RNA–Protein interactions for RNA: ENST00000472659.1

PKD1-209, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 3

Gene PKD1, Length 661 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-209ENST00000472659 ARHGAP45Q92619 1136 aa23.42■■□□□ 1.34
PKD1-209ENST00000472659 TAF5LO75529 589 aa23.41■■□□□ 1.34
PKD1-209ENST00000472659 EGFRP00533 1210 aa23.41■■□□□ 1.34
PKD1-209ENST00000472659 RSBN1LQ6PCB5 846 aaPredicted RBP23.41■■□□□ 1.34
PKD1-209ENST00000472659 HELBQ8NG08 1087 aaPredicted RBP23.41■■□□□ 1.34
PKD1-209ENST00000472659 ZC3H15Q8WU90 426 aaKnown RBP23.41■■□□□ 1.34
PKD1-209ENST00000472659 GMLQ99445 158 aa23.41■■□□□ 1.34
PKD1-209ENST00000472659 USP17L3A6NCW0 530 aa23.4■■□□□ 1.34
PKD1-209ENST00000472659 USP17L4A6NCW7 530 aa23.4■■□□□ 1.34
PKD1-209ENST00000472659 USP17L1Q7RTZ2 530 aa23.4■■□□□ 1.34
PKD1-209ENST00000472659 AGBL3Q8NEM8 1001 aa23.4■■□□□ 1.34
PKD1-209ENST00000472659 CNNM1Q9NRU3 951 aa23.4■■□□□ 1.34
PKD1-209ENST00000472659 CNTNAP1P78357 1384 aa23.4■■□□□ 1.34
PKD1-209ENST00000472659 TMEM88BA6NKF7 163 aa23.39■■□□□ 1.33
PKD1-209ENST00000472659 KCNJ4P48050 445 aa23.39■■□□□ 1.33
PKD1-209ENST00000472659 DACT2Q5SW24 774 aa23.39■■□□□ 1.33
PKD1-209ENST00000472659 SAMD7Q7Z3H4 446 aa23.39■■□□□ 1.33
PKD1-209ENST00000472659 PUS3Q9BZE2 481 aaKnown RBP23.39■■□□□ 1.33
PKD1-209ENST00000472659 BCAR3O75815 825 aa23.38■■□□□ 1.33
PKD1-209ENST00000472659 ZNF280AP59817 542 aaPredicted RBP23.38■■□□□ 1.33
PKD1-209ENST00000472659 RIPOR2Q9Y4F9 1068 aa23.38■■□□□ 1.33
PKD1-209ENST00000472659 TRAF5O00463 557 aa23.37■■□□□ 1.33
PKD1-209ENST00000472659 FMR1Q06787 632 aaKnown RBP eCLIP23.37■■□□□ 1.33
PKD1-209ENST00000472659 TBC1D10BQ4KMP7 808 aaPredicted RBP23.37■■□□□ 1.33
PKD1-209ENST00000472659 COL13A1Q5TAT6 717 aaPredicted RBP23.37■■□□□ 1.33
PKD1-209ENST00000472659 TRPM7Q96QT4 1865 aa23.36■■□□□ 1.33
PKD1-209ENST00000472659 HSPA1AP0DMV8 641 aaKnown RBP23.36■■□□□ 1.33
PKD1-209ENST00000472659 HSPA1BP0DMV9 641 aaKnown RBP23.36■■□□□ 1.33
PKD1-209ENST00000472659 TRIM27P14373 513 aa23.36■■□□□ 1.33
PKD1-209ENST00000472659 STRIP1Q5VSL9 837 aa23.36■■□□□ 1.33
PKD1-209ENST00000472659 INTS3Q68E01 1043 aaKnown RBP23.36■■□□□ 1.33
PKD1-209ENST00000472659 UBTFL1P0CB47 393 aaPredicted RBP23.35■■□□□ 1.33
PKD1-209ENST00000472659 KIF4BQ2VIQ3 1234 aa23.35■■□□□ 1.33
PKD1-209ENST00000472659 CD209Q9NNX6 404 aa23.35■■□□□ 1.33
PKD1-209ENST00000472659 RFX5P48382 616 aaPredicted RBP23.34■■□□□ 1.33
PKD1-209ENST00000472659 LRRC24Q50LG9 513 aa23.34■■□□□ 1.33
PKD1-209ENST00000472659 MXD3Q9BW11 206 aa23.34■■□□□ 1.33
PKD1-209ENST00000472659 GLIS2Q9BZE0 524 aaPredicted RBP23.34■■□□□ 1.33
PKD1-209ENST00000472659 MROH5Q6ZUA9 1318 aa23.33■■□□□ 1.33
PKD1-209ENST00000472659 MYO3BQ8WXR4 1341 aa23.33■■□□□ 1.33
PKD1-209ENST00000472659 RASSF10A6NK89 507 aa23.33■■□□□ 1.33
PKD1-209ENST00000472659 IPO8O15397 1037 aaKnown RBP23.33■■□□□ 1.33
PKD1-209ENST00000472659 PLIN1O60240 522 aa23.33■■□□□ 1.33
PKD1-209ENST00000472659 USP17L8P0C7I0 530 aa23.33■■□□□ 1.33
PKD1-209ENST00000472659 CST9Q5W186 159 aa23.33■■□□□ 1.33
PKD1-209ENST00000472659 ATF7IPQ6VMQ6 1270 aa23.33■■□□□ 1.33
PKD1-209ENST00000472659 VGLL2Q8N8G2 317 aa23.33■■□□□ 1.33
PKD1-209ENST00000472659 KLHDC4Q8TBB5 520 aa23.33■■□□□ 1.33
PKD1-209ENST00000472659 MEIS3Q99687 375 aa23.33■■□□□ 1.33
PKD1-209ENST00000472659 MKRN1Q9UHC7 482 aaKnown RBP23.33■■□□□ 1.33
PKD1-209ENST00000472659 TNNQ9UQP3 1299 aa23.33■■□□□ 1.33
PKD1-209ENST00000472659 IL1R1P14778 569 aa23.32■■□□□ 1.32
PKD1-209ENST00000472659 UBE4AQ14139 1066 aa23.32■■□□□ 1.32
PKD1-209ENST00000472659 RBM26Q5T8P6 1007 aaKnown RBP23.31■■□□□ 1.32
PKD1-209ENST00000472659 TTLL5Q6EMB2 1281 aa23.31■■□□□ 1.32
PKD1-209ENST00000472659 CDC37L1Q7L3B6 337 aa23.31■■□□□ 1.32
PKD1-209ENST00000472659 ZNF804AQ7Z570 1209 aa23.31■■□□□ 1.32
PKD1-209ENST00000472659 MYOZ2Q9NPC6 264 aa23.31■■□□□ 1.32
PKD1-209ENST00000472659 LRRFIP2Q9Y608 721 aaKnown RBP23.31■■□□□ 1.32
PKD1-209ENST00000472659 GTF2IP78347 998 aa23.3■■□□□ 1.32
PKD1-209ENST00000472659 PTPN12Q05209 780 aaKnown RBP23.3■■□□□ 1.32
PKD1-209ENST00000472659 FRAT1Q92837 279 aaPredicted RBP23.3■■□□□ 1.32
PKD1-209ENST00000472659 FBXW7Q969H0 707 aa23.3■■□□□ 1.32
PKD1-209ENST00000472659 ASTN2O75129 1339 aaPredicted RBP23.3■■□□□ 1.32
PKD1-209ENST00000472659 VEGFBP49765 207 aa23.29■■□□□ 1.32
PKD1-209ENST00000472659 METTL24Q5JXM2 366 aa23.29■■□□□ 1.32
PKD1-209ENST00000472659 GGA3Q9NZ52 723 aa23.29■■□□□ 1.32
PKD1-209ENST00000472659 PDE8BO95263 885 aa23.27■■□□□ 1.32
PKD1-209ENST00000472659 DEFB115Q30KQ5 88 aa23.27■■□□□ 1.32
PKD1-209ENST00000472659 ZKSCAN2Q63HK3 967 aa23.27■■□□□ 1.32
PKD1-209ENST00000472659 KRT26Q7Z3Y9 468 aa23.27■■□□□ 1.32
PKD1-209ENST00000472659 USP48Q86UV5 1035 aa23.27■■□□□ 1.32
PKD1-209ENST00000472659 CERS5Q8N5B7 392 aa23.27■■□□□ 1.32
PKD1-209ENST00000472659 FAM84BQ96KN1 310 aaPredicted RBP23.27■■□□□ 1.32
PKD1-209ENST00000472659 HDAC5Q9UQL6 1122 aa23.27■■□□□ 1.32
PKD1-209ENST00000472659 POLR2AP24928 1970 aaKnown RBP23.27■■□□□ 1.32
PKD1-209ENST00000472659 EYA2O00167 538 aa23.26■■□□□ 1.31
PKD1-209ENST00000472659 CELF2O95319 508 aaKnown RBP23.26■■□□□ 1.31
PKD1-209ENST00000472659 GNAI3P08754 354 aa23.26■■□□□ 1.31
PKD1-209ENST00000472659 GYG1P46976 350 aa23.26■■□□□ 1.31
PKD1-209ENST00000472659 MMP14P50281 582 aa23.26■■□□□ 1.31
PKD1-209ENST00000472659 SCARF1Q14162 830 aa23.26■■□□□ 1.31
PKD1-209ENST00000472659 DLK2Q6UY11 383 aa23.26■■□□□ 1.31
PKD1-209ENST00000472659 ATG9AQ7Z3C6 839 aa23.26■■□□□ 1.31
PKD1-209ENST00000472659 CLUAP1Q96AJ1 413 aa23.26■■□□□ 1.31
PKD1-209ENST00000472659 DCPSQ96C86 337 aaKnown RBP23.26■■□□□ 1.31
PKD1-209ENST00000472659 ABT1Q9ULW3 272 aaKnown RBP23.26■■□□□ 1.31
PKD1-209ENST00000472659 THSD7BQ9C0I4 1608 aa23.26■■□□□ 1.31
PKD1-209ENST00000472659 ARAP2Q8WZ64 1704 aa23.25■■□□□ 1.31
PKD1-209ENST00000472659 ADM5C9JUS6 153 aa23.25■■□□□ 1.31
PKD1-209ENST00000472659 FKBP1AP62942 108 aaKnown RBP23.25■■□□□ 1.31
PKD1-209ENST00000472659 KIAA0825Q8IV33 1275 aa23.25■■□□□ 1.31
PKD1-209ENST00000472659 OGFOD1Q8N543 542 aa23.25■■□□□ 1.31
PKD1-209ENST00000472659 TDRD7Q8NHU6 1098 aaKnown RBP23.25■■□□□ 1.31
PKD1-209ENST00000472659 WBP1LQ9NX94 342 aa23.25■■□□□ 1.31
PKD1-209ENST00000472659 TLL2Q9Y6L7 1015 aa23.25■■□□□ 1.31
PKD1-209ENST00000472659 FAM205AQ6ZU69 1335 aa23.25■■□□□ 1.31
PKD1-209ENST00000472659 PITPNM2Q9BZ72 1349 aa23.25■■□□□ 1.31
PKD1-209ENST00000472659 FGFR2P21802 821 aa23.24■■□□□ 1.31
PKD1-209ENST00000472659 HIBADHP31937 336 aaKnown RBP23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms