ7Z5L7 613 aa16.75■□□□□ 0.27
PCYT1A-214ENST00000473978 OGFOD1Q8N543 542 aa16.75■□□□□ 0.27
PCYT1A-214ENST00000473978 GJA5P36382 358 aa16.74■□□□□ 0.27
PCYT1A-214ENST00000473978 MAP3K11Q16584 847 aa16.74■□□□□ 0.27
PCYT1A-214ENST00000473978 RTL5Q5HYW3 569 aaPredicted RBP16.74■□□□□ 0.27
PCYT1A-214ENST00000473978 APOBEC3FQ8IUX4 373 aaKnown RBP16.74■□□□□ 0.27
PCYT1A-214ENST00000473978 SHISA4Q96DD7 197 aa16.74■□□□□ 0.27
PCYT1A-214ENST00000473978 DACT2Q5SW24 774 aa16.73■□□□□ 0.27
PCYT1A-214ENST00000473978 COL25A1Q9BXS0 654 aaPredicted RBP16.73■□□□□ 0.27
PCYT1A-214ENST00000473978 SEC31BQ9NQW1 1179 aa16.73■□□□□ 0.27
PCYT1A-214ENST00000473978 SPTBN5Q9NRC6 3674 aaKnown RBP16.73■□□□□ 0.27
PCYT1A-214ENST00000473978 TESPA1A2RU30 521 aaPredicted RBP16.72■□□□□ 0.27
PCYT1A-214ENST00000473978 DLG5Q8TDM6 1919 aa16.72■□□□□ 0.27
PCYT1A-214ENST00000473978 SSC5DA1L4H1 1573 aa16.72■□□□□ 0.27
PCYT1A-214ENST00000473978 ARHGEF6Q15052 776 aa16.71■□□□□ 0.27
PCYT1A-214ENST00000473978 DEFB129Q9H1M3 183 aa16.71■□□□□ 0.27
PCYT1A-214ENST00000473978 A0A1W2PPC1 479 aa16.7■□□□□ 0.26
PCYT1A-214ENST00000473978 IRS4O14654 1257 aaPredicted RBP16.7■□□□□ 0.26
PCYT1A-214ENST00000473978 UBE2Q1Q7Z7E8 422 aa16.7■□□□□ 0.26
PCYT1A-214ENST00000473978 ISCA1Q9BUE6 129 aa16.7■□□□□ 0.26
PCYT1A-214ENST00000473978 ZNF646O15015 1829 aaPredicted RBP16.7■□□□□ 0.26
PCYT1A-214ENST00000473978 ATP5J2-PTCD1G3V325 749 aa16.7■□□□□ 0.26
PCYT1A-214ENST00000473978 ZBTB7BO15156 539 aaPredicted RBP16.7■□□□□ 0.26
PCYT1A-214ENST00000473978 PPP1R12BO60237 982 aaPredicted RBP16.7■□□□□ 0.26
PCYT1A-214ENST00000473978 TSPYL4Q9UJ04 414 aa16.7■□□□□ 0.26
PCYT1A-214ENST00000473978 MTFR1Q15390 333 aa16.69■□□□□ 0.26
PCYT1A-214ENST00000473978 FBXW7Q969H0 707 aa16.69■□□□□ 0.26
PCYT1A-214ENST00000473978 ZBED3Q96IU2 234 aaPredicted RBP16.69■□□□□ 0.26
PCYT1A-214ENST00000473978 HTATIP2Q9BUP3 242 aa16.69■□□□□ 0.26
PCYT1A-214ENST00000473978 NR2E3Q9Y5X4 410 aa16.69■□□□□ 0.26
PCYT1A-214ENST00000473978 XDHP47989 1333 aa16.69■□□□□ 0.26
PCYT1A-214ENST00000473978 UNCXA6NJT0 531 aa16.68■□□□□ 0.26
PCYT1A-214ENST00000473978 ATP2B4P23634 1241 aa16.68■□□□□ 0.26
PCYT1A-214ENST00000473978 ARHGAP39Q9C0H5 1083 aa16.68■□□□□ 0.26
PCYT1A-214ENST00000473978 MYO3BQ8WXR4 1341 aa16.68■□□□□ 0.26
PCYT1A-214ENST00000473978 COL1A1P02452 1464 aaPredicted RBP16.67■□□□□ 0.26
PCYT1A-214ENST00000473978 STRIP1Q5VSL9 837 aa16.67■□□□□ 0.26
PCYT1A-214ENST00000473978 MS4A4AQ96JQ5 239 aa16.67■□□□□ 0.26
PCYT1A-214ENST00000473978 ZSWIM8A7E2V4 1837 aa16.66■□□□□ 0.26
PCYT1A-214ENST00000473978 MMP14P50281 582 aa16.66■□□□□ 0.26
PCYT1A-214ENST00000473978 TAF1CQ15572 869 aaPredicted RBP16.66■□□□□ 0.26
PCYT1A-214ENST00000473978 KIAA0825Q8IV33 1275 aa16.66■□□□□ 0.26
PCYT1A-214ENST00000473978 DEFB123Q8N688 67 aa16.66■□□□□ 0.26
PCYT1A-214ENST00000473978 PLBD2Q8NHP8 589 aa16.66■□□□□ 0.26
PCYT1A-214ENST00000473978 ZFYVE28Q9HCC9 887 aa16.66■□□□□ 0.26
PCYT1A-214ENST00000473978 USP2O75604 605 aaPredicted RBP16.65■□□□□ 0.26
PCYT1A-214ENST00000473978 Q7L0L9 218 aa16.65■□□□□ 0.26
PCYT1A-214ENST00000473978 BRI3BPQ8WY22 251 aa16.65■□□□□ 0.26
PCYT1A-214ENST00000473978 STAP2Q9UGK3 403 aa16.65■□□□□ 0.26
PCYT1A-214ENST00000473978 STXBP5LQ9Y2K9 1186 aa16.65■□□□□ 0.26
PCYT1A-214ENST00000473978 EYSQ5T1H1 3165 aa16.65■□□□□ 0.26
PCYT1A-214ENST00000473978 MED23Q9ULK4 1368 aa16.64■□□□□ 0.25
PCYT1A-214ENST00000473978 IREB2P48200 963 aaKnown RBP16.64■□□□□ 0.25
PCYT1A-214ENST00000473978 NBPF12Q5TAG4 269 aaPredicted RBP16.64■□□□□ 0.25
PCYT1A-214ENST00000473978 ANKRD13DQ6ZTN6 518 aa16.64■□□□□ 0.25
PCYT1A-214ENST00000473978 ANKRD13AQ8IZ07 590 aa16.64■□□□□ 0.25
PCYT1A-214ENST00000473978 OPTNQ96CV9 577 aa16.64■□□□□ 0.25
PCYT1A-214ENST00000473978 CCDC85AQ96PX6 553 aaPredicted RBP16.64■□□□□ 0.25
PCYT1A-214ENST00000473978 NEFMP07197 916 aa16.63■□□□□ 0.25
PCYT1A-214ENST00000473978 GJA8P48165 433 aa16.63■□□□□ 0.25
PCYT1A-214ENST00000473978 NFE2L2Q16236 605 aa16.63■□□□□ 0.25
PCYT1A-214ENST00000473978 SUPT20HL1Q3ZLR7 823 aa16.63■□□□□ 0.25
PCYT1A-214ENST00000473978 NKX2-3Q8TAU0 364 aa16.63■□□□□ 0.25
PCYT1A-214ENST00000473978 ELP3Q9H9T3 547 aa16.63■□□□□ 0.25
PCYT1A-214ENST00000473978 PPP2R3BQ9Y5P8 575 aa16.63■□□□□ 0.25
PCYT1A-214ENST00000473978 CLSPNQ9HAW4 1339 aa16.63■□□□□ 0.25
PCYT1A-214ENST00000473978 LACTBP83111 547 aaPredicted RBP16.62■□□□□ 0.25
PCYT1A-214ENST00000473978 TTLL5Q6EMB2 1281 aa16.62■□□□□ 0.25
PCYT1A-214ENST00000473978 GPR153Q6NV75 609 aa16.62■□□□□ 0.25
PCYT1A-214ENST00000473978 FAM43AQ8N2R8 423 aa16.62■□□□□ 0.25
PCYT1A-214ENST00000473978 PLEKHF1Q96S99 279 aa16.62■□□□□ 0.25
PCYT1A-214ENST00000473978 CHPF2Q9P2E5 772 aa16.62■□□□□ 0.25
PCYT1A-214ENST00000473978 GJB1P08034 283 aa16.62■□□□□ 0.25
PCYT1A-214ENST00000473978 PPP2R1AP30153 589 aa16.62■□□□□ 0.25
PCYT1A-214ENST00000473978 TRIM28Q13263 835 aaKnown RBP16.62■□□□□ 0.25
PCYT1A-214ENST00000473978 CCDC152Q4G0S7 254 aa16.62■□□□□ 0.25
PCYT1A-214ENST00000473978 TXNRD3Q86VQ6 643 aa16.62■□□□□ 0.25
PCYT1A-214ENST00000473978 ANKRD18AQ8IVF6 992 aa16.62■□□□□ 0.25
PCYT1A-214ENST00000473978 ZBTB38Q8NAP3 1195 aaPredicted RBP16.62■□□□□ 0.25
PCYT1A-214ENST00000473978 CNKSR2Q8WXI2 1034 aa16.62■□□□□ 0.25
PCYT1A-214ENST00000473978 COA1Q9GZY4 146 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms