RNA–Protein interactions for RNA: ENST00000470953.1

VARS-222, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-222ENST00000470953 CDCA8Q53HL2 280 aa7.95□□□□□ -1.14
VARS-222ENST00000470953 LDLRAD1Q5T700 205 aa7.95□□□□□ -1.14
VARS-222ENST00000470953 OTUD7BQ6GQQ9 843 aa7.95□□□□□ -1.14
VARS-222ENST00000470953 NBPF10Q6P3W6 841 aaKnown RBP7.95□□□□□ -1.14
VARS-222ENST00000470953 RPGRQ92834 1020 aaKnown RBP7.95□□□□□ -1.14
VARS-222ENST00000470953 CRAMP1Q96RY5 1269 aa7.95□□□□□ -1.14
VARS-222ENST00000470953 TEX13AQ9BXU3 409 aaPredicted RBP7.95□□□□□ -1.14
VARS-222ENST00000470953 KCNQ5Q9NR82 932 aa7.95□□□□□ -1.14
VARS-222ENST00000470953 RTL9Q8NET4 1388 aa7.95□□□□□ -1.14
VARS-222ENST00000470953 DUOX1Q9NRD9 1551 aa7.94□□□□□ -1.14
VARS-222ENST00000470953 SMIM22K7EJ46 135 aa7.94□□□□□ -1.14
VARS-222ENST00000470953 ZBTB48P10074 688 aaPredicted RBP7.94□□□□□ -1.14
VARS-222ENST00000470953 RPS12P25398 132 aaKnown RBP7.94□□□□□ -1.14
VARS-222ENST00000470953 GJA5P36382 358 aa7.94□□□□□ -1.14
VARS-222ENST00000470953 DPP8Q6V1X1 898 aaPredicted RBP7.94□□□□□ -1.14
VARS-222ENST00000470953 ARMC9Q7Z3E5 817 aa7.94□□□□□ -1.14
VARS-222ENST00000470953 NECAB2Q7Z6G3 386 aa7.94□□□□□ -1.14
VARS-222ENST00000470953 NPM2Q86SE8 214 aaKnown RBP7.94□□□□□ -1.14
VARS-222ENST00000470953 IL27Q8NEV9 243 aa7.94□□□□□ -1.14
VARS-222ENST00000470953 IL17REQ8NFR9 667 aa7.94□□□□□ -1.14
VARS-222ENST00000470953 KHSRPQ92945 711 aaKnown RBP eCLIP7.94□□□□□ -1.14
VARS-222ENST00000470953 CLMNQ96JQ2 1002 aa7.94□□□□□ -1.14
VARS-222ENST00000470953 PHOX2BQ99453 314 aa7.94□□□□□ -1.14
VARS-222ENST00000470953 POLR3GLQ9BT43 218 aa7.94□□□□□ -1.14
VARS-222ENST00000470953 ZNF652Q9Y2D9 606 aa7.94□□□□□ -1.14
VARS-222ENST00000470953 ATP6V0A2Q9Y487 856 aa7.94□□□□□ -1.14
VARS-222ENST00000470953 RIPOR2Q9Y4F9 1068 aa7.94□□□□□ -1.14
VARS-222ENST00000470953 FAM205AQ6ZU69 1335 aa7.94□□□□□ -1.14
VARS-222ENST00000470953 SPTBN4Q9H254 2564 aa7.94□□□□□ -1.14
VARS-222ENST00000470953 ST18O60284 1047 aa7.93□□□□□ -1.14
VARS-222ENST00000470953 HMOX1P09601 288 aa7.93□□□□□ -1.14
VARS-222ENST00000470953 CTGFP29279 349 aa7.93□□□□□ -1.14
VARS-222ENST00000470953 LACTBP83111 547 aaPredicted RBP7.93□□□□□ -1.14
VARS-222ENST00000470953 MAP3K11Q16584 847 aa7.93□□□□□ -1.14
VARS-222ENST00000470953 RBM17Q96I25 401 aaKnown RBP7.93□□□□□ -1.14
VARS-222ENST00000470953 DBNDD1Q9H9R9 158 aa7.93□□□□□ -1.14
VARS-222ENST00000470953 BIN2Q9UBW5 565 aaPredicted RBP7.93□□□□□ -1.14
VARS-222ENST00000470953 ANGEL1Q9UNK9 670 aaKnown RBP7.93□□□□□ -1.14
VARS-222ENST00000470953 EPG5Q9HCE0 2579 aa7.93□□□□□ -1.14
VARS-222ENST00000470953 NF2P35240 595 aa7.92□□□□□ -1.14
VARS-222ENST00000470953 PRMT2P55345 433 aa7.92□□□□□ -1.14
VARS-222ENST00000470953 UBXN2AP68543 259 aa7.92□□□□□ -1.14
VARS-222ENST00000470953 GRIN2CQ14957 1233 aa7.92□□□□□ -1.14
VARS-222ENST00000470953 TAF1CQ15572 869 aaPredicted RBP7.92□□□□□ -1.14
VARS-222ENST00000470953 RAET1EQ8TD07 263 aa7.92□□□□□ -1.14
VARS-222ENST00000470953 SLC10A4Q96EP9 437 aa7.92□□□□□ -1.14
VARS-222ENST00000470953 FBXL18Q96ME1 805 aa7.92□□□□□ -1.14
VARS-222ENST00000470953 DEFB118Q96PH6 123 aa7.92□□□□□ -1.14
VARS-222ENST00000470953 FMNL2Q96PY5 1086 aa7.92□□□□□ -1.14
VARS-222ENST00000470953 SRRDQ9UH36 339 aa7.92□□□□□ -1.14
VARS-222ENST00000470953 UBN2Q6ZU65 1347 aa7.92□□□□□ -1.14
VARS-222ENST00000470953 DCHS1Q96JQ0 3298 aa7.91□□□□□ -1.14
VARS-222ENST00000470953 TESPA1A2RU30 521 aaPredicted RBP7.91□□□□□ -1.14
VARS-222ENST00000470953 COL9A2Q14055 689 aaPredicted RBP7.91□□□□□ -1.14
VARS-222ENST00000470953 KIF22Q14807 665 aa7.91□□□□□ -1.14
VARS-222ENST00000470953 SUSD4Q5VX71 490 aa7.91□□□□□ -1.14
VARS-222ENST00000470953 POTEEQ6S8J3 1075 aa7.91□□□□□ -1.14
VARS-222ENST00000470953 TRIM47Q96LD4 638 aa7.91□□□□□ -1.14
VARS-222ENST00000470953 TMX4Q9H1E5 349 aaPredicted RBP7.91□□□□□ -1.14
VARS-222ENST00000470953 ZFYVE28Q9HCC9 887 aa7.91□□□□□ -1.14
VARS-222ENST00000470953 LAMB2P55268 1798 aa7.91□□□□□ -1.14
VARS-222ENST00000470953 ATRXP46100 2492 aa7.91□□□□□ -1.14
VARS-222ENST00000470953 UNC79Q9P2D8 2635 aa7.91□□□□□ -1.14
VARS-222ENST00000470953 ABCC4O15439 1325 aa7.9□□□□□ -1.14
VARS-222ENST00000470953 GNRH1P01148 92 aa7.9□□□□□ -1.14
VARS-222ENST00000470953 BMP1P13497 986 aa7.9□□□□□ -1.14
VARS-222ENST00000470953 OSBPP22059 807 aa7.9□□□□□ -1.14
VARS-222ENST00000470953 GPTP24298 496 aa7.9□□□□□ -1.14
VARS-222ENST00000470953 ZNF280AP59817 542 aaPredicted RBP7.9□□□□□ -1.14
VARS-222ENST00000470953 EIF4G2P78344 907 aaKnown RBP eCLIP7.9□□□□□ -1.14
VARS-222ENST00000470953 CRISPLD2Q9H0B8 497 aa7.9□□□□□ -1.14
VARS-222ENST00000470953 SCN9AQ15858 1988 aa7.9□□□□□ -1.15
VARS-222ENST00000470953 SIPA1L3O60292 1781 aaPredicted RBP7.89□□□□□ -1.15
VARS-222ENST00000470953 DDX60LQ5H9U9 1706 aaKnown RBP7.89□□□□□ -1.15
VARS-222ENST00000470953 RGS20O76081 388 aa7.89□□□□□ -1.15
VARS-222ENST00000470953 TEFQ10587 303 aa7.89□□□□□ -1.15
VARS-222ENST00000470953 NBPF9Q3BBW0 867 aa7.89□□□□□ -1.15
VARS-222ENST00000470953 SP8Q8IXZ3 490 aa7.89□□□□□ -1.15
VARS-222ENST00000470953 NGEFQ8N5V2 710 aa7.89□□□□□ -1.15
VARS-222ENST00000470953 NYXQ9GZU5 481 aa7.89□□□□□ -1.15
VARS-222ENST00000470953 MYOZ2Q9NPC6 264 aa7.89□□□□□ -1.15
VARS-222ENST00000470953 COL3A1P02461 1466 aaPredicted RBP7.88□□□□□ -1.15
VARS-222ENST00000470953 MYPNQ86TC9 1320 aa7.88□□□□□ -1.15
VARS-222ENST00000470953 BTBD11A6QL63 1104 aa7.88□□□□□ -1.15
VARS-222ENST00000470953 RIMBP2O15034 1052 aa7.88□□□□□ -1.15
VARS-222ENST00000470953 ECE2O60344 883 aa7.88□□□□□ -1.15
VARS-222ENST00000470953 NTSR2O95665 410 aa7.88□□□□□ -1.15
VARS-222ENST00000470953 SMAD3P84022 425 aaKnown RBP7.88□□□□□ -1.15
VARS-222ENST00000470953 DOK7Q18PE1 504 aa7.88□□□□□ -1.15
VARS-222ENST00000470953 FAM43AQ8N2R8 423 aa7.88□□□□□ -1.15
VARS-222ENST00000470953 BRI3BPQ8WY22 251 aa7.88□□□□□ -1.15
VARS-222ENST00000470953 DDX60Q8IY21 1712 aaKnown RBP7.88□□□□□ -1.15
VARS-222ENST00000470953 CFAP47Q6ZTR5 3102 aa7.88□□□□□ -1.15
VARS-222ENST00000470953 PRR33A8MZF0 331 aa7.87□□□□□ -1.15
VARS-222ENST00000470953 VIL1P09327 827 aaKnown RBP7.87□□□□□ -1.15
VARS-222ENST00000470953 ITGB8P26012 769 aa7.87□□□□□ -1.15
VARS-222ENST00000470953 PSMC4P43686 418 aa7.87□□□□□ -1.15
VARS-222ENST00000470953 KCNQ1P51787 676 aa7.87□□□□□ -1.15
VARS-222ENST00000470953 SHHQ15465 462 aa7.87□□□□□ -1.15
VARS-222ENST00000470953 CCDC85BQ15834 202 aaPredicted RBP7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 192.2 ms