RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 CACTINQ8WUQ7 758 aaKnown RBP24.79■■□□□ 1.56
COL18A1-207ENST00000473212 ANKRD7Q92527 254 aa24.79■■□□□ 1.56
COL18A1-207ENST00000473212 GLI3P10071 1580 aa24.79■■□□□ 1.56
COL18A1-207ENST00000473212 H7C1W4 665 aa24.78■■□□□ 1.56
COL18A1-207ENST00000473212 C11orf57Q6ZUT1 292 aaPredicted RBP24.78■■□□□ 1.56
COL18A1-207ENST00000473212 DHX32Q7L7V1 743 aaKnown RBP24.78■■□□□ 1.56
COL18A1-207ENST00000473212 SH3TC1Q8TE82 1336 aa24.78■■□□□ 1.56
COL18A1-207ENST00000473212 PFKFB2O60825 505 aa24.78■■□□□ 1.56
COL18A1-207ENST00000473212 HSPD1P10809 573 aaKnown RBP24.78■■□□□ 1.56
COL18A1-207ENST00000473212 USP28Q96RU2 1077 aa24.78■■□□□ 1.56
COL18A1-207ENST00000473212 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.78■■□□□ 1.56
COL18A1-207ENST00000473212 COL18A1P39060 1754 aa24.78■■□□□ 1.56
COL18A1-207ENST00000473212 MAST3O60307 1309 aa24.77■■□□□ 1.56
COL18A1-207ENST00000473212 E7EWF7 191 aa24.77■■□□□ 1.56
COL18A1-207ENST00000473212 GOLGA6L19H0YKK7 550 aa24.77■■□□□ 1.56
COL18A1-207ENST00000473212 M0R2C6 588 aa24.77■■□□□ 1.56
COL18A1-207ENST00000473212 TNNT1P13805 278 aa24.77■■□□□ 1.56
COL18A1-207ENST00000473212 IQCB1Q15051 598 aa24.77■■□□□ 1.56
COL18A1-207ENST00000473212 OTUD7BQ6GQQ9 843 aa24.77■■□□□ 1.56
COL18A1-207ENST00000473212 RAB11FIP4Q86YS3 637 aa24.77■■□□□ 1.56
COL18A1-207ENST00000473212 CCAR1Q8IX12 1150 aaKnown RBP24.77■■□□□ 1.56
COL18A1-207ENST00000473212 FBXW7Q969H0 707 aa24.77■■□□□ 1.56
COL18A1-207ENST00000473212 RFX7Q2KHR2 1363 aa24.76■■□□□ 1.55
COL18A1-207ENST00000473212 HAND2P61296 217 aa24.76■■□□□ 1.55
COL18A1-207ENST00000473212 ILDR1Q86SU0 546 aaPredicted RBP24.76■■□□□ 1.55
COL18A1-207ENST00000473212 A0A1B0GUL7 405 aa24.75■■□□□ 1.55
COL18A1-207ENST00000473212 SPDYE4A6NLX3 237 aa24.75■■□□□ 1.55
COL18A1-207ENST00000473212 CAVIN2O95810 425 aa24.75■■□□□ 1.55
COL18A1-207ENST00000473212 EXOSC10Q01780 885 aaKnown RBP24.75■■□□□ 1.55
COL18A1-207ENST00000473212 ZMYM1Q5SVZ6 1142 aa24.75■■□□□ 1.55
COL18A1-207ENST00000473212 LLPHQ9BRT6 129 aaKnown RBP24.75■■□□□ 1.55
COL18A1-207ENST00000473212 ZSCAN20P17040 1043 aaPredicted RBP24.75■■□□□ 1.55
COL18A1-207ENST00000473212 CWC25Q9NXE8 425 aaPredicted RBP24.75■■□□□ 1.55
COL18A1-207ENST00000473212 ZNF330Q9Y3S2 320 aaPredicted RBP24.75■■□□□ 1.55
COL18A1-207ENST00000473212 ARID5BQ14865 1188 aa24.74■■□□□ 1.55
COL18A1-207ENST00000473212 OSBP2Q969R2 916 aa24.74■■□□□ 1.55
COL18A1-207ENST00000473212 RCOR1Q9UKL0 485 aa24.74■■□□□ 1.55
COL18A1-207ENST00000473212 SMTNL1A8MU46 457 aa24.74■■□□□ 1.55
COL18A1-207ENST00000473212 IFIT1P09914 478 aaKnown RBP24.74■■□□□ 1.55
COL18A1-207ENST00000473212 ATF3P18847 181 aa24.74■■□□□ 1.55
COL18A1-207ENST00000473212 U2AF2P26368 475 aaKnown RBP eCLIP24.74■■□□□ 1.55
COL18A1-207ENST00000473212 CDC25BP30305 580 aa24.74■■□□□ 1.55
COL18A1-207ENST00000473212 ADORA1P30542 326 aa24.74■■□□□ 1.55
COL18A1-207ENST00000473212 FKBP4Q02790 459 aaKnown RBP eCLIP24.74■■□□□ 1.55
COL18A1-207ENST00000473212 TPD52L1Q16890 204 aaPredicted RBP24.74■■□□□ 1.55
COL18A1-207ENST00000473212 PALLDQ8WX93 1383 aa24.74■■□□□ 1.55
COL18A1-207ENST00000473212 NAA16Q6N069 864 aaPredicted RBP24.73■■□□□ 1.55
COL18A1-207ENST00000473212 GJB4Q9NTQ9 266 aa24.73■■□□□ 1.55
COL18A1-207ENST00000473212 MST1RQ04912 1400 aa24.73■■□□□ 1.55
COL18A1-207ENST00000473212 NCBP1Q09161 790 aaKnown RBP24.73■■□□□ 1.55
COL18A1-207ENST00000473212 STX1AQ16623 288 aa24.73■■□□□ 1.55
COL18A1-207ENST00000473212 HMGB1P09429 215 aaKnown RBP24.72■■□□□ 1.55
COL18A1-207ENST00000473212 PDIA3P30101 505 aaKnown RBP24.72■■□□□ 1.55
COL18A1-207ENST00000473212 PI16Q6UXB8 463 aa24.72■■□□□ 1.55
COL18A1-207ENST00000473212 BCL11BQ9C0K0 894 aaPredicted RBP24.72■■□□□ 1.55
COL18A1-207ENST00000473212 TMEM94Q12767 1356 aa24.72■■□□□ 1.55
COL18A1-207ENST00000473212 FOXP2O15409 715 aa24.72■■□□□ 1.55
COL18A1-207ENST00000473212 SNW1Q13573 536 aaKnown RBP24.72■■□□□ 1.55
COL18A1-207ENST00000473212 SCARF1Q14162 830 aa24.72■■□□□ 1.55
COL18A1-207ENST00000473212 EYA2O00167 538 aa24.71■■□□□ 1.55
COL18A1-207ENST00000473212 CTAGE5O15320 804 aa24.71■■□□□ 1.55
COL18A1-207ENST00000473212 DMTNQ08495 405 aa24.71■■□□□ 1.55
COL18A1-207ENST00000473212 SARM1Q6SZW1 724 aa24.71■■□□□ 1.55
COL18A1-207ENST00000473212 CCDC73Q6ZRK6 1079 aa24.71■■□□□ 1.55
COL18A1-207ENST00000473212 LRRC8AQ8IWT6 810 aa24.71■■□□□ 1.55
COL18A1-207ENST00000473212 DSCC1Q9BVC3 393 aa24.71■■□□□ 1.55
COL18A1-207ENST00000473212 HELLSQ9NRZ9 838 aa24.71■■□□□ 1.55
COL18A1-207ENST00000473212 KIF1AQ12756 1690 aa24.71■■□□□ 1.55
COL18A1-207ENST00000473212 FDPSP14324 419 aaKnown RBP24.71■■□□□ 1.55
COL18A1-207ENST00000473212 SALL1Q9NSC2 1324 aa24.7■■□□□ 1.54
COL18A1-207ENST00000473212 BECN2A8MW95 431 aa24.7■■□□□ 1.54
COL18A1-207ENST00000473212 IL15P40933 162 aaPredicted RBP24.7■■□□□ 1.54
COL18A1-207ENST00000473212 TAOK2Q9UL54 1235 aa24.7■■□□□ 1.54
COL18A1-207ENST00000473212 MYH15Q9Y2K3 1946 aa24.7■■□□□ 1.54
COL18A1-207ENST00000473212 TJP1Q07157 1748 aa24.69■■□□□ 1.54
COL18A1-207ENST00000473212 RNF113AO15541 343 aaKnown RBP24.69■■□□□ 1.54
COL18A1-207ENST00000473212 MRFAP1L1Q96HT8 127 aa24.69■■□□□ 1.54
COL18A1-207ENST00000473212 AGXT2Q9BYV1 514 aa24.69■■□□□ 1.54
COL18A1-207ENST00000473212 KINO60870 393 aaKnown RBP24.69■■□□□ 1.54
COL18A1-207ENST00000473212 SYNE4Q8N205 404 aa24.69■■□□□ 1.54
COL18A1-207ENST00000473212 PAXBP1Q9Y5B6 917 aa24.69■■□□□ 1.54
COL18A1-207ENST00000473212 NAA30Q147X3 362 aaPredicted RBP24.68■■□□□ 1.54
COL18A1-207ENST00000473212 ZNF592Q92610 1267 aa24.68■■□□□ 1.54
COL18A1-207ENST00000473212 ZNF396Q96N95 335 aaPredicted RBP24.68■■□□□ 1.54
COL18A1-207ENST00000473212 DENND2AQ9ULE3 1009 aa24.68■■□□□ 1.54
COL18A1-207ENST00000473212 ME1P48163 572 aa24.68■■□□□ 1.54
COL18A1-207ENST00000473212 DHX40Q8IX18 779 aaKnown RBP24.68■■□□□ 1.54
COL18A1-207ENST00000473212 CCDC112Q8NEF3 446 aa24.68■■□□□ 1.54
COL18A1-207ENST00000473212 ENGASEQ8NFI3 743 aa24.68■■□□□ 1.54
COL18A1-207ENST00000473212 NKX2-3Q8TAU0 364 aa24.68■■□□□ 1.54
COL18A1-207ENST00000473212 USP27XA6NNY8 438 aa24.67■■□□□ 1.54
COL18A1-207ENST00000473212 FSIP1Q8NA03 581 aa24.67■■□□□ 1.54
COL18A1-207ENST00000473212 ZHX1Q9UKY1 873 aaPredicted RBP24.67■■□□□ 1.54
COL18A1-207ENST00000473212 FAM160A1Q05DH4 1040 aa24.67■■□□□ 1.54
COL18A1-207ENST00000473212 CARMIL3Q8ND23 1372 aa24.67■■□□□ 1.54
COL18A1-207ENST00000473212 PKD1L3Q7Z443 1732 aa24.66■■□□□ 1.54
COL18A1-207ENST00000473212 WASHC4Q2M389 1173 aa24.66■■□□□ 1.54
COL18A1-207ENST00000473212 UTP14CQ5TAP6 766 aaKnown RBP24.66■■□□□ 1.54
COL18A1-207ENST00000473212 CEP135Q66GS9 1140 aa24.66■■□□□ 1.54
COL18A1-207ENST00000473212 FILIP1Q7Z7B0 1213 aa24.66■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms