RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 KIF3AQ9Y496 699 aa16.06■□□□□ 0.16
BRCA1-209ENST00000470026 PCDH11XQ9BZA7 1347 aa16.06■□□□□ 0.16
BRCA1-209ENST00000470026 PCDH11YQ9BZA8 1340 aa16.06■□□□□ 0.16
BRCA1-209ENST00000470026 CTAGE5O15320 804 aa16.06■□□□□ 0.16
BRCA1-209ENST00000470026 CDC25BP30305 580 aa16.06■□□□□ 0.16
BRCA1-209ENST00000470026 CHMP4CQ96CF2 233 aa16.06■□□□□ 0.16
BRCA1-209ENST00000470026 NEUROD6Q96NK8 337 aa16.06■□□□□ 0.16
BRCA1-209ENST00000470026 FBXO3Q9UK99 471 aa16.06■□□□□ 0.16
BRCA1-209ENST00000470026 PTGS1P23219 599 aa16.05■□□□□ 0.16
BRCA1-209ENST00000470026 ZNF165P49910 485 aa16.05■□□□□ 0.16
BRCA1-209ENST00000470026 APOBRQ0VD83 1088 aa16.05■□□□□ 0.16
BRCA1-209ENST00000470026 SLFNL1Q499Z3 407 aa16.05■□□□□ 0.16
BRCA1-209ENST00000470026 LRRC24Q50LG9 513 aa16.05■□□□□ 0.16
BRCA1-209ENST00000470026 SARM1Q6SZW1 724 aa16.05■□□□□ 0.16
BRCA1-209ENST00000470026 DDX60Q8IY21 1712 aaKnown RBP16.05■□□□□ 0.16
BRCA1-209ENST00000470026 A0A1B0GUL7 405 aa16.04■□□□□ 0.16
BRCA1-209ENST00000470026 IFIT1P09914 478 aaKnown RBP16.04■□□□□ 0.16
BRCA1-209ENST00000470026 PDIA3P30101 505 aaKnown RBP16.04■□□□□ 0.16
BRCA1-209ENST00000470026 IQCB1Q15051 598 aa16.04■□□□□ 0.16
BRCA1-209ENST00000470026 ISCA1Q9BUE6 129 aa16.04■□□□□ 0.16
BRCA1-209ENST00000470026 SHANK3Q9BYB0 1731 aa16.04■□□□□ 0.16
BRCA1-209ENST00000470026 NWD2Q9ULI1 1742 aa16.04■□□□□ 0.16
BRCA1-209ENST00000470026 SNW1Q13573 536 aaKnown RBP16.04■□□□□ 0.16
BRCA1-209ENST00000470026 ENGASEQ8NFI3 743 aa16.04■□□□□ 0.16
BRCA1-209ENST00000470026 DNAJC25Q9H1X3 360 aa16.04■□□□□ 0.16
BRCA1-209ENST00000470026 WDR17Q8IZU2 1322 aa16.03■□□□□ 0.16
BRCA1-209ENST00000470026 A0A0G2JLW4 131 aa16.03■□□□□ 0.16
BRCA1-209ENST00000470026 A1BGP04217 495 aa16.03■□□□□ 0.16
BRCA1-209ENST00000470026 FGD1P98174 961 aa16.03■□□□□ 0.16
BRCA1-209ENST00000470026 CADPS2Q86UW7 1296 aa16.03■□□□□ 0.16
BRCA1-209ENST00000470026 CCDC186Q7Z3E2 898 aa16.03■□□□□ 0.16
BRCA1-209ENST00000470026 ILDR1Q86SU0 546 aaPredicted RBP16.03■□□□□ 0.16
BRCA1-209ENST00000470026 ZNF710Q8N1W2 664 aa16.03■□□□□ 0.16
BRCA1-209ENST00000470026 ZCRB1Q8TBF4 217 aaKnown RBP16.03■□□□□ 0.16
BRCA1-209ENST00000470026 ZNF396Q96N95 335 aaPredicted RBP16.03■□□□□ 0.16
BRCA1-209ENST00000470026 USP28Q96RU2 1077 aa16.03■□□□□ 0.16
BRCA1-209ENST00000470026 ABCC12Q96J65 1359 aa16.02■□□□□ 0.16
BRCA1-209ENST00000470026 M0R2C6 588 aa16.02■□□□□ 0.16
BRCA1-209ENST00000470026 FOXP2O15409 715 aa16.02■□□□□ 0.16
BRCA1-209ENST00000470026 CCAR1Q8IX12 1150 aaKnown RBP16.02■□□□□ 0.16
BRCA1-209ENST00000470026 GOLPH3LQ9H4A5 285 aa16.02■□□□□ 0.16
BRCA1-209ENST00000470026 FDPSP14324 419 aaKnown RBP16.01■□□□□ 0.15
BRCA1-209ENST00000470026 TRIM28Q13263 835 aaKnown RBP16.01■□□□□ 0.15
BRCA1-209ENST00000470026 OSBP2Q969R2 916 aa16.01■□□□□ 0.15
BRCA1-209ENST00000470026 ZNF594Q96JF6 807 aaPredicted RBP16.01■□□□□ 0.15
BRCA1-209ENST00000470026 TRIM5Q9C035 493 aa16.01■□□□□ 0.15
BRCA1-209ENST00000470026 CARMIL3Q8ND23 1372 aa16.01■□□□□ 0.15
BRCA1-209ENST00000470026 ZFYP08048 801 aaPredicted RBP16.01■□□□□ 0.15
BRCA1-209ENST00000470026 ZSCAN25Q6NSZ9 544 aa16.01■□□□□ 0.15
BRCA1-209ENST00000470026 RGS22Q8NE09 1264 aa16.01■□□□□ 0.15
BRCA1-209ENST00000470026 PLA2G12BQ9BX93 195 aa16.01■□□□□ 0.15
BRCA1-209ENST00000470026 PUS3Q9BZE2 481 aaKnown RBP16.01■□□□□ 0.15
BRCA1-209ENST00000470026 CCT2P78371 535 aaKnown RBP16■□□□□ 0.15
BRCA1-209ENST00000470026 FAM160A1Q05DH4 1040 aa16■□□□□ 0.15
BRCA1-209ENST00000470026 STX1AQ16623 288 aa16■□□□□ 0.15
BRCA1-209ENST00000470026 LRRFIP1Q32MZ4 808 aaKnown RBP16■□□□□ 0.15
BRCA1-209ENST00000470026 MRFAP1L1Q96HT8 127 aa16■□□□□ 0.15
BRCA1-209ENST00000470026 FTOQ9C0B1 505 aaKnown RBP eCLIP16■□□□□ 0.15
BRCA1-209ENST00000470026 NCOA5Q9HCD5 579 aaKnown RBP16■□□□□ 0.15
BRCA1-209ENST00000470026 CEP126Q9P2H0 1117 aa16■□□□□ 0.15
BRCA1-209ENST00000470026 CTNNA3Q9UI47 895 aa16■□□□□ 0.15
BRCA1-209ENST00000470026 CCDC9Q9Y3X0 531 aaKnown RBP16■□□□□ 0.15
BRCA1-209ENST00000470026 CTIFO43310 598 aaKnown RBP16■□□□□ 0.15
BRCA1-209ENST00000470026 C11orf57Q6ZUT1 292 aaPredicted RBP16■□□□□ 0.15
BRCA1-209ENST00000470026 VSIG10Q8N0Z9 540 aa16■□□□□ 0.15
BRCA1-209ENST00000470026 ZBTB3Q9H5J0 574 aa16■□□□□ 0.15
BRCA1-209ENST00000470026 RTEL1Q9NZ71 1219 aa16■□□□□ 0.15
BRCA1-209ENST00000470026 NRBP1Q9UHY1 535 aa16■□□□□ 0.15
BRCA1-209ENST00000470026 COL5A2P05997 1499 aaPredicted RBP16■□□□□ 0.15
BRCA1-209ENST00000470026 TCIRG1Q13488 830 aa15.99■□□□□ 0.15
BRCA1-209ENST00000470026 TTLL5Q6EMB2 1281 aa15.99■□□□□ 0.15
BRCA1-209ENST00000470026 AKAP2Q9Y2D5 859 aa15.99■□□□□ 0.15
BRCA1-209ENST00000470026 WDR19Q8NEZ3 1342 aa15.99■□□□□ 0.15
BRCA1-209ENST00000470026 A0A1W2PQ27 194 aa15.98■□□□□ 0.15
BRCA1-209ENST00000470026 A0A1W2PQ64 194 aa15.98■□□□□ 0.15
BRCA1-209ENST00000470026 A0A1W2PQD8 194 aa15.98■□□□□ 0.15
BRCA1-209ENST00000470026 LRMPQ12912 555 aa15.98■□□□□ 0.15
BRCA1-209ENST00000470026 CCDC73Q6ZRK6 1079 aa15.98■□□□□ 0.15
BRCA1-209ENST00000470026 MB21D2Q8IYB1 491 aaPredicted RBP15.98■□□□□ 0.15
BRCA1-209ENST00000470026 MYH7P12883 1935 aa15.98■□□□□ 0.15
BRCA1-209ENST00000470026 CSF1RP07333 972 aa15.98■□□□□ 0.15
BRCA1-209ENST00000470026 CEBPZQ03701 1054 aaKnown RBP15.98■□□□□ 0.15
BRCA1-209ENST00000470026 CCDC158Q5M9N0 1113 aa15.98■□□□□ 0.15
BRCA1-209ENST00000470026 FMR1NBQ8N0W7 255 aaPredicted RBP15.98■□□□□ 0.15
BRCA1-209ENST00000470026 XAGE2Q96GT9 111 aa15.98■□□□□ 0.15
BRCA1-209ENST00000470026 CLIP2Q9UDT6 1046 aa15.98■□□□□ 0.15
BRCA1-209ENST00000470026 TOGARAM1Q9Y4F4 1720 aa15.97■□□□□ 0.15
BRCA1-209ENST00000470026 RIOK3O14730 519 aaKnown RBP15.97■□□□□ 0.15
BRCA1-209ENST00000470026 CHAF1AQ13111 956 aaPredicted RBP15.97■□□□□ 0.15
BRCA1-209ENST00000470026 CCDC144BQ3MJ40 725 aa15.97■□□□□ 0.15
BRCA1-209ENST00000470026 ADALQ6DHV7 355 aa15.97■□□□□ 0.15
BRCA1-209ENST00000470026 CCDC144CPQ8IYA2 1237 aa15.97■□□□□ 0.15
BRCA1-209ENST00000470026 CACTINQ8WUQ7 758 aaKnown RBP15.97■□□□□ 0.15
BRCA1-209ENST00000470026 APPBP2Q92624 585 aa15.97■□□□□ 0.15
BRCA1-209ENST00000470026 CCDC94Q9BW85 323 aaPredicted RBP15.97■□□□□ 0.15
BRCA1-209ENST00000470026 BCL2L12Q9HB09 334 aa15.97■□□□□ 0.15
BRCA1-209ENST00000470026 PCCAP05165 728 aaPredicted RBP15.97■□□□□ 0.15
BRCA1-209ENST00000470026 CCDC57Q2TAC2 916 aa15.97■□□□□ 0.15
BRCA1-209ENST00000470026 DHX40Q8IX18 779 aaKnown RBP15.97■□□□□ 0.15
BRCA1-209ENST00000470026 TSC1Q92574 1164 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 200.6 ms