RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 GRAPLQ8TC17 118 aaPredicted RBP22.85■■□□□ 1.25
SMC4-209ENST00000468653 ANKRD2Q9GZV1 360 aa22.85■■□□□ 1.25
SMC4-209ENST00000468653 CCDC171Q6TFL3 1326 aa22.84■■□□□ 1.25
SMC4-209ENST00000468653 MCMDC2Q4G0Z9 681 aa22.84■■□□□ 1.25
SMC4-209ENST00000468653 STK32BQ9NY57 414 aa22.84■■□□□ 1.25
SMC4-209ENST00000468653 PALD1Q9ULE6 856 aa22.84■■□□□ 1.25
SMC4-209ENST00000468653 MED23Q9ULK4 1368 aa22.84■■□□□ 1.25
SMC4-209ENST00000468653 RNF113AO15541 343 aaKnown RBP22.84■■□□□ 1.25
SMC4-209ENST00000468653 TTF1Q15361 905 aaPredicted RBP22.84■■□□□ 1.25
SMC4-209ENST00000468653 CHGBP05060 677 aa22.83■■□□□ 1.24
SMC4-209ENST00000468653 BAG6P46379 1132 aa22.83■■□□□ 1.24
SMC4-209ENST00000468653 KCNJ4P48050 445 aa22.83■■□□□ 1.24
SMC4-209ENST00000468653 BCAMP50895 628 aa22.83■■□□□ 1.24
SMC4-209ENST00000468653 CRY2Q49AN0 593 aa22.83■■□□□ 1.24
SMC4-209ENST00000468653 ZNF589Q86UQ0 364 aaPredicted RBP22.83■■□□□ 1.24
SMC4-209ENST00000468653 HELLSQ9NRZ9 838 aa22.83■■□□□ 1.24
SMC4-209ENST00000468653 ZFYP08048 801 aaPredicted RBP22.82■■□□□ 1.24
SMC4-209ENST00000468653 SLC15A2Q16348 729 aa22.82■■□□□ 1.24
SMC4-209ENST00000468653 RBM17Q96I25 401 aaKnown RBP22.82■■□□□ 1.24
SMC4-209ENST00000468653 ZMYM1Q5SVZ6 1142 aa22.81■■□□□ 1.24
SMC4-209ENST00000468653 ANO8Q9HCE9 1232 aaPredicted RBP22.81■■□□□ 1.24
SMC4-209ENST00000468653 HMG20BQ9P0W2 317 aa22.81■■□□□ 1.24
SMC4-209ENST00000468653 ST18O60284 1047 aa22.81■■□□□ 1.24
SMC4-209ENST00000468653 SPATA5Q8NB90 893 aa22.81■■□□□ 1.24
SMC4-209ENST00000468653 MAP4K1Q92918 833 aa22.81■■□□□ 1.24
SMC4-209ENST00000468653 SEC62Q99442 399 aaKnown RBP22.81■■□□□ 1.24
SMC4-209ENST00000468653 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.81■■□□□ 1.24
SMC4-209ENST00000468653 PARP3Q9Y6F1 533 aa22.81■■□□□ 1.24
SMC4-209ENST00000468653 CYP2E1P05181 493 aaPredicted RBP22.8■■□□□ 1.24
SMC4-209ENST00000468653 MMP10P09238 476 aa22.8■■□□□ 1.24
SMC4-209ENST00000468653 RASGRF1Q13972 1273 aa22.8■■□□□ 1.24
SMC4-209ENST00000468653 CAVIN4Q5BKX8 364 aa22.8■■□□□ 1.24
SMC4-209ENST00000468653 IL17RAQ96F46 866 aa22.8■■□□□ 1.24
SMC4-209ENST00000468653 GNL3LQ9NVN8 582 aaKnown RBP22.8■■□□□ 1.24
SMC4-209ENST00000468653 RBM8AQ9Y5S9 174 aaKnown RBP22.8■■□□□ 1.24
SMC4-209ENST00000468653 AKAP11Q9UKA4 1901 aa22.79■■□□□ 1.24
SMC4-209ENST00000468653 CD2BP2O95400 341 aaKnown RBP22.79■■□□□ 1.24
SMC4-209ENST00000468653 SLFNL1Q499Z3 407 aa22.79■■□□□ 1.24
SMC4-209ENST00000468653 MSL1Q68DK7 614 aa22.79■■□□□ 1.24
SMC4-209ENST00000468653 ZSCAN25Q6NSZ9 544 aa22.79■■□□□ 1.24
SMC4-209ENST00000468653 CCDC129Q6ZRS4 1044 aa22.79■■□□□ 1.24
SMC4-209ENST00000468653 PRPF40BQ6NWY9 871 aaKnown RBP22.78■■□□□ 1.24
SMC4-209ENST00000468653 SNX14Q9Y5W7 946 aa22.78■■□□□ 1.24
SMC4-209ENST00000468653 A0A1B0GUL6 1792 aa22.78■■□□□ 1.24
SMC4-209ENST00000468653 WTIPA6NIX2 430 aaPredicted RBP22.78■■□□□ 1.24
SMC4-209ENST00000468653 GYG1P46976 350 aa22.78■■□□□ 1.24
SMC4-209ENST00000468653 WASHC4Q2M389 1173 aa22.78■■□□□ 1.24
SMC4-209ENST00000468653 VPS37DQ86XT2 251 aa22.78■■□□□ 1.24
SMC4-209ENST00000468653 BRIP1Q9BX63 1249 aa22.78■■□□□ 1.24
SMC4-209ENST00000468653 PIH1D3Q9NQM4 214 aaKnown RBP22.78■■□□□ 1.24
SMC4-209ENST00000468653 K7ELQ4 463 aaPredicted RBP22.77■■□□□ 1.24
SMC4-209ENST00000468653 NEK4P51957 841 aa22.77■■□□□ 1.24
SMC4-209ENST00000468653 NECTIN1Q15223 517 aa22.77■■□□□ 1.24
SMC4-209ENST00000468653 DEFB132Q7Z7B7 95 aa22.77■■□□□ 1.24
SMC4-209ENST00000468653 KLRG2A4D1S0 409 aaPredicted RBP22.76■■□□□ 1.23
SMC4-209ENST00000468653 IDH1O75874 414 aaKnown RBP22.76■■□□□ 1.23
SMC4-209ENST00000468653 ZKSCAN1P17029 563 aaPredicted RBP22.76■■□□□ 1.23
SMC4-209ENST00000468653 ANKIB1Q9P2G1 1089 aa22.76■■□□□ 1.23
SMC4-209ENST00000468653 ZNF804BA4D1E1 1349 aa22.76■■□□□ 1.23
SMC4-209ENST00000468653 HOXA10P31260 410 aaPredicted RBP22.76■■□□□ 1.23
SMC4-209ENST00000468653 RNF20Q5VTR2 975 aa22.76■■□□□ 1.23
SMC4-209ENST00000468653 CREB3L3Q68CJ9 461 aa22.76■■□□□ 1.23
SMC4-209ENST00000468653 RASEFQ8IZ41 740 aa22.76■■□□□ 1.23
SMC4-209ENST00000468653 SPRYD3Q8NCJ5 442 aa22.76■■□□□ 1.23
SMC4-209ENST00000468653 APPBP2Q92624 585 aa22.76■■□□□ 1.23
SMC4-209ENST00000468653 CRAMP1Q96RY5 1269 aa22.76■■□□□ 1.23
SMC4-209ENST00000468653 MAST3O60307 1309 aa22.75■■□□□ 1.23
SMC4-209ENST00000468653 BBOX1O75936 387 aa22.75■■□□□ 1.23
SMC4-209ENST00000468653 SLC9C2Q5TAH2 1124 aa22.75■■□□□ 1.23
SMC4-209ENST00000468653 OSBP2Q969R2 916 aa22.75■■□□□ 1.23
SMC4-209ENST00000468653 FAM84BQ96KN1 310 aaPredicted RBP22.75■■□□□ 1.23
SMC4-209ENST00000468653 KCNB2Q92953 911 aa22.74■■□□□ 1.23
SMC4-209ENST00000468653 IQSEC3Q9UPP2 1182 aaPredicted RBP22.74■■□□□ 1.23
SMC4-209ENST00000468653 U3KPZ7 1027 aaPredicted RBP22.74■■□□□ 1.23
SMC4-209ENST00000468653 M0R2C6 588 aa22.73■■□□□ 1.23
SMC4-209ENST00000468653 ADD2P35612 726 aa22.73■■□□□ 1.23
SMC4-209ENST00000468653 SLKQ9H2G2 1235 aaPredicted RBP22.73■■□□□ 1.23
SMC4-209ENST00000468653 LEMD3Q9Y2U8 911 aa22.73■■□□□ 1.23
SMC4-209ENST00000468653 XDHP47989 1333 aa22.73■■□□□ 1.23
SMC4-209ENST00000468653 SLC27A2O14975 620 aa22.73■■□□□ 1.23
SMC4-209ENST00000468653 PDE6BP35913 854 aa22.73■■□□□ 1.23
SMC4-209ENST00000468653 MAP3K12Q12852 859 aa22.73■■□□□ 1.23
SMC4-209ENST00000468653 FBXO33Q7Z6M2 555 aa22.73■■□□□ 1.23
SMC4-209ENST00000468653 IL27Q8NEV9 243 aa22.73■■□□□ 1.23
SMC4-209ENST00000468653 UPF3BQ9BZI7 483 aaKnown RBP22.73■■□□□ 1.23
SMC4-209ENST00000468653 NRXN2Q9P2S2 1712 aa22.72■■□□□ 1.23
SMC4-209ENST00000468653 HSP90AA1P07900 732 aaKnown RBP22.72■■□□□ 1.23
SMC4-209ENST00000468653 KLRK1P26718 216 aa22.72■■□□□ 1.23
SMC4-209ENST00000468653 HIBADHP31937 336 aaKnown RBP22.72■■□□□ 1.23
SMC4-209ENST00000468653 DSCC1Q9BVC3 393 aa22.72■■□□□ 1.23
SMC4-209ENST00000468653 FRAT2O75474 233 aaPredicted RBP22.71■■□□□ 1.23
SMC4-209ENST00000468653 UBE3CQ15386 1083 aa22.71■■□□□ 1.23
SMC4-209ENST00000468653 DENND2AQ9ULE3 1009 aa22.71■■□□□ 1.23
SMC4-209ENST00000468653 PDE6AP16499 860 aa22.71■■□□□ 1.23
SMC4-209ENST00000468653 MCM2P49736 904 aa22.71■■□□□ 1.23
SMC4-209ENST00000468653 ZNF532Q9HCE3 1301 aa22.7■■□□□ 1.22
SMC4-209ENST00000468653 MYH7P12883 1935 aa22.7■■□□□ 1.22
SMC4-209ENST00000468653 SEMA3EO15041 775 aa22.7■■□□□ 1.22
SMC4-209ENST00000468653 SRGNP10124 158 aa22.7■■□□□ 1.22
SMC4-209ENST00000468653 NPR1P16066 1061 aa22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms