RNA–Protein interactions for RNA: ENST00000470094.1

BRCA2-202, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 5

Gene BRCA2, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-202ENST00000470094 A0A0A0MRY4 1105 aa7.16□□□□□ -1.26
BRCA2-202ENST00000470094 PDE2AO00408 941 aaPredicted RBP7.16□□□□□ -1.26
BRCA2-202ENST00000470094 EIF1AYO14602 144 aaKnown RBP7.16□□□□□ -1.26
BRCA2-202ENST00000470094 USPL1Q5W0Q7 1092 aa7.16□□□□□ -1.26
BRCA2-202ENST00000470094 GALNT12Q8IXK2 581 aa7.16□□□□□ -1.26
BRCA2-202ENST00000470094 DTWD1Q8N5C7 304 aa7.16□□□□□ -1.26
BRCA2-202ENST00000470094 ASB16Q96NS5 453 aa7.16□□□□□ -1.26
BRCA2-202ENST00000470094 CSRNP1Q96S65 589 aa7.16□□□□□ -1.26
BRCA2-202ENST00000470094 ZKSCAN3Q9BRR0 538 aa7.16□□□□□ -1.26
BRCA2-202ENST00000470094 MUC3BQ9H195 1237 aa7.16□□□□□ -1.26
BRCA2-202ENST00000470094 LATS2Q9NRM7 1088 aa7.16□□□□□ -1.26
BRCA2-202ENST00000470094 TREHO43280 583 aa7.15□□□□□ -1.26
BRCA2-202ENST00000470094 TRPA1O75762 1119 aa7.15□□□□□ -1.26
BRCA2-202ENST00000470094 CDC27P30260 824 aa7.15□□□□□ -1.26
BRCA2-202ENST00000470094 BAG6P46379 1132 aa7.15□□□□□ -1.26
BRCA2-202ENST00000470094 PLCB3Q01970 1234 aa7.15□□□□□ -1.26
BRCA2-202ENST00000470094 TMEM102Q8N9M5 508 aaPredicted RBP7.15□□□□□ -1.26
BRCA2-202ENST00000470094 POP1Q99575 1024 aaKnown RBP7.15□□□□□ -1.26
BRCA2-202ENST00000470094 GZF1Q9H116 711 aaPredicted RBP7.15□□□□□ -1.26
BRCA2-202ENST00000470094 PPME1Q9Y570 386 aa7.15□□□□□ -1.26
BRCA2-202ENST00000470094 KRBA1A5PL33 1030 aa7.14□□□□□ -1.27
BRCA2-202ENST00000470094 NFKBIEO00221 500 aa7.14□□□□□ -1.27
BRCA2-202ENST00000470094 ELNP15502 786 aa7.14□□□□□ -1.27
BRCA2-202ENST00000470094 PEAR1Q5VY43 1037 aaPredicted RBP7.14□□□□□ -1.27
BRCA2-202ENST00000470094 FMR1NBQ8N0W7 255 aaPredicted RBP7.14□□□□□ -1.27
BRCA2-202ENST00000470094 HHIPQ96QV1 700 aa7.14□□□□□ -1.27
BRCA2-202ENST00000470094 ZBTB7CA1YPR0 619 aa7.13□□□□□ -1.27
BRCA2-202ENST00000470094 APBA3O96018 575 aa7.13□□□□□ -1.27
BRCA2-202ENST00000470094 CABP4P57796 275 aa7.13□□□□□ -1.27
BRCA2-202ENST00000470094 DSC3Q14574 896 aa7.13□□□□□ -1.27
BRCA2-202ENST00000470094 SUZ12Q15022 739 aaKnown RBP7.13□□□□□ -1.27
BRCA2-202ENST00000470094 ILDR2Q71H61 639 aa7.13□□□□□ -1.27
BRCA2-202ENST00000470094 NXPE3Q969Y0 559 aa7.13□□□□□ -1.27
BRCA2-202ENST00000470094 CCDC74AQ96AQ1 378 aa7.13□□□□□ -1.27
BRCA2-202ENST00000470094 NACC1Q96RE7 527 aa7.13□□□□□ -1.27
BRCA2-202ENST00000470094 SRA1Q9HD15 236 aaKnown RBP7.13□□□□□ -1.27
BRCA2-202ENST00000470094 NPHS2Q9NP85 383 aa7.13□□□□□ -1.27
BRCA2-202ENST00000470094 PNMA6FA0A0J9YX94 578 aa7.12□□□□□ -1.27
BRCA2-202ENST00000470094 A0A1W2PP55 124 aa7.12□□□□□ -1.27
BRCA2-202ENST00000470094 MAPK8P45983 427 aa7.12□□□□□ -1.27
BRCA2-202ENST00000470094 GRIK4Q16099 956 aa7.12□□□□□ -1.27
BRCA2-202ENST00000470094 FAM117BQ6P1L5 589 aa7.12□□□□□ -1.27
BRCA2-202ENST00000470094 FBXO11Q86XK2 927 aa7.12□□□□□ -1.27
BRCA2-202ENST00000470094 MAP4K3Q8IVH8 894 aa7.12□□□□□ -1.27
BRCA2-202ENST00000470094 ASAP3Q8TDY4 903 aa7.12□□□□□ -1.27
BRCA2-202ENST00000470094 DCAF11Q8TEB1 546 aa7.12□□□□□ -1.27
BRCA2-202ENST00000470094 BHLHE41Q9C0J9 482 aaPredicted RBP7.12□□□□□ -1.27
BRCA2-202ENST00000470094 ADAM19Q9H013 955 aa7.12□□□□□ -1.27
BRCA2-202ENST00000470094 SH2B1Q9NRF2 756 aaPredicted RBP7.12□□□□□ -1.27
BRCA2-202ENST00000470094 LINC01387J3KSC0 135 aa7.11□□□□□ -1.27
BRCA2-202ENST00000470094 EPHA1P21709 976 aa7.11□□□□□ -1.27
BRCA2-202ENST00000470094 CDC25BP30305 580 aa7.11□□□□□ -1.27
BRCA2-202ENST00000470094 FMR1Q06787 632 aaKnown RBP eCLIP7.11□□□□□ -1.27
BRCA2-202ENST00000470094 ENOX2Q16206 610 aaKnown RBP7.11□□□□□ -1.27
BRCA2-202ENST00000470094 PLA2G4EQ3MJ16 856 aa7.11□□□□□ -1.27
BRCA2-202ENST00000470094 KIAA0319Q5VV43 1072 aa7.11□□□□□ -1.27
BRCA2-202ENST00000470094 TXNDC11Q6PKC3 985 aa7.11□□□□□ -1.27
BRCA2-202ENST00000470094 ADAMTSL4Q6UY14 1074 aa7.11□□□□□ -1.27
BRCA2-202ENST00000470094 BSNDQ8WZ55 320 aa7.11□□□□□ -1.27
BRCA2-202ENST00000470094 EHD4Q9H223 541 aa7.11□□□□□ -1.27
BRCA2-202ENST00000470094 LIN7BQ9HAP6 207 aa7.11□□□□□ -1.27
BRCA2-202ENST00000470094 GADD45BO75293 160 aaPredicted RBP7.1□□□□□ -1.27
BRCA2-202ENST00000470094 DEAF1O75398 565 aaPredicted RBP7.1□□□□□ -1.27
BRCA2-202ENST00000470094 CCNJLQ8IV13 435 aa7.1□□□□□ -1.27
BRCA2-202ENST00000470094 NLRP2Q9NX02 1062 aa7.1□□□□□ -1.27
BRCA2-202ENST00000470094 SOX13Q9UN79 622 aa7.1□□□□□ -1.27
BRCA2-202ENST00000470094 C9orf172C9J069 976 aa7.09□□□□□ -1.27
BRCA2-202ENST00000470094 H3BRJ5 948 aa7.09□□□□□ -1.27
BRCA2-202ENST00000470094 CHRNA4P43681 627 aa7.09□□□□□ -1.27
BRCA2-202ENST00000470094 ATP2B2Q01814 1243 aa7.09□□□□□ -1.27
BRCA2-202ENST00000470094 SETDB1Q15047 1291 aa7.09□□□□□ -1.27
BRCA2-202ENST00000470094 CCDC27Q2M243 656 aa7.09□□□□□ -1.27
BRCA2-202ENST00000470094 CD163Q86VB7 1156 aa7.09□□□□□ -1.27
BRCA2-202ENST00000470094 EPS8L3Q8TE67 593 aaKnown RBP7.09□□□□□ -1.27
BRCA2-202ENST00000470094 ANKRD33BA6NCL7 494 aa7.08□□□□□ -1.28
BRCA2-202ENST00000470094 C1QTNF9BB2RNN3 333 aa7.08□□□□□ -1.28
BRCA2-202ENST00000470094 SELPP16109 830 aa7.08□□□□□ -1.28
BRCA2-202ENST00000470094 PIP4K2BP78356 416 aa7.08□□□□□ -1.28
BRCA2-202ENST00000470094 NRG1Q02297 640 aaPredicted RBP7.08□□□□□ -1.28
BRCA2-202ENST00000470094 GPAT2Q6NUI2 795 aa7.08□□□□□ -1.28
BRCA2-202ENST00000470094 TCF12Q99081 682 aa7.08□□□□□ -1.28
BRCA2-202ENST00000470094 CARD10Q9BWT7 1032 aa7.08□□□□□ -1.28
BRCA2-202ENST00000470094 SEC31BQ9NQW1 1179 aa7.08□□□□□ -1.28
BRCA2-202ENST00000470094 USP21Q9UK80 565 aa7.08□□□□□ -1.28
BRCA2-202ENST00000470094 TRAK1Q9UPV9 953 aa7.08□□□□□ -1.28
BRCA2-202ENST00000470094 A0A096LPE4 126 aa7.07□□□□□ -1.28
BRCA2-202ENST00000470094 A0A1W2PPZ6 126 aa7.07□□□□□ -1.28
BRCA2-202ENST00000470094 METTL12A8MUP2 240 aa7.07□□□□□ -1.28
BRCA2-202ENST00000470094 DLL1O00548 723 aa7.07□□□□□ -1.28
BRCA2-202ENST00000470094 FSCN2O14926 492 aa7.07□□□□□ -1.28
BRCA2-202ENST00000470094 P4HBP07237 508 aaKnown RBP7.07□□□□□ -1.28
BRCA2-202ENST00000470094 IGF2-ASQ6U949 168 aa7.07□□□□□ -1.28
BRCA2-202ENST00000470094 SHISA2Q6UWI4 295 aa7.07□□□□□ -1.28
BRCA2-202ENST00000470094 KLHL23Q8NBE8 558 aa7.07□□□□□ -1.28
BRCA2-202ENST00000470094 FBF1Q8TES7 1133 aa7.07□□□□□ -1.28
BRCA2-202ENST00000470094 SLC7A3Q8WY07 619 aa7.07□□□□□ -1.28
BRCA2-202ENST00000470094 WNT8BQ93098 351 aa7.07□□□□□ -1.28
BRCA2-202ENST00000470094 LENG1Q96BZ8 264 aaPredicted RBP7.07□□□□□ -1.28
BRCA2-202ENST00000470094 IGHA1P01876 353 aa7.06□□□□□ -1.28
BRCA2-202ENST00000470094 ITGB2P05107 769 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms