RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 RBM47A0AV96 593 aaKnown RBP5.81□□□□□ -1.48
SF3B1-207ENST00000468925 SMTNL1A8MU46 457 aa5.81□□□□□ -1.48
SF3B1-207ENST00000468925 VGLL3A8MV65 326 aa5.81□□□□□ -1.48
SF3B1-207ENST00000468925 KIF2AO00139 706 aaPredicted RBP5.81□□□□□ -1.48
SF3B1-207ENST00000468925 PLIN1O60240 522 aa5.81□□□□□ -1.48
SF3B1-207ENST00000468925 CLSTN1O94985 981 aa5.81□□□□□ -1.48
SF3B1-207ENST00000468925 BAG4O95429 457 aaKnown RBP5.81□□□□□ -1.48
SF3B1-207ENST00000468925 BMP4P12644 408 aa5.81□□□□□ -1.48
SF3B1-207ENST00000468925 AMPD1P23109 780 aa5.81□□□□□ -1.48
SF3B1-207ENST00000468925 SCNN1DP51172 638 aa5.81□□□□□ -1.48
SF3B1-207ENST00000468925 SNRPNP63162 240 aaKnown RBP5.81□□□□□ -1.48
SF3B1-207ENST00000468925 TPM4P67936 248 aa5.81□□□□□ -1.48
SF3B1-207ENST00000468925 SETQ01105 290 aaPredicted RBP5.81□□□□□ -1.48
SF3B1-207ENST00000468925 SEMA3FQ13275 785 aa5.81□□□□□ -1.48
SF3B1-207ENST00000468925 DHX8Q14562 1220 aaKnown RBP5.81□□□□□ -1.48
SF3B1-207ENST00000468925 WDR43Q15061 677 aaKnown RBP eCLIP5.81□□□□□ -1.48
SF3B1-207ENST00000468925 ATP2B3Q16720 1220 aa5.81□□□□□ -1.48
SF3B1-207ENST00000468925 WDR44Q5JSH3 913 aa5.81□□□□□ -1.48
SF3B1-207ENST00000468925 EFHC2Q5JST6 749 aa5.81□□□□□ -1.48
SF3B1-207ENST00000468925 C1orf229Q6ZS94 237 aaPredicted RBP5.81□□□□□ -1.48
SF3B1-207ENST00000468925 CCDC91Q7Z6B0 441 aa5.81□□□□□ -1.48
SF3B1-207ENST00000468925 RHBDD1Q8TEB9 315 aa5.81□□□□□ -1.48
SF3B1-207ENST00000468925 PBXIP1Q96AQ6 731 aa5.81□□□□□ -1.48
SF3B1-207ENST00000468925 KLRG1Q96E93 195 aa5.81□□□□□ -1.48
SF3B1-207ENST00000468925 CALR3Q96L12 384 aaKnown RBP5.81□□□□□ -1.48
SF3B1-207ENST00000468925 CEP83Q9Y592 693 aa5.81□□□□□ -1.48
SF3B1-207ENST00000468925 MRC2Q9UBG0 1479 aa5.81□□□□□ -1.48
SF3B1-207ENST00000468925 KRBA1A5PL33 1030 aa5.8□□□□□ -1.48
SF3B1-207ENST00000468925 OIP5O43482 229 aa5.8□□□□□ -1.48
SF3B1-207ENST00000468925 BNIP3LO60238 219 aa5.8□□□□□ -1.48
SF3B1-207ENST00000468925 SSR1P43307 286 aaKnown RBP5.8□□□□□ -1.48
SF3B1-207ENST00000468925 CTBSQ01459 385 aa5.8□□□□□ -1.48
SF3B1-207ENST00000468925 SATB1Q01826 763 aa5.8□□□□□ -1.48
SF3B1-207ENST00000468925 BMS1Q14692 1282 aaKnown RBP5.8□□□□□ -1.48
SF3B1-207ENST00000468925 ICE2Q659A1 982 aa5.8□□□□□ -1.48
SF3B1-207ENST00000468925 TBC1D9Q6ZT07 1266 aa5.8□□□□□ -1.48
SF3B1-207ENST00000468925 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.8□□□□□ -1.48
SF3B1-207ENST00000468925 BEND7Q8N7W2 519 aaPredicted RBP5.8□□□□□ -1.48
SF3B1-207ENST00000468925 ZNF397Q8NF99 534 aaPredicted RBP5.8□□□□□ -1.48
SF3B1-207ENST00000468925 TSPY26PQ9H489 355 aa5.8□□□□□ -1.48
SF3B1-207ENST00000468925 DEF6Q9H4E7 631 aa5.8□□□□□ -1.48
SF3B1-207ENST00000468925 BSDC1Q9NW68 430 aaPredicted RBP5.8□□□□□ -1.48
SF3B1-207ENST00000468925 CTNNA3Q9UI47 895 aa5.8□□□□□ -1.48
SF3B1-207ENST00000468925 PHF24Q9UPV7 400 aa5.8□□□□□ -1.48
SF3B1-207ENST00000468925 PARP3Q9Y6F1 533 aa5.8□□□□□ -1.48
SF3B1-207ENST00000468925 USP3Q9Y6I4 520 aa5.8□□□□□ -1.48
SF3B1-207ENST00000468925 LAMC1P11047 1609 aa5.8□□□□□ -1.48
SF3B1-207ENST00000468925 BCORL1Q5H9F3 1711 aa5.79□□□□□ -1.48
SF3B1-207ENST00000468925 ABCC2Q92887 1545 aa5.79□□□□□ -1.48
SF3B1-207ENST00000468925 DCDC2BA2VCK2 349 aa5.79□□□□□ -1.48
SF3B1-207ENST00000468925 CARNS1A5YM72 827 aa5.79□□□□□ -1.48
SF3B1-207ENST00000468925 C2CD2LO14523 706 aa5.79□□□□□ -1.48
SF3B1-207ENST00000468925 TPM1P09493 284 aa5.79□□□□□ -1.48
SF3B1-207ENST00000468925 CCDC172P0C7W6 258 aa5.79□□□□□ -1.48
SF3B1-207ENST00000468925 FGFR3P22607 806 aa5.79□□□□□ -1.48
SF3B1-207ENST00000468925 GUCY2CP25092 1073 aa5.79□□□□□ -1.48
SF3B1-207ENST00000468925 USP8P40818 1118 aa5.79□□□□□ -1.48
SF3B1-207ENST00000468925 MAP2K3P46734 347 aa5.79□□□□□ -1.48
SF3B1-207ENST00000468925 MCM2P49736 904 aa5.79□□□□□ -1.48
SF3B1-207ENST00000468925 HDAC1Q13547 482 aaPredicted RBP5.79□□□□□ -1.48
SF3B1-207ENST00000468925 UBAP2LQ14157 1087 aaKnown RBP5.79□□□□□ -1.48
SF3B1-207ENST00000468925 NBPF8Q3BBV2 869 aa5.79□□□□□ -1.48
SF3B1-207ENST00000468925 GLMNQ92990 594 aa5.79□□□□□ -1.48
SF3B1-207ENST00000468925 CARD10Q9BWT7 1032 aa5.79□□□□□ -1.48
SF3B1-207ENST00000468925 FAM107BQ9H098 131 aa5.79□□□□□ -1.48
SF3B1-207ENST00000468925 PANK3Q9H999 370 aa5.79□□□□□ -1.48
SF3B1-207ENST00000468925 MED4Q9NPJ6 270 aa5.79□□□□□ -1.48
SF3B1-207ENST00000468925 FAM53CQ9NYF3 392 aa5.79□□□□□ -1.48
SF3B1-207ENST00000468925 KIAA1522Q9P206 1035 aaPredicted RBP5.79□□□□□ -1.48
SF3B1-207ENST00000468925 FEZ2Q9UHY8 353 aaPredicted RBP5.79□□□□□ -1.48
SF3B1-207ENST00000468925 PTPRKQ15262 1439 aa5.79□□□□□ -1.48
SF3B1-207ENST00000468925 CARMIL1Q5VZK9 1371 aa5.79□□□□□ -1.48
SF3B1-207ENST00000468925 ANKRD36BQ8N2N9 1353 aa5.79□□□□□ -1.48
SF3B1-207ENST00000468925 HMGXB3Q12766 1538 aa5.79□□□□□ -1.48
SF3B1-207ENST00000468925 KDM5DQ9BY66 1539 aa5.79□□□□□ -1.48
SF3B1-207ENST00000468925 UGGT2Q9NYU1 1516 aa5.79□□□□□ -1.48
SF3B1-207ENST00000468925 DENND4BO75064 1496 aaPredicted RBP5.78□□□□□ -1.48
SF3B1-207ENST00000468925 ATAD2BQ9ULI0 1458 aa5.78□□□□□ -1.48
SF3B1-207ENST00000468925 SHROOM2Q13796 1616 aa5.78□□□□□ -1.48
SF3B1-207ENST00000468925 RTEL1-TNFRSF6BF6WH68 1400 aa5.78□□□□□ -1.48
SF3B1-207ENST00000468925 SMARCA5O60264 1052 aaPredicted RBP5.78□□□□□ -1.48
SF3B1-207ENST00000468925 NEMFO60524 1076 aa5.78□□□□□ -1.48
SF3B1-207ENST00000468925 PIK3C2GO75747 1445 aa5.78□□□□□ -1.48
SF3B1-207ENST00000468925 INHAP05111 366 aa5.78□□□□□ -1.48
SF3B1-207ENST00000468925 IVLP07476 585 aa5.78□□□□□ -1.48
SF3B1-207ENST00000468925 SKIP12755 728 aa5.78□□□□□ -1.48
SF3B1-207ENST00000468925 CASQ1P31415 396 aa5.78□□□□□ -1.48
SF3B1-207ENST00000468925 CYP2C19P33261 490 aa5.78□□□□□ -1.48
SF3B1-207ENST00000468925 PSME1Q06323 249 aa5.78□□□□□ -1.48
SF3B1-207ENST00000468925 ARSJQ5FYB0 599 aaPredicted RBP5.78□□□□□ -1.48
SF3B1-207ENST00000468925 C20orf194Q5TEA3 1177 aa5.78□□□□□ -1.48
SF3B1-207ENST00000468925 TICAM2Q86XR7 235 aa5.78□□□□□ -1.48
SF3B1-207ENST00000468925 DEPDC4Q8N2C3 294 aa5.78□□□□□ -1.48
SF3B1-207ENST00000468925 EDARADDQ8WWZ3 215 aa5.78□□□□□ -1.48
SF3B1-207ENST00000468925 SIRT1Q96EB6 747 aa5.78□□□□□ -1.48
SF3B1-207ENST00000468925 SPATA32Q96LK8 384 aa5.78□□□□□ -1.48
SF3B1-207ENST00000468925 CFHR5Q9BXR6 569 aa5.78□□□□□ -1.48
SF3B1-207ENST00000468925 KRTAP4-9Q9BYQ8 210 aa5.78□□□□□ -1.48
SF3B1-207ENST00000468925 KRTAP4-2Q9BYR5 136 aa5.78□□□□□ -1.48
SF3B1-207ENST00000468925 RBSNQ9H1K0 784 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms