RNA–Protein interactions for RNA: ENST00000473334.1

PTP4A1-203, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 3

Gene PTP4A1, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-203ENST00000473334 RABL6Q3YEC7 729 aaPredicted RBP28.38■■■□□ 2.13
PTP4A1-203ENST00000473334 TBC1D10BQ4KMP7 808 aaPredicted RBP28.38■■■□□ 2.13
PTP4A1-203ENST00000473334 HELBQ8NG08 1087 aaPredicted RBP28.38■■■□□ 2.13
PTP4A1-203ENST00000473334 API5Q9BZZ5 524 aaKnown RBP28.38■■■□□ 2.13
PTP4A1-203ENST00000473334 CNNM1Q9NRU3 951 aa28.38■■■□□ 2.13
PTP4A1-203ENST00000473334 TAF5LO75529 589 aa28.37■■■□□ 2.13
PTP4A1-203ENST00000473334 MKRN1Q9UHC7 482 aaKnown RBP28.37■■■□□ 2.13
PTP4A1-203ENST00000473334 CNTNAP1P78357 1384 aa28.37■■■□□ 2.13
PTP4A1-203ENST00000473334 TRAF5O00463 557 aa28.36■■■□□ 2.13
PTP4A1-203ENST00000473334 FMR1Q06787 632 aaKnown RBP eCLIP28.36■■■□□ 2.13
PTP4A1-203ENST00000473334 ANKRD44Q8N8A2 993 aa28.36■■■□□ 2.13
PTP4A1-203ENST00000473334 KIF16BQ96L93 1317 aa28.36■■■□□ 2.13
PTP4A1-203ENST00000473334 EGFRP00533 1210 aa28.35■■■□□ 2.13
PTP4A1-203ENST00000473334 C15orf52Q6ZUT6 534 aaKnown RBP28.35■■■□□ 2.13
PTP4A1-203ENST00000473334 GMLQ99445 158 aa28.35■■■□□ 2.13
PTP4A1-203ENST00000473334 GLIS2Q9BZE0 524 aaPredicted RBP28.35■■■□□ 2.13
PTP4A1-203ENST00000473334 SNAP23O00161 211 aa28.34■■■□□ 2.13
PTP4A1-203ENST00000473334 KIF4BQ2VIQ3 1234 aa28.34■■■□□ 2.13
PTP4A1-203ENST00000473334 RBM26Q5T8P6 1007 aaKnown RBP28.34■■■□□ 2.13
PTP4A1-203ENST00000473334 IRS2Q9Y4H2 1338 aa28.34■■■□□ 2.13
PTP4A1-203ENST00000473334 ZNF280AP59817 542 aaPredicted RBP28.33■■■□□ 2.13
PTP4A1-203ENST00000473334 DACT2Q5SW24 774 aa28.33■■■□□ 2.13
PTP4A1-203ENST00000473334 STRIP1Q5VSL9 837 aa28.33■■■□□ 2.13
PTP4A1-203ENST00000473334 CDC37L1Q7L3B6 337 aa28.33■■■□□ 2.13
PTP4A1-203ENST00000473334 FBXW7Q969H0 707 aa28.33■■■□□ 2.13
PTP4A1-203ENST00000473334 PLIN1O60240 522 aa28.32■■■□□ 2.12
PTP4A1-203ENST00000473334 USP17L8P0C7I0 530 aa28.31■■■□□ 2.12
PTP4A1-203ENST00000473334 ARHGAP45Q92619 1136 aa28.31■■■□□ 2.12
PTP4A1-203ENST00000473334 PUS3Q9BZE2 481 aaKnown RBP28.31■■■□□ 2.12
PTP4A1-203ENST00000473334 CD209Q9NNX6 404 aa28.31■■■□□ 2.12
PTP4A1-203ENST00000473334 ABT1Q9ULW3 272 aaKnown RBP28.31■■■□□ 2.12
PTP4A1-203ENST00000473334 MYO3BQ8WXR4 1341 aa28.31■■■□□ 2.12
PTP4A1-203ENST00000473334 PCNTO95613 3336 aa28.3■■■□□ 2.12
PTP4A1-203ENST00000473334 RASSF10A6NK89 507 aa28.3■■■□□ 2.12
PTP4A1-203ENST00000473334 CST9Q5W186 159 aa28.3■■■□□ 2.12
PTP4A1-203ENST00000473334 POLR2AP24928 1970 aaKnown RBP28.3■■■□□ 2.12
PTP4A1-203ENST00000473334 TTLL5Q6EMB2 1281 aa28.29■■■□□ 2.12
PTP4A1-203ENST00000473334 ZNF804AQ7Z570 1209 aa28.29■■■□□ 2.12
PTP4A1-203ENST00000473334 RIPOR2Q9Y4F9 1068 aa28.29■■■□□ 2.12
PTP4A1-203ENST00000473334 MROH5Q6ZUA9 1318 aa28.28■■■□□ 2.12
PTP4A1-203ENST00000473334 UBTFL1P0CB47 393 aaPredicted RBP28.28■■■□□ 2.12
PTP4A1-203ENST00000473334 UBE4AQ14139 1066 aa28.28■■■□□ 2.12
PTP4A1-203ENST00000473334 DEFB115Q30KQ5 88 aa28.28■■■□□ 2.12
PTP4A1-203ENST00000473334 DCPSQ96C86 337 aaKnown RBP28.28■■■□□ 2.12
PTP4A1-203ENST00000473334 MXD3Q9BW11 206 aa28.28■■■□□ 2.12
PTP4A1-203ENST00000473334 MYOZ2Q9NPC6 264 aa28.28■■■□□ 2.12
PTP4A1-203ENST00000473334 CELF2O95319 508 aaKnown RBP28.27■■■□□ 2.12
PTP4A1-203ENST00000473334 GTF2IP78347 998 aa28.27■■■□□ 2.12
PTP4A1-203ENST00000473334 USP48Q86UV5 1035 aa28.27■■■□□ 2.12
PTP4A1-203ENST00000473334 VEGFBP49765 207 aa28.26■■■□□ 2.11
PTP4A1-203ENST00000473334 KRT26Q7Z3Y9 468 aa28.26■■■□□ 2.11
PTP4A1-203ENST00000473334 GGA3Q9NZ52 723 aa28.26■■■□□ 2.11
PTP4A1-203ENST00000473334 ZBED9Q6R2W3 1325 aa28.25■■■□□ 2.11
PTP4A1-203ENST00000473334 IPO8O15397 1037 aaKnown RBP28.25■■■□□ 2.11
PTP4A1-203ENST00000473334 IL1R1P14778 569 aa28.25■■■□□ 2.11
PTP4A1-203ENST00000473334 LRRC24Q50LG9 513 aa28.25■■■□□ 2.11
PTP4A1-203ENST00000473334 OGFOD1Q8N543 542 aa28.25■■■□□ 2.11
PTP4A1-203ENST00000473334 TLL2Q9Y6L7 1015 aa28.25■■■□□ 2.11
PTP4A1-203ENST00000473334 BCAR3O75815 825 aa28.24■■■□□ 2.11
PTP4A1-203ENST00000473334 SCARF1Q14162 830 aa28.24■■■□□ 2.11
PTP4A1-203ENST00000473334 ZNF408Q9H9D4 720 aa28.24■■■□□ 2.11
PTP4A1-203ENST00000473334 HDAC5Q9UQL6 1122 aa28.24■■■□□ 2.11
PTP4A1-203ENST00000473334 ASTN2O75129 1339 aaPredicted RBP28.23■■■□□ 2.11
PTP4A1-203ENST00000473334 MMP14P50281 582 aa28.23■■■□□ 2.11
PTP4A1-203ENST00000473334 METTL24Q5JXM2 366 aa28.23■■■□□ 2.11
PTP4A1-203ENST00000473334 INTS3Q68E01 1043 aaKnown RBP28.23■■■□□ 2.11
PTP4A1-203ENST00000473334 KLHDC4Q8TBB5 520 aa28.23■■■□□ 2.11
PTP4A1-203ENST00000473334 ADM5C9JUS6 153 aa28.22■■■□□ 2.11
PTP4A1-203ENST00000473334 SULF1Q8IWU6 871 aa28.22■■■□□ 2.11
PTP4A1-203ENST00000473334 HSPA1AP0DMV8 641 aaKnown RBP28.21■■■□□ 2.11
PTP4A1-203ENST00000473334 HSPA1BP0DMV9 641 aaKnown RBP28.21■■■□□ 2.11
PTP4A1-203ENST00000473334 TRIM27P14373 513 aa28.21■■■□□ 2.11
PTP4A1-203ENST00000473334 RFX5P48382 616 aaPredicted RBP28.21■■■□□ 2.11
PTP4A1-203ENST00000473334 ANGEL2Q5VTE6 544 aaKnown RBP28.21■■■□□ 2.11
PTP4A1-203ENST00000473334 ATF7IPQ6VMQ6 1270 aa28.21■■■□□ 2.11
PTP4A1-203ENST00000473334 FRAT1Q92837 279 aaPredicted RBP28.21■■■□□ 2.11
PTP4A1-203ENST00000473334 HDAC9Q9UKV0 1011 aa28.21■■■□□ 2.11
PTP4A1-203ENST00000473334 DLK2Q6UY11 383 aa28.2■■■□□ 2.1
PTP4A1-203ENST00000473334 KIAA0825Q8IV33 1275 aa28.2■■■□□ 2.1
PTP4A1-203ENST00000473334 VGLL2Q8N8G2 317 aa28.2■■■□□ 2.1
PTP4A1-203ENST00000473334 MEIS3Q99687 375 aa28.2■■■□□ 2.1
PTP4A1-203ENST00000473334 LRRFIP2Q9Y608 721 aaKnown RBP28.2■■■□□ 2.1
PTP4A1-203ENST00000473334 PITPNM2Q9BZ72 1349 aa28.19■■■□□ 2.1
PTP4A1-203ENST00000473334 WDR33Q9C0J8 1336 aaKnown RBP28.19■■■□□ 2.1
PTP4A1-203ENST00000473334 PDE8BO95263 885 aa28.19■■■□□ 2.1
PTP4A1-203ENST00000473334 PTPN12Q05209 780 aaKnown RBP28.19■■■□□ 2.1
PTP4A1-203ENST00000473334 SAPCD2Q86UD0 394 aa28.19■■■□□ 2.1
PTP4A1-203ENST00000473334 HIBADHP31937 336 aaKnown RBP28.18■■■□□ 2.1
PTP4A1-203ENST00000473334 GYG1P46976 350 aa28.18■■■□□ 2.1
PTP4A1-203ENST00000473334 FKBP1AP62942 108 aaKnown RBP28.18■■■□□ 2.1
PTP4A1-203ENST00000473334 PAXIP1Q6ZW49 1069 aaPredicted RBP28.18■■■□□ 2.1
PTP4A1-203ENST00000473334 FAM84BQ96KN1 310 aaPredicted RBP28.18■■■□□ 2.1
PTP4A1-203ENST00000473334 THSD7BQ9C0I4 1608 aa28.18■■■□□ 2.1
PTP4A1-203ENST00000473334 EYA2O00167 538 aa28.17■■■□□ 2.1
PTP4A1-203ENST00000473334 GNAI3P08754 354 aa28.17■■■□□ 2.1
PTP4A1-203ENST00000473334 ECE1P42892 770 aa28.17■■■□□ 2.1
PTP4A1-203ENST00000473334 NBPF9Q3BBW0 867 aa28.17■■■□□ 2.1
PTP4A1-203ENST00000473334 CERS5Q8N5B7 392 aa28.17■■■□□ 2.1
PTP4A1-203ENST00000473334 TDRD7Q8NHU6 1098 aaKnown RBP28.17■■■□□ 2.1
PTP4A1-203ENST00000473334 TNNQ9UQP3 1299 aa28.17■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms