RNA–Protein interactions for RNA: ENST00000472896.5

APTX-216, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,759 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-216ENST00000472896 GRM1Q13255 1194 aa12.07□□□□□ -0.48
APTX-216ENST00000472896 INTS3Q68E01 1043 aaKnown RBP12.07□□□□□ -0.48
APTX-216ENST00000472896 GPC2Q8N158 579 aa12.07□□□□□ -0.48
APTX-216ENST00000472896 GPR101Q96P66 508 aaPredicted RBP12.07□□□□□ -0.48
APTX-216ENST00000472896 DNAJC2Q99543 621 aaKnown RBP12.07□□□□□ -0.48
APTX-216ENST00000472896 TSPYL1Q9H0U9 437 aa12.07□□□□□ -0.48
APTX-216ENST00000472896 FAM177BA6PVY3 158 aa12.06□□□□□ -0.48
APTX-216ENST00000472896 GNAT3A8MTJ3 354 aa12.06□□□□□ -0.48
APTX-216ENST00000472896 TRAF5O00463 557 aa12.06□□□□□ -0.48
APTX-216ENST00000472896 AOC2O75106 756 aa12.06□□□□□ -0.48
APTX-216ENST00000472896 CASC1Q6TDU7 716 aa12.06□□□□□ -0.48
APTX-216ENST00000472896 SLC51AQ86UW1 340 aa12.06□□□□□ -0.48
APTX-216ENST00000472896 RNF214Q8ND24 703 aa12.06□□□□□ -0.48
APTX-216ENST00000472896 CGNQ9P2M7 1197 aaKnown RBP12.06□□□□□ -0.48
APTX-216ENST00000472896 GJA3Q9Y6H8 435 aa12.06□□□□□ -0.48
APTX-216ENST00000472896 SPDYE4A6NLX3 237 aa12.05□□□□□ -0.48
APTX-216ENST00000472896 CLEC4GQ6UXB4 293 aa12.05□□□□□ -0.48
APTX-216ENST00000472896 PAXIP1Q6ZW49 1069 aaPredicted RBP12.05□□□□□ -0.48
APTX-216ENST00000472896 ARHGAP45Q92619 1136 aa12.05□□□□□ -0.48
APTX-216ENST00000472896 PCDH10Q9P2E7 1040 aa12.05□□□□□ -0.48
APTX-216ENST00000472896 COL4A5P29400 1685 aa12.05□□□□□ -0.48
APTX-216ENST00000472896 LTBP1Q14766 1721 aa12.05□□□□□ -0.48
APTX-216ENST00000472896 GOLGA6L6A8MZA4 724 aa12.05□□□□□ -0.48
APTX-216ENST00000472896 NBPF26B4DH59 902 aa12.05□□□□□ -0.48
APTX-216ENST00000472896 BRD1O95696 1058 aa12.05□□□□□ -0.48
APTX-216ENST00000472896 U2AF2P26368 475 aaKnown RBP eCLIP12.05□□□□□ -0.489e-15■■■■■ 42.9
APTX-216ENST00000472896 NBPF10Q6P3W6 841 aaKnown RBP12.05□□□□□ -0.48
APTX-216ENST00000472896 TPTE2Q6XPS3 522 aa12.05□□□□□ -0.48
APTX-216ENST00000472896 NBPF15Q8N660 670 aa12.05□□□□□ -0.48
APTX-216ENST00000472896 KIAA1524Q8TCG1 905 aa12.05□□□□□ -0.48
APTX-216ENST00000472896 RIOK3O14730 519 aaKnown RBP12.04□□□□□ -0.48
APTX-216ENST00000472896 SCNN1DP51172 638 aa12.04□□□□□ -0.48
APTX-216ENST00000472896 PKP1Q13835 747 aa12.04□□□□□ -0.48
APTX-216ENST00000472896 HLFQ16534 295 aa12.04□□□□□ -0.48
APTX-216ENST00000472896 TSC1Q92574 1164 aa12.04□□□□□ -0.48
APTX-216ENST00000472896 NIP7Q9Y221 180 aaKnown RBP eCLIP12.04□□□□□ -0.48
APTX-216ENST00000472896 MORC2Q9Y6X9 1032 aaPredicted RBP12.04□□□□□ -0.48
APTX-216ENST00000472896 SNED1Q8TER0 1413 aa12.04□□□□□ -0.48
APTX-216ENST00000472896 SIPA1L3O60292 1781 aaPredicted RBP12.04□□□□□ -0.48
APTX-216ENST00000472896 BCORQ6W2J9 1755 aa12.04□□□□□ -0.48
APTX-216ENST00000472896 AK9Q5TCS8 1911 aa12.03□□□□□ -0.48
APTX-216ENST00000472896 BTBD11A6QL63 1104 aa12.03□□□□□ -0.48
APTX-216ENST00000472896 ADCY5O95622 1261 aa12.03□□□□□ -0.48
APTX-216ENST00000472896 ECE1P42892 770 aa12.03□□□□□ -0.48
APTX-216ENST00000472896 PHACTR3Q96KR7 559 aa12.03□□□□□ -0.48
APTX-216ENST00000472896 TIGD1Q96MW7 591 aa12.03□□□□□ -0.48
APTX-216ENST00000472896 PSMD1Q99460 953 aa12.03□□□□□ -0.48
APTX-216ENST00000472896 BEGAINQ9BUH8 593 aa12.03□□□□□ -0.48
APTX-216ENST00000472896 MCOLN1Q9GZU1 580 aa12.03□□□□□ -0.48
APTX-216ENST00000472896 CALCOCO1Q9P1Z2 691 aa12.03□□□□□ -0.48
APTX-216ENST00000472896 USP25Q9UHP3 1055 aa12.03□□□□□ -0.48
APTX-216ENST00000472896 DDX41Q9UJV9 622 aaKnown RBP12.03□□□□□ -0.48
APTX-216ENST00000472896 NSFL1CQ9UNZ2 370 aaKnown RBP12.03□□□□□ -0.48
APTX-216ENST00000472896 TLL2Q9Y6L7 1015 aa12.03□□□□□ -0.48
APTX-216ENST00000472896 ZBTB7BO15156 539 aaPredicted RBP12.02□□□□□ -0.48
APTX-216ENST00000472896 REC8O95072 547 aa12.02□□□□□ -0.48
APTX-216ENST00000472896 SLFN14P0C7P3 912 aa12.02□□□□□ -0.48
APTX-216ENST00000472896 ALDH1B1P30837 517 aa12.02□□□□□ -0.48
APTX-216ENST00000472896 CCDC183Q5T5S1 534 aa12.02□□□□□ -0.48
APTX-216ENST00000472896 TTC22Q5TAA0 569 aa12.02□□□□□ -0.48
APTX-216ENST00000472896 JDP2Q8WYK2 163 aa12.02□□□□□ -0.48
APTX-216ENST00000472896 JARID2Q92833 1246 aaPredicted RBP12.02□□□□□ -0.48
APTX-216ENST00000472896 INTS4Q96HW7 963 aaKnown RBP12.02□□□□□ -0.48
APTX-216ENST00000472896 CTNNA3Q9UI47 895 aa12.02□□□□□ -0.48
APTX-216ENST00000472896 CEMIPQ8WUJ3 1361 aa12.02□□□□□ -0.48
APTX-216ENST00000472896 KDM4AO75164 1064 aa12.02□□□□□ -0.49
APTX-216ENST00000472896 EIF6P56537 245 aaKnown RBP12.02□□□□□ -0.49
APTX-216ENST00000472896 ZGPATQ8N5A5 531 aaKnown RBP12.02□□□□□ -0.49
APTX-216ENST00000472896 TMEM87AQ8NBN3 555 aa12.02□□□□□ -0.49
APTX-216ENST00000472896 TSR2Q969E8 191 aaKnown RBP12.02□□□□□ -0.49
APTX-216ENST00000472896 TTC12Q9H892 705 aaPredicted RBP12.02□□□□□ -0.49
APTX-216ENST00000472896 THSD7BQ9C0I4 1608 aa12.02□□□□□ -0.49
APTX-216ENST00000472896 CASP8AP2Q9UKL3 1982 aa12.02□□□□□ -0.49
APTX-216ENST00000472896 SMTNL1A8MU46 457 aa12.01□□□□□ -0.49
APTX-216ENST00000472896 U2SURPO15042 1029 aaKnown RBP12.01□□□□□ -0.49
APTX-216ENST00000472896 LMOD1P29536 600 aaPredicted RBP12.01□□□□□ -0.49
APTX-216ENST00000472896 MAP2K2P36507 400 aa12.01□□□□□ -0.49
APTX-216ENST00000472896 CUL4AQ13619 759 aa12.01□□□□□ -0.49
APTX-216ENST00000472896 ZNF652Q9Y2D9 606 aa12.01□□□□□ -0.49
APTX-216ENST00000472896 U2AF1L5P0DN76 240 aaPredicted RBP12□□□□□ -0.49
APTX-216ENST00000472896 GSPT1P15170 499 aaKnown RBP12□□□□□ -0.49
APTX-216ENST00000472896 TMPOP42166 694 aaKnown RBP12□□□□□ -0.49
APTX-216ENST00000472896 IRX5P78411 483 aaPredicted RBP12□□□□□ -0.49
APTX-216ENST00000472896 U2AF1Q01081 240 aaKnown RBP eCLIP12□□□□□ -0.492e-8■■■■■ 37
APTX-216ENST00000472896 CRY2Q49AN0 593 aa12□□□□□ -0.49
APTX-216ENST00000472896 USP50Q70EL3 339 aaPredicted RBP12□□□□□ -0.49
APTX-216ENST00000472896 NUTM1Q86Y26 1132 aa12□□□□□ -0.49
APTX-216ENST00000472896 PLEKHM2Q8IWE5 1019 aa12□□□□□ -0.49
APTX-216ENST00000472896 ZNF830Q96NB3 372 aaPredicted RBP12□□□□□ -0.49
APTX-216ENST00000472896 TRPM7Q96QT4 1865 aa12□□□□□ -0.49
APTX-216ENST00000472896 SNRPA1P09661 255 aaKnown RBP12□□□□□ -0.49
APTX-216ENST00000472896 ZIC5Q96T25 663 aa12□□□□□ -0.49
APTX-216ENST00000472896 PAXBP1Q9Y5B6 917 aa12□□□□□ -0.49
APTX-216ENST00000472896 COL3A1P02461 1466 aaPredicted RBP11.99□□□□□ -0.49
APTX-216ENST00000472896 ABCC12Q96J65 1359 aa11.99□□□□□ -0.49
APTX-216ENST00000472896 KCNJ4P48050 445 aa11.99□□□□□ -0.49
APTX-216ENST00000472896 NCBP1Q09161 790 aaKnown RBP11.99□□□□□ -0.49
APTX-216ENST00000472896 TERF2Q15554 542 aa11.99□□□□□ -0.49
APTX-216ENST00000472896 SAPCD2Q86UD0 394 aa11.99□□□□□ -0.49
APTX-216ENST00000472896 KRT222Q8N1A0 295 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms