RNA–Protein interactions for RNA: ENST00000472928.5

HDAC1-205, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-205ENST00000472928 MKI67P46013 3256 aaKnown RBP8.22□□□□□ -1.09
HDAC1-205ENST00000472928 SHTN1A0MZ66 631 aa8.21□□□□□ -1.1
HDAC1-205ENST00000472928 E9PSI1 815 aa8.21□□□□□ -1.1
HDAC1-205ENST00000472928 PPEF1O14829 653 aaPredicted RBP8.21□□□□□ -1.1
HDAC1-205ENST00000472928 HUNKP57058 714 aa8.21□□□□□ -1.1
HDAC1-205ENST00000472928 RIPK4P57078 832 aa8.21□□□□□ -1.1
HDAC1-205ENST00000472928 LMOD3Q0VAK6 560 aa8.21□□□□□ -1.1
HDAC1-205ENST00000472928 AOC3Q16853 763 aa8.21□□□□□ -1.1
HDAC1-205ENST00000472928 GRIPAP1Q4V328 841 aa8.21□□□□□ -1.1
HDAC1-205ENST00000472928 RPGRQ92834 1020 aaKnown RBP8.21□□□□□ -1.1
HDAC1-205ENST00000472928 CRAMP1Q96RY5 1269 aa8.21□□□□□ -1.1
HDAC1-205ENST00000472928 SAGE1Q9NXZ1 904 aa8.21□□□□□ -1.1
HDAC1-205ENST00000472928 ZNRF3Q9ULT6 936 aa8.21□□□□□ -1.1
HDAC1-205ENST00000472928 UBN2Q6ZU65 1347 aa8.21□□□□□ -1.1
HDAC1-205ENST00000472928 CDHR2Q9BYE9 1310 aa8.21□□□□□ -1.1
HDAC1-205ENST00000472928 IBTKQ9P2D0 1353 aaPredicted RBP8.21□□□□□ -1.1
HDAC1-205ENST00000472928 KIAA0100Q14667 2235 aaKnown RBP8.21□□□□□ -1.1
HDAC1-205ENST00000472928 CACNA1FO60840 1977 aa8.21□□□□□ -1.1
HDAC1-205ENST00000472928 TRIOBPQ9H2D6 2365 aa8.2□□□□□ -1.1
HDAC1-205ENST00000472928 TCERG1O14776 1098 aaKnown RBP8.2□□□□□ -1.1
HDAC1-205ENST00000472928 GTF2E1P29083 439 aaPredicted RBP8.2□□□□□ -1.1
HDAC1-205ENST00000472928 SLFN5Q08AF3 891 aa8.2□□□□□ -1.1
HDAC1-205ENST00000472928 DUSP27Q5VZP5 1158 aa8.2□□□□□ -1.1
HDAC1-205ENST00000472928 CDC37L1Q7L3B6 337 aa8.2□□□□□ -1.1
HDAC1-205ENST00000472928 RTFDC1Q9BY42 306 aaPredicted RBP8.2□□□□□ -1.1
HDAC1-205ENST00000472928 NYXQ9GZU5 481 aa8.2□□□□□ -1.1
HDAC1-205ENST00000472928 HTTP42858 3142 aa8.19□□□□□ -1.1
HDAC1-205ENST00000472928 ERVV-1B6SEH8 477 aa8.19□□□□□ -1.1
HDAC1-205ENST00000472928 RAD17O75943 681 aa8.19□□□□□ -1.1
HDAC1-205ENST00000472928 NEFLP07196 543 aa8.19□□□□□ -1.1
HDAC1-205ENST00000472928 HOXB3P14651 431 aaPredicted RBP8.19□□□□□ -1.1
HDAC1-205ENST00000472928 GPTP24298 496 aa8.19□□□□□ -1.1
HDAC1-205ENST00000472928 KIF23Q02241 960 aaPredicted RBP8.19□□□□□ -1.1
HDAC1-205ENST00000472928 SUSD4Q5VX71 490 aa8.19□□□□□ -1.1
HDAC1-205ENST00000472928 RGMBQ6NW40 437 aa8.19□□□□□ -1.1
HDAC1-205ENST00000472928 GIGYF2Q6Y7W6 1299 aaKnown RBP8.19□□□□□ -1.1
HDAC1-205ENST00000472928 TTLL7Q6ZT98 887 aa8.19□□□□□ -1.1
HDAC1-205ENST00000472928 MCM10Q7L590 875 aa8.19□□□□□ -1.1
HDAC1-205ENST00000472928 USP48Q86UV5 1035 aa8.19□□□□□ -1.1
HDAC1-205ENST00000472928 WDR63Q8IWG1 891 aa8.19□□□□□ -1.1
HDAC1-205ENST00000472928 RBM17Q96I25 401 aaKnown RBP8.19□□□□□ -1.1
HDAC1-205ENST00000472928 VPS33BQ9H267 617 aa8.19□□□□□ -1.1
HDAC1-205ENST00000472928 RNF186Q9NXI6 227 aa8.19□□□□□ -1.1
HDAC1-205ENST00000472928 ATP6V0A2Q9Y487 856 aa8.19□□□□□ -1.1
HDAC1-205ENST00000472928 IL16Q14005 1332 aa8.19□□□□□ -1.1
HDAC1-205ENST00000472928 NUP98P52948 1817 aa8.18□□□□□ -1.1
HDAC1-205ENST00000472928 TRPA1O75762 1119 aa8.18□□□□□ -1.1
HDAC1-205ENST00000472928 NTSR2O95665 410 aa8.18□□□□□ -1.1
HDAC1-205ENST00000472928 KIAA2012Q0VF49 1180 aa8.18□□□□□ -1.1
HDAC1-205ENST00000472928 DOK7Q18PE1 504 aa8.18□□□□□ -1.1
HDAC1-205ENST00000472928 CTU1Q7Z7A3 348 aaKnown RBP8.18□□□□□ -1.1
HDAC1-205ENST00000472928 THUMPD2Q9BTF0 503 aaKnown RBP8.18□□□□□ -1.1
HDAC1-205ENST00000472928 REPIN1Q9BWE0 567 aaKnown RBP8.18□□□□□ -1.1
HDAC1-205ENST00000472928 MYH16Q9H6N6 1097 aa8.18□□□□□ -1.1
HDAC1-205ENST00000472928 HPS5Q9UPZ3 1129 aa8.18□□□□□ -1.1
HDAC1-205ENST00000472928 SUPT16HQ9Y5B9 1047 aaKnown RBP8.18□□□□□ -1.1
HDAC1-205ENST00000472928 ABCC4O15439 1325 aa8.18□□□□□ -1.1
HDAC1-205ENST00000472928 MAP3K15Q6ZN16 1313 aa8.18□□□□□ -1.1
HDAC1-205ENST00000472928 FANCIQ9NVI1 1328 aa8.18□□□□□ -1.1
HDAC1-205ENST00000472928 YDJCA8MPS7 323 aa8.17□□□□□ -1.1
HDAC1-205ENST00000472928 POTEB2H3BUK9 544 aa8.17□□□□□ -1.1
HDAC1-205ENST00000472928 EGFRP00533 1210 aa8.17□□□□□ -1.1
HDAC1-205ENST00000472928 SLC10A3P09131 477 aa8.17□□□□□ -1.1
HDAC1-205ENST00000472928 NUDT7P0C024 238 aa8.17□□□□□ -1.1
HDAC1-205ENST00000472928 MS4A1P11836 297 aa8.17□□□□□ -1.1
HDAC1-205ENST00000472928 CALD1Q05682 793 aaKnown RBP8.17□□□□□ -1.1
HDAC1-205ENST00000472928 DCTN1Q14203 1278 aa8.17□□□□□ -1.1
HDAC1-205ENST00000472928 ZNF34Q8IZ26 560 aa8.17□□□□□ -1.1
HDAC1-205ENST00000472928 TRMT2AQ8IZ69 625 aaKnown RBP8.17□□□□□ -1.1
HDAC1-205ENST00000472928 ZNF454Q8N9F8 522 aa8.17□□□□□ -1.1
HDAC1-205ENST00000472928 TSR2Q969E8 191 aaKnown RBP8.17□□□□□ -1.1
HDAC1-205ENST00000472928 ZDHHC16Q969W1 377 aa8.17□□□□□ -1.1
HDAC1-205ENST00000472928 CSRNP1Q96S65 589 aa8.17□□□□□ -1.1
HDAC1-205ENST00000472928 PHOX2BQ99453 314 aa8.17□□□□□ -1.1
HDAC1-205ENST00000472928 TMUB1Q9BVT8 246 aa8.17□□□□□ -1.1
HDAC1-205ENST00000472928 BCL2L13Q9BXK5 485 aa8.17□□□□□ -1.1
HDAC1-205ENST00000472928 BCL11AQ9H165 835 aa8.17□□□□□ -1.1
HDAC1-205ENST00000472928 GBA2Q9HCG7 927 aaPredicted RBP8.17□□□□□ -1.1
HDAC1-205ENST00000472928 CNOT7Q9UIV1 285 aaKnown RBP8.17□□□□□ -1.1
HDAC1-205ENST00000472928 RCAN3Q9UKA8 241 aa8.17□□□□□ -1.1
HDAC1-205ENST00000472928 LAMB4A4D0S4 1761 aa8.17□□□□□ -1.1
HDAC1-205ENST00000472928 POLR2AP24928 1970 aaKnown RBP8.17□□□□□ -1.1
HDAC1-205ENST00000472928 ADM5C9JUS6 153 aa8.16□□□□□ -1.1
HDAC1-205ENST00000472928 CLCN1P35523 988 aa8.16□□□□□ -1.1
HDAC1-205ENST00000472928 TNIP1Q15025 636 aa8.16□□□□□ -1.1
HDAC1-205ENST00000472928 ARSIQ5FYB1 569 aa8.16□□□□□ -1.1
HDAC1-205ENST00000472928 C6orf132Q5T0Z8 1188 aa8.16□□□□□ -1.1
HDAC1-205ENST00000472928 SAMD7Q7Z3H4 446 aa8.16□□□□□ -1.1
HDAC1-205ENST00000472928 KRT26Q7Z3Y9 468 aa8.16□□□□□ -1.1
HDAC1-205ENST00000472928 SUPT20HQ8NEM7 779 aa8.16□□□□□ -1.1
HDAC1-205ENST00000472928 RTF1Q92541 710 aaKnown RBP8.16□□□□□ -1.1
HDAC1-205ENST00000472928 KHSRPQ92945 711 aaKnown RBP eCLIP8.16□□□□□ -1.1
HDAC1-205ENST00000472928 ZSWIM6Q9HCJ5 1215 aa8.16□□□□□ -1.1
HDAC1-205ENST00000472928 DUOX1Q9NRD9 1551 aa8.16□□□□□ -1.1
HDAC1-205ENST00000472928 LAS1LQ9Y4W2 734 aaKnown RBP8.16□□□□□ -1.1
HDAC1-205ENST00000472928 AKAP11Q9UKA4 1901 aa8.15□□□□□ -1.1
HDAC1-205ENST00000472928 H7C1D1 291 aa8.15□□□□□ -1.1
HDAC1-205ENST00000472928 ZNF157P51786 506 aaPredicted RBP8.15□□□□□ -1.1
HDAC1-205ENST00000472928 MDM2Q00987 491 aaPredicted RBP8.15□□□□□ -1.1
HDAC1-205ENST00000472928 SLC10A5Q5PT55 438 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms