RNA–Protein interactions for RNA: ENST00000472815.5

HIF3A-206, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-206ENST00000472815 PARP3Q9Y6F1 533 aa17.61■□□□□ 0.41
HIF3A-206ENST00000472815 MYH7P12883 1935 aa17.6■□□□□ 0.41
HIF3A-206ENST00000472815 KCNJ4P48050 445 aa17.6■□□□□ 0.41
HIF3A-206ENST00000472815 R3HDM1Q15032 1099 aaKnown RBP17.6■□□□□ 0.41
HIF3A-206ENST00000472815 CCDC24Q8N4L8 307 aa17.6■□□□□ 0.41
HIF3A-206ENST00000472815 EDC3Q96F86 508 aaKnown RBP17.6■□□□□ 0.41
HIF3A-206ENST00000472815 NRXN2Q9P2S2 1712 aa17.6■□□□□ 0.41
HIF3A-206ENST00000472815 AKAP11Q9UKA4 1901 aa17.59■□□□□ 0.41
HIF3A-206ENST00000472815 ST18O60284 1047 aa17.59■□□□□ 0.41
HIF3A-206ENST00000472815 DDR1Q08345 913 aa17.59■□□□□ 0.41
HIF3A-206ENST00000472815 CRY2Q49AN0 593 aa17.59■□□□□ 0.41
HIF3A-206ENST00000472815 CAVIN4Q5BKX8 364 aa17.59■□□□□ 0.41
HIF3A-206ENST00000472815 LSG1Q9H089 658 aaKnown RBP17.59■□□□□ 0.41
HIF3A-206ENST00000472815 HELLSQ9NRZ9 838 aa17.59■□□□□ 0.41
HIF3A-206ENST00000472815 MCMDC2Q4G0Z9 681 aa17.58■□□□□ 0.41
HIF3A-206ENST00000472815 SLC16A10Q8TF71 515 aa17.58■□□□□ 0.41
HIF3A-206ENST00000472815 FAM227BQ96M60 508 aa17.58■□□□□ 0.41
HIF3A-206ENST00000472815 KIF2CQ99661 725 aa17.58■□□□□ 0.41
HIF3A-206ENST00000472815 NDUFB9Q9Y6M9 179 aa17.58■□□□□ 0.41
HIF3A-206ENST00000472815 CCDC171Q6TFL3 1326 aa17.58■□□□□ 0.41
HIF3A-206ENST00000472815 MED23Q9ULK4 1368 aa17.58■□□□□ 0.4
HIF3A-206ENST00000472815 A0A0D9SFI3 127 aa17.58■□□□□ 0.4
HIF3A-206ENST00000472815 RNF113AO15541 343 aaKnown RBP17.58■□□□□ 0.4
HIF3A-206ENST00000472815 HSPA4P34932 840 aa17.58■□□□□ 0.4
HIF3A-206ENST00000472815 MCAMP43121 646 aa17.58■□□□□ 0.4
HIF3A-206ENST00000472815 PHKA1P46020 1223 aa17.58■□□□□ 0.4
HIF3A-206ENST00000472815 TMC4Q7Z404 712 aa17.58■□□□□ 0.4
HIF3A-206ENST00000472815 VPS37DQ86XT2 251 aa17.58■□□□□ 0.4
HIF3A-206ENST00000472815 ZAP70P43403 619 aa17.57■□□□□ 0.4
HIF3A-206ENST00000472815 RNF20Q5VTR2 975 aa17.57■□□□□ 0.4
HIF3A-206ENST00000472815 BRIP1Q9BX63 1249 aa17.57■□□□□ 0.4
HIF3A-206ENST00000472815 TBC1D2Q9BYX2 928 aa17.57■□□□□ 0.4
HIF3A-206ENST00000472815 IL25Q9H293 177 aa17.57■□□□□ 0.4
HIF3A-206ENST00000472815 KLRG2A4D1S0 409 aaPredicted RBP17.55■□□□□ 0.4
HIF3A-206ENST00000472815 BBOX1O75936 387 aa17.55■□□□□ 0.4
HIF3A-206ENST00000472815 ZKSCAN1P17029 563 aaPredicted RBP17.55■□□□□ 0.4
HIF3A-206ENST00000472815 HOXA10P31260 410 aaPredicted RBP17.55■□□□□ 0.4
HIF3A-206ENST00000472815 PDE6BP35913 854 aa17.55■□□□□ 0.4
HIF3A-206ENST00000472815 SPATA5Q8NB90 893 aa17.55■□□□□ 0.4
HIF3A-206ENST00000472815 IL17RAQ96F46 866 aa17.55■□□□□ 0.4
HIF3A-206ENST00000472815 CRAMP1Q96RY5 1269 aa17.55■□□□□ 0.4
HIF3A-206ENST00000472815 COL4A1P02462 1669 aa17.55■□□□□ 0.4
HIF3A-206ENST00000472815 PSDA5PKW4 1024 aaPredicted RBP17.55■□□□□ 0.4
HIF3A-206ENST00000472815 MMP10P09238 476 aa17.55■□□□□ 0.4
HIF3A-206ENST00000472815 SCARF1Q14162 830 aa17.55■□□□□ 0.4
HIF3A-206ENST00000472815 ZMYM1Q5SVZ6 1142 aa17.55■□□□□ 0.4
HIF3A-206ENST00000472815 MAP4K1Q92918 833 aa17.55■□□□□ 0.4
HIF3A-206ENST00000472815 LEMD3Q9Y2U8 911 aa17.55■□□□□ 0.4
HIF3A-206ENST00000472815 SEMA3EO15041 775 aa17.54■□□□□ 0.4
HIF3A-206ENST00000472815 PDGFDQ9GZP0 370 aaPredicted RBP17.54■□□□□ 0.4
HIF3A-206ENST00000472815 ANTXR1Q9H6X2 564 aa17.54■□□□□ 0.4
HIF3A-206ENST00000472815 ANKIB1Q9P2G1 1089 aa17.54■□□□□ 0.4
HIF3A-206ENST00000472815 XDHP47989 1333 aa17.54■□□□□ 0.4
HIF3A-206ENST00000472815 MCM2P49736 904 aa17.53■□□□□ 0.4
HIF3A-206ENST00000472815 HMG20BQ9P0W2 317 aa17.53■□□□□ 0.4
HIF3A-206ENST00000472815 ZNF804BA4D1E1 1349 aa17.53■□□□□ 0.4
HIF3A-206ENST00000472815 MYH13Q9UKX3 1938 aa17.53■□□□□ 0.4
HIF3A-206ENST00000472815 ANKRD31Q8N7Z5 1873 aa17.53■□□□□ 0.4
HIF3A-206ENST00000472815 DOCK2Q92608 1830 aa17.53■□□□□ 0.4
HIF3A-206ENST00000472815 CYP2E1P05181 493 aaPredicted RBP17.52■□□□□ 0.4
HIF3A-206ENST00000472815 BCAMP50895 628 aa17.52■□□□□ 0.4
HIF3A-206ENST00000472815 MAP3K12Q12852 859 aa17.52■□□□□ 0.4
HIF3A-206ENST00000472815 RASGRF1Q13972 1273 aa17.52■□□□□ 0.4
HIF3A-206ENST00000472815 WASHC4Q2M389 1173 aa17.52■□□□□ 0.4
HIF3A-206ENST00000472815 APPBP2Q92624 585 aa17.52■□□□□ 0.4
HIF3A-206ENST00000472815 DENND2AQ9ULE3 1009 aa17.52■□□□□ 0.4
HIF3A-206ENST00000472815 U3KPZ7 1027 aaPredicted RBP17.52■□□□□ 0.4
HIF3A-206ENST00000472815 K7ELQ4 463 aaPredicted RBP17.52■□□□□ 0.39
HIF3A-206ENST00000472815 ALDH1B1P30837 517 aa17.52■□□□□ 0.39
HIF3A-206ENST00000472815 SLC4A3P48751 1232 aa17.52■□□□□ 0.39
HIF3A-206ENST00000472815 PTH1RQ03431 593 aa17.52■□□□□ 0.39
HIF3A-206ENST00000472815 TMX4Q9H1E5 349 aaPredicted RBP17.52■□□□□ 0.39
HIF3A-206ENST00000472815 RBM8AQ9Y5S9 174 aaKnown RBP17.52■□□□□ 0.39
HIF3A-206ENST00000472815 SNAP23O00161 211 aa17.51■□□□□ 0.39
HIF3A-206ENST00000472815 IDH1O75874 414 aaKnown RBP17.51■□□□□ 0.39
HIF3A-206ENST00000472815 NPR1P16066 1061 aa17.51■□□□□ 0.39
HIF3A-206ENST00000472815 PI16Q6UXB8 463 aa17.51■□□□□ 0.39
HIF3A-206ENST00000472815 ZNF589Q86UQ0 364 aaPredicted RBP17.51■□□□□ 0.39
HIF3A-206ENST00000472815 DSCC1Q9BVC3 393 aa17.51■□□□□ 0.39
HIF3A-206ENST00000472815 MTFR1LQ9H019 292 aa17.51■□□□□ 0.39
HIF3A-206ENST00000472815 PDS5AQ29RF7 1337 aaKnown RBP17.5■□□□□ 0.39
HIF3A-206ENST00000472815 ZBTB22O15209 634 aa17.5■□□□□ 0.39
HIF3A-206ENST00000472815 FRAT2O75474 233 aaPredicted RBP17.5■□□□□ 0.39
HIF3A-206ENST00000472815 NECTIN1Q15223 517 aa17.5■□□□□ 0.39
HIF3A-206ENST00000472815 UBE3CQ15386 1083 aa17.5■□□□□ 0.39
HIF3A-206ENST00000472815 SLC9C2Q5TAH2 1124 aa17.5■□□□□ 0.39
HIF3A-206ENST00000472815 HSP90AA1P07900 732 aaKnown RBP17.5■□□□□ 0.39
HIF3A-206ENST00000472815 ATP2B4P23634 1241 aa17.5■□□□□ 0.39
HIF3A-206ENST00000472815 PSMA5P28066 241 aa17.5■□□□□ 0.39
HIF3A-206ENST00000472815 HIBADHP31937 336 aaKnown RBP17.5■□□□□ 0.39
HIF3A-206ENST00000472815 ADD2P35612 726 aa17.5■□□□□ 0.39
HIF3A-206ENST00000472815 GYG1P46976 350 aa17.5■□□□□ 0.39
HIF3A-206ENST00000472815 NEK4P51957 841 aa17.5■□□□□ 0.39
HIF3A-206ENST00000472815 KRT32Q14532 448 aa17.5■□□□□ 0.39
HIF3A-206ENST00000472815 MSL1Q68DK7 614 aa17.5■□□□□ 0.39
HIF3A-206ENST00000472815 PRPF40BQ6NWY9 871 aaKnown RBP17.5■□□□□ 0.39
HIF3A-206ENST00000472815 KCNB2Q92953 911 aa17.5■□□□□ 0.39
HIF3A-206ENST00000472815 PALD1Q9ULE6 856 aa17.5■□□□□ 0.39
HIF3A-206ENST00000472815 SNX14Q9Y5W7 946 aa17.5■□□□□ 0.39
HIF3A-206ENST00000472815 MAST3O60307 1309 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms