RNA–Protein interactions for RNA: ENST00000473542.1

BBX-223, Transcript of BBX, HMG-box containing, humanhuman

TSL 3

Gene BBX, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBX-223ENST00000473542 CAPN12Q6ZSI9 719 aa8.02□□□□□ -1.13
BBX-223ENST00000473542 ETFBKMTQ8IXQ9 262 aa8.02□□□□□ -1.13
BBX-223ENST00000473542 GALNT11Q8NCW6 608 aa8.02□□□□□ -1.13
BBX-223ENST00000473542 BIN2Q9UBW5 565 aaPredicted RBP8.02□□□□□ -1.13
BBX-223ENST00000473542 ECM1Q16610 540 aa8.01□□□□□ -1.13
BBX-223ENST00000473542 COL13A1Q5TAT6 717 aaPredicted RBP8.01□□□□□ -1.13
BBX-223ENST00000473542 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.01□□□□□ -1.13
BBX-223ENST00000473542 SAP130Q9H0E3 1048 aa8.01□□□□□ -1.13
BBX-223ENST00000473542 TGFB1P01137 390 aa8□□□□□ -1.13
BBX-223ENST00000473542 HOXD8P13378 290 aaPredicted RBP8□□□□□ -1.13
BBX-223ENST00000473542 SOX18P35713 384 aa8□□□□□ -1.13
BBX-223ENST00000473542 ARHGAP4P98171 946 aa8□□□□□ -1.13
BBX-223ENST00000473542 TXNDC11Q6PKC3 985 aa8□□□□□ -1.13
BBX-223ENST00000473542 KCNK4Q9NYG8 393 aa8□□□□□ -1.13
BBX-223ENST00000473542 RAXQ9Y2V3 346 aa8□□□□□ -1.13
BBX-223ENST00000473542 LINC01387J3KSC0 135 aa7.99□□□□□ -1.13
BBX-223ENST00000473542 RANGAP1P46060 587 aaPredicted RBP7.99□□□□□ -1.13
BBX-223ENST00000473542 ATP11AP98196 1134 aa7.99□□□□□ -1.13
BBX-223ENST00000473542 NAA30Q147X3 362 aaPredicted RBP7.99□□□□□ -1.13
BBX-223ENST00000473542 ARMC10Q8N2F6 343 aa7.99□□□□□ -1.13
BBX-223ENST00000473542 COL17A1Q9UMD9 1497 aaPredicted RBP7.99□□□□□ -1.13
BBX-223ENST00000473542 TM4SF5O14894 197 aa7.98□□□□□ -1.13
BBX-223ENST00000473542 ALKBH2Q6NS38 261 aa7.98□□□□□ -1.13
BBX-223ENST00000473542 SRA1Q9HD15 236 aaKnown RBP7.98□□□□□ -1.13
BBX-223ENST00000473542 ANO2Q9NQ90 1003 aa7.98□□□□□ -1.13
BBX-223ENST00000473542 DCTN4Q9UJW0 460 aa7.98□□□□□ -1.13
BBX-223ENST00000473542 ADAMTS4O75173 837 aa7.97□□□□□ -1.13
BBX-223ENST00000473542 IGLV1-40P01703 118 aa7.97□□□□□ -1.13
BBX-223ENST00000473542 CDC25BP30305 580 aa7.97□□□□□ -1.13
BBX-223ENST00000473542 NLRP13Q86W25 1043 aa7.97□□□□□ -1.13
BBX-223ENST00000473542 ABTB2Q8N961 1025 aa7.97□□□□□ -1.13
BBX-223ENST00000473542 FOXD4L4Q8WXT5 416 aaPredicted RBP7.97□□□□□ -1.13
BBX-223ENST00000473542 LACRTQ9GZZ8 138 aa7.97□□□□□ -1.13
BBX-223ENST00000473542 RBSNQ9H1K0 784 aa7.97□□□□□ -1.13
BBX-223ENST00000473542 STIM2Q9P246 746 aa7.97□□□□□ -1.13
BBX-223ENST00000473542 PPME1Q9Y570 386 aa7.97□□□□□ -1.13
BBX-223ENST00000473542 BTBD11A6QL63 1104 aa7.96□□□□□ -1.14
BBX-223ENST00000473542 COL19A1Q14993 1142 aa7.96□□□□□ -1.14
BBX-223ENST00000473542 SLC51AQ86UW1 340 aa7.96□□□□□ -1.14
BBX-223ENST00000473542 MAP4K3Q8IVH8 894 aa7.96□□□□□ -1.14
BBX-223ENST00000473542 CITED4Q96RK1 184 aa7.96□□□□□ -1.14
BBX-223ENST00000473542 CARD10Q9BWT7 1032 aa7.96□□□□□ -1.14
BBX-223ENST00000473542 OAS3Q9Y6K5 1087 aaKnown RBP7.96□□□□□ -1.14
BBX-223ENST00000473542 KRTAP4-8A0A0G2JLE6 195 aa7.95□□□□□ -1.14
BBX-223ENST00000473542 RBM47A0AV96 593 aaKnown RBP7.95□□□□□ -1.14
BBX-223ENST00000473542 TNFRSF10BO14763 440 aa7.95□□□□□ -1.14
BBX-223ENST00000473542 BRD2P25440 801 aaKnown RBP7.95□□□□□ -1.14
BBX-223ENST00000473542 MTMR3Q13615 1198 aa7.95□□□□□ -1.14
BBX-223ENST00000473542 ACAD11Q709F0 780 aa7.95□□□□□ -1.14
BBX-223ENST00000473542 ZDHHC13Q8IUH4 622 aa7.95□□□□□ -1.14
BBX-223ENST00000473542 ZSCAN29Q8IWY8 852 aaPredicted RBP7.95□□□□□ -1.14
BBX-223ENST00000473542 OR13H1Q8NG92 308 aa7.95□□□□□ -1.14
BBX-223ENST00000473542 ASB16Q96NS5 453 aa7.95□□□□□ -1.14
BBX-223ENST00000473542 STOML1Q9UBI4 398 aa7.95□□□□□ -1.14
BBX-223ENST00000473542 KIAA1324LA8MWY0 1029 aaPredicted RBP7.94□□□□□ -1.14
BBX-223ENST00000473542 UBAP1LF5GYI3 381 aa7.94□□□□□ -1.14
BBX-223ENST00000473542 DDX3YO15523 660 aaKnown RBP7.94□□□□□ -1.14
BBX-223ENST00000473542 MPSTP25325 297 aa7.94□□□□□ -1.14
BBX-223ENST00000473542 NOM1Q5C9Z4 860 aaKnown RBP7.94□□□□□ -1.14
BBX-223ENST00000473542 CEP135Q66GS9 1140 aa7.94□□□□□ -1.14
BBX-223ENST00000473542 RBCK1Q9BYM8 510 aa7.94□□□□□ -1.14
BBX-223ENST00000473542 MAPK1P28482 360 aa7.93□□□□□ -1.14
BBX-223ENST00000473542 CD68P34810 354 aaPredicted RBP7.93□□□□□ -1.14
BBX-223ENST00000473542 KIAA1211Q6ZU35 1233 aa7.93□□□□□ -1.14
BBX-223ENST00000473542 RASSF4Q9H2L5 321 aa7.93□□□□□ -1.14
BBX-223ENST00000473542 HMX2A2RU54 273 aa7.92□□□□□ -1.14
BBX-223ENST00000473542 ANKRD33BA6NCL7 494 aa7.92□□□□□ -1.14
BBX-223ENST00000473542 DHX15O43143 795 aaKnown RBP7.92□□□□□ -1.14
BBX-223ENST00000473542 NDUFB5O43674 189 aa7.92□□□□□ -1.14
BBX-223ENST00000473542 ADAM11O75078 769 aa7.92□□□□□ -1.14
BBX-223ENST00000473542 COBLO75128 1261 aa7.92□□□□□ -1.14
BBX-223ENST00000473542 CYP2E1P05181 493 aaPredicted RBP7.92□□□□□ -1.14
BBX-223ENST00000473542 EIF1AXP47813 144 aaKnown RBP7.92□□□□□ -1.14
BBX-223ENST00000473542 IRAK1P51617 712 aa7.92□□□□□ -1.14
BBX-223ENST00000473542 GP2P55259 537 aaKnown RBP7.92□□□□□ -1.14
BBX-223ENST00000473542 NPAS4Q8IUM7 802 aa7.92□□□□□ -1.14
BBX-223ENST00000473542 TRIM42Q8IWZ5 723 aa7.92□□□□□ -1.14
BBX-223ENST00000473542 C7orf69Q9H7B7 122 aa7.92□□□□□ -1.14
BBX-223ENST00000473542 PAX4O43316 350 aa7.91□□□□□ -1.14
BBX-223ENST00000473542 TAL1P17542 331 aaPredicted RBP7.91□□□□□ -1.14
BBX-223ENST00000473542 EPHA1P21709 976 aa7.91□□□□□ -1.14
BBX-223ENST00000473542 NFIAQ12857 509 aa7.91□□□□□ -1.14
BBX-223ENST00000473542 UBASH3BQ8TF42 649 aa7.91□□□□□ -1.14
BBX-223ENST00000473542 FAM46AQ96IP4 442 aaKnown RBP7.91□□□□□ -1.14
BBX-223ENST00000473542 FMNL2Q96PY5 1086 aa7.91□□□□□ -1.14
BBX-223ENST00000473542 MUC3BQ9H195 1237 aa7.91□□□□□ -1.14
BBX-223ENST00000473542 SH2B1Q9NRF2 756 aaPredicted RBP7.91□□□□□ -1.14
BBX-223ENST00000473542 PRR19A6NJB7 356 aa7.9□□□□□ -1.14
BBX-223ENST00000473542 GSC2O15499 205 aa7.9□□□□□ -1.14
BBX-223ENST00000473542 SPINK2P20155 84 aa7.9□□□□□ -1.14
BBX-223ENST00000473542 CDC27P30260 824 aa7.9□□□□□ -1.14
BBX-223ENST00000473542 HYAL2Q12891 473 aa7.9□□□□□ -1.14
BBX-223ENST00000473542 CACTIN-AS1Q8N1I8 211 aa7.9□□□□□ -1.14
BBX-223ENST00000473542 DCAF11Q8TEB1 546 aa7.9□□□□□ -1.14
BBX-223ENST00000473542 UTP4Q969X6 686 aaKnown RBP7.9□□□□□ -1.14
BBX-223ENST00000473542 BRPF3Q9ULD4 1205 aa7.9□□□□□ -1.14
BBX-223ENST00000473542 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.9□□□□□ -1.14
BBX-223ENST00000473542 FSCN2O14926 492 aa7.89□□□□□ -1.15
BBX-223ENST00000473542 ZBTB39O15060 712 aa7.89□□□□□ -1.15
BBX-223ENST00000473542 FZD6O60353 706 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms