RNA–Protein interactions for RNA: ENST00000472806.1

CCDC171-205, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-205ENST00000472806 PAPPAQ13219 1627 aa9.18□□□□□ -0.94
CCDC171-205ENST00000472806 PUS10Q3MIT2 529 aaKnown RBP9.18□□□□□ -0.94
CCDC171-205ENST00000472806 RNF20Q5VTR2 975 aa9.18□□□□□ -0.94
CCDC171-205ENST00000472806 LRP10Q7Z4F1 713 aa9.18□□□□□ -0.94
CCDC171-205ENST00000472806 UNC5CLQ8IV45 518 aa9.18□□□□□ -0.94
CCDC171-205ENST00000472806 TMX3Q96JJ7 454 aa9.18□□□□□ -0.94
CCDC171-205ENST00000472806 TM6SF1Q9BZW5 370 aa9.18□□□□□ -0.94
CCDC171-205ENST00000472806 CWC25Q9NXE8 425 aaPredicted RBP9.18□□□□□ -0.94
CCDC171-205ENST00000472806 UBR2Q8IWV8 1755 aa9.17□□□□□ -0.94
CCDC171-205ENST00000472806 ARFGEF2Q9Y6D5 1785 aa9.17□□□□□ -0.94
CCDC171-205ENST00000472806 ZNF335Q9H4Z2 1342 aaPredicted RBP9.17□□□□□ -0.94
CCDC171-205ENST00000472806 A0A087WZG4 1122 aa9.17□□□□□ -0.94
CCDC171-205ENST00000472806 PSMA5P28066 241 aa9.17□□□□□ -0.94
CCDC171-205ENST00000472806 KLHL40Q2TBA0 621 aa9.17□□□□□ -0.94
CCDC171-205ENST00000472806 SPRYD7Q5W111 196 aa9.17□□□□□ -0.94
CCDC171-205ENST00000472806 CWC27Q6UX04 472 aaKnown RBP9.17□□□□□ -0.94
CCDC171-205ENST00000472806 VSIG10Q8N0Z9 540 aa9.17□□□□□ -0.94
CCDC171-205ENST00000472806 CCDC191Q8NCU4 936 aa9.17□□□□□ -0.94
CCDC171-205ENST00000472806 PXYLP1Q8TE99 480 aa9.17□□□□□ -0.94
CCDC171-205ENST00000472806 KAZALD1Q96I82 304 aa9.17□□□□□ -0.94
CCDC171-205ENST00000472806 ZSCAN31Q96LW9 406 aaPredicted RBP9.17□□□□□ -0.94
CCDC171-205ENST00000472806 LSG1Q9H089 658 aaKnown RBP9.17□□□□□ -0.94
CCDC171-205ENST00000472806 TMOD3Q9NYL9 352 aa9.17□□□□□ -0.94
CCDC171-205ENST00000472806 PA2G4Q9UQ80 394 aaKnown RBP9.17□□□□□ -0.94
CCDC171-205ENST00000472806 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.17□□□□□ -0.94
CCDC171-205ENST00000472806 AFDNP55196 1824 aaKnown RBP9.17□□□□□ -0.94
CCDC171-205ENST00000472806 TNS2Q63HR2 1409 aa9.16□□□□□ -0.94
CCDC171-205ENST00000472806 FSD2A1L4K1 749 aa9.16□□□□□ -0.94
CCDC171-205ENST00000472806 POTECB2RU33 542 aa9.16□□□□□ -0.94
CCDC171-205ENST00000472806 H7C1W4 665 aa9.16□□□□□ -0.94
CCDC171-205ENST00000472806 SASH1O94885 1247 aa9.16□□□□□ -0.94
CCDC171-205ENST00000472806 MAP4K4O95819 1239 aaPredicted RBP9.16□□□□□ -0.94
CCDC171-205ENST00000472806 ZNF787Q6DD87 383 aa9.16□□□□□ -0.94
CCDC171-205ENST00000472806 FSD1Q9BTV5 496 aa9.16□□□□□ -0.94
CCDC171-205ENST00000472806 PRR14Q9BWN1 585 aa9.16□□□□□ -0.94
CCDC171-205ENST00000472806 GPR108Q9NPR9 543 aa9.16□□□□□ -0.94
CCDC171-205ENST00000472806 SNRKQ9NRH2 765 aa9.16□□□□□ -0.94
CCDC171-205ENST00000472806 ATG3Q9NT62 314 aa9.16□□□□□ -0.94
CCDC171-205ENST00000472806 KCPQ6ZWJ8 1503 aa9.15□□□□□ -0.94
CCDC171-205ENST00000472806 WDR33Q9C0J8 1336 aaKnown RBP9.15□□□□□ -0.94
CCDC171-205ENST00000472806 STARD3NLO95772 234 aa9.15□□□□□ -0.94
CCDC171-205ENST00000472806 MBD3O95983 291 aa9.15□□□□□ -0.94
CCDC171-205ENST00000472806 ATP5JP18859 108 aa9.15□□□□□ -0.94
CCDC171-205ENST00000472806 KCNJ4P48050 445 aa9.15□□□□□ -0.94
CCDC171-205ENST00000472806 ANKRD1Q15327 319 aa9.15□□□□□ -0.94
CCDC171-205ENST00000472806 LRRFIP1Q32MZ4 808 aaKnown RBP9.15□□□□□ -0.94
CCDC171-205ENST00000472806 KIF6Q6ZMV9 814 aa9.15□□□□□ -0.94
CCDC171-205ENST00000472806 UBE3BQ7Z3V4 1068 aa9.15□□□□□ -0.94
CCDC171-205ENST00000472806 DDX54Q8TDD1 881 aaKnown RBP9.15□□□□□ -0.94
CCDC171-205ENST00000472806 KCNB2Q92953 911 aa9.15□□□□□ -0.94
CCDC171-205ENST00000472806 EAF2Q96CJ1 260 aaPredicted RBP9.15□□□□□ -0.94
CCDC171-205ENST00000472806 SH2B1Q9NRF2 756 aaPredicted RBP9.15□□□□□ -0.94
CCDC171-205ENST00000472806 STRN4Q9NRL3 753 aa9.15□□□□□ -0.94
CCDC171-205ENST00000472806 HMG20BQ9P0W2 317 aa9.15□□□□□ -0.94
CCDC171-205ENST00000472806 PALD1Q9ULE6 856 aa9.15□□□□□ -0.94
CCDC171-205ENST00000472806 LIMCH1Q9UPQ0 1083 aa9.15□□□□□ -0.94
CCDC171-205ENST00000472806 ATP6V1DQ9Y5K8 247 aa9.15□□□□□ -0.94
CCDC171-205ENST00000472806 SNX14Q9Y5W7 946 aa9.15□□□□□ -0.94
CCDC171-205ENST00000472806 DDX49Q9Y6V7 483 aaKnown RBP9.15□□□□□ -0.94
CCDC171-205ENST00000472806 GLI3P10071 1580 aa9.15□□□□□ -0.95
CCDC171-205ENST00000472806 COL14A1Q05707 1796 aaKnown RBP9.14□□□□□ -0.95
CCDC171-205ENST00000472806 CCDC171Q6TFL3 1326 aa9.14□□□□□ -0.95
CCDC171-205ENST00000472806 CIAO1O76071 339 aa9.14□□□□□ -0.95
CCDC171-205ENST00000472806 NCLP19338 710 aaKnown RBP9.14□□□□□ -0.95
CCDC171-205ENST00000472806 IL15P40933 162 aaPredicted RBP9.14□□□□□ -0.95
CCDC171-205ENST00000472806 RFX5P48382 616 aaPredicted RBP9.14□□□□□ -0.95
CCDC171-205ENST00000472806 PTPN12Q05209 780 aaKnown RBP9.14□□□□□ -0.95
CCDC171-205ENST00000472806 KRT32Q14532 448 aa9.14□□□□□ -0.95
CCDC171-205ENST00000472806 KMT5BQ4FZB7 885 aa9.14□□□□□ -0.95
CCDC171-205ENST00000472806 HSP90AB3PQ58FF7 597 aa9.14□□□□□ -0.95
CCDC171-205ENST00000472806 TNNI3KQ59H18 835 aa9.14□□□□□ -0.95
CCDC171-205ENST00000472806 VPS53Q5VIR6 699 aa9.14□□□□□ -0.95
CCDC171-205ENST00000472806 MCTP1Q6DN14 999 aa9.14□□□□□ -0.95
CCDC171-205ENST00000472806 SCUBE3Q8IX30 993 aa9.14□□□□□ -0.95
CCDC171-205ENST00000472806 ANKLE1Q8NAG6 615 aa9.14□□□□□ -0.95
CCDC171-205ENST00000472806 ANP32BQ92688 251 aaKnown RBP9.14□□□□□ -0.95
CCDC171-205ENST00000472806 CDCA7Q9BWT1 371 aaPredicted RBP9.14□□□□□ -0.95
CCDC171-205ENST00000472806 CCDC8Q9H0W5 538 aaPredicted RBP9.14□□□□□ -0.95
CCDC171-205ENST00000472806 GZF1Q9H116 711 aaPredicted RBP9.14□□□□□ -0.95
CCDC171-205ENST00000472806 SIL1Q9H173 461 aa9.14□□□□□ -0.95
CCDC171-205ENST00000472806 CYP46A1Q9Y6A2 500 aa9.14□□□□□ -0.95
CCDC171-205ENST00000472806 FPGT-TNNI3KV9GXZ4 949 aa9.14□□□□□ -0.95
CCDC171-205ENST00000472806 LRP6O75581 1613 aa9.13□□□□□ -0.95
CCDC171-205ENST00000472806 TNFRSF10AO00220 468 aa9.13□□□□□ -0.95
CCDC171-205ENST00000472806 BRD1O95696 1058 aa9.13□□□□□ -0.95
CCDC171-205ENST00000472806 CASP7P55210 303 aa9.13□□□□□ -0.95
CCDC171-205ENST00000472806 TRIM28Q13263 835 aaKnown RBP9.13□□□□□ -0.95
CCDC171-205ENST00000472806 CSPP1Q1MSJ5 1256 aa9.13□□□□□ -0.95
CCDC171-205ENST00000472806 METTL3Q86U44 580 aaKnown RBP9.13□□□□□ -0.95
CCDC171-205ENST00000472806 ZGPATQ8N5A5 531 aaKnown RBP9.13□□□□□ -0.95
CCDC171-205ENST00000472806 SYAP1Q96A49 352 aaPredicted RBP9.13□□□□□ -0.95
CCDC171-205ENST00000472806 BOLA2Q9H3K6 86 aa9.13□□□□□ -0.95
CCDC171-205ENST00000472806 PDRG1Q9NUG6 133 aa9.13□□□□□ -0.95
CCDC171-205ENST00000472806 NUP188Q5SRE5 1749 aa9.13□□□□□ -0.95
CCDC171-205ENST00000472806 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.12□□□□□ -0.95
CCDC171-205ENST00000472806 ATP5J2-PTCD1G3V325 749 aa9.12□□□□□ -0.95
CCDC171-205ENST00000472806 PTCD1O75127 700 aaKnown RBP9.12□□□□□ -0.95
CCDC171-205ENST00000472806 ADH1BP00325 375 aa9.12□□□□□ -0.95
CCDC171-205ENST00000472806 CASTP20810 708 aaKnown RBP9.12□□□□□ -0.95
CCDC171-205ENST00000472806 TFCP2Q12800 502 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms