RNA–Protein interactions for RNA: ENST00000468214.1

PCOLCE-204, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 4

Gene PCOLCE, Length 541 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-204ENST00000468214 HDAC5Q9UQL6 1122 aa18.5■□□□□ 0.55
PCOLCE-204ENST00000468214 COG6Q9Y2V7 657 aa18.5■□□□□ 0.55
PCOLCE-204ENST00000468214 LRRFIP2Q9Y608 721 aaKnown RBP18.5■□□□□ 0.55
PCOLCE-204ENST00000468214 MED23Q9ULK4 1368 aa18.5■□□□□ 0.55
PCOLCE-204ENST00000468214 RPS12P25398 132 aaKnown RBP18.49■□□□□ 0.55
PCOLCE-204ENST00000468214 DPF2Q92785 391 aa18.49■□□□□ 0.55
PCOLCE-204ENST00000468214 LEMD3Q9Y2U8 911 aa18.49■□□□□ 0.55
PCOLCE-204ENST00000468214 SCN9AQ15858 1988 aa18.49■□□□□ 0.55
PCOLCE-204ENST00000468214 WTIPA6NIX2 430 aaPredicted RBP18.48■□□□□ 0.55
PCOLCE-204ENST00000468214 CHRNDQ07001 517 aa18.48■□□□□ 0.55
PCOLCE-204ENST00000468214 ANKRD44Q8N8A2 993 aa18.48■□□□□ 0.55
PCOLCE-204ENST00000468214 DDX19BQ9UMR2 479 aa18.48■□□□□ 0.55
PCOLCE-204ENST00000468214 ZNF804BA4D1E1 1349 aa18.48■□□□□ 0.55
PCOLCE-204ENST00000468214 SHTN1A0MZ66 631 aa18.47■□□□□ 0.55
PCOLCE-204ENST00000468214 TMEM88BA6NKF7 163 aa18.47■□□□□ 0.55
PCOLCE-204ENST00000468214 RABL6Q3YEC7 729 aaPredicted RBP18.47■□□□□ 0.55
PCOLCE-204ENST00000468214 PODNQ7Z5L7 613 aa18.47■□□□□ 0.55
PCOLCE-204ENST00000468214 TRPM4Q8TD43 1214 aa18.47■□□□□ 0.55
PCOLCE-204ENST00000468214 ZBTB7BO15156 539 aaPredicted RBP18.46■□□□□ 0.55
PCOLCE-204ENST00000468214 GNAI2P04899 355 aa18.46■□□□□ 0.55
PCOLCE-204ENST00000468214 VIL1P09327 827 aaKnown RBP18.46■□□□□ 0.55
PCOLCE-204ENST00000468214 LDHAL6AQ6ZMR3 332 aa18.46■□□□□ 0.55
PCOLCE-204ENST00000468214 FBXW7Q969H0 707 aa18.46■□□□□ 0.55
PCOLCE-204ENST00000468214 ZNF594Q96JF6 807 aaPredicted RBP18.46■□□□□ 0.55
PCOLCE-204ENST00000468214 CNNM1Q9NRU3 951 aa18.46■□□□□ 0.55
PCOLCE-204ENST00000468214 SUPT16HQ9Y5B9 1047 aaKnown RBP18.46■□□□□ 0.55
PCOLCE-204ENST00000468214 USP17L3A6NCW0 530 aa18.45■□□□□ 0.54
PCOLCE-204ENST00000468214 USP17L4A6NCW7 530 aa18.45■□□□□ 0.54
PCOLCE-204ENST00000468214 TBC1D10BQ4KMP7 808 aaPredicted RBP18.45■□□□□ 0.54
PCOLCE-204ENST00000468214 RSBN1LQ6PCB5 846 aaPredicted RBP18.45■□□□□ 0.54
PCOLCE-204ENST00000468214 USP17L1Q7RTZ2 530 aa18.45■□□□□ 0.54
PCOLCE-204ENST00000468214 SAMD7Q7Z3H4 446 aa18.45■□□□□ 0.54
PCOLCE-204ENST00000468214 HELBQ8NG08 1087 aaPredicted RBP18.45■□□□□ 0.54
PCOLCE-204ENST00000468214 MKRN1Q9UHC7 482 aaKnown RBP18.45■□□□□ 0.54
PCOLCE-204ENST00000468214 TAF5LO75529 589 aa18.44■□□□□ 0.54
PCOLCE-204ENST00000468214 RBM26Q5T8P6 1007 aaKnown RBP18.44■□□□□ 0.54
PCOLCE-204ENST00000468214 ZC3H15Q8WU90 426 aaKnown RBP18.44■□□□□ 0.54
PCOLCE-204ENST00000468214 COA1Q9GZY4 146 aa18.44■□□□□ 0.54
PCOLCE-204ENST00000468214 CHMP4BQ9H444 224 aaKnown RBP18.44■□□□□ 0.54
PCOLCE-204ENST00000468214 C1orf115Q9H7X2 142 aa18.44■□□□□ 0.54
PCOLCE-204ENST00000468214 HIRAP54198 1017 aaPredicted RBP18.43■□□□□ 0.54
PCOLCE-204ENST00000468214 TXNRD3Q86VQ6 643 aa18.43■□□□□ 0.54
PCOLCE-204ENST00000468214 JMYQ8N9B5 988 aa18.43■□□□□ 0.54
PCOLCE-204ENST00000468214 AGBL3Q8NEM8 1001 aa18.43■□□□□ 0.54
PCOLCE-204ENST00000468214 ABT1Q9ULW3 272 aaKnown RBP18.43■□□□□ 0.54
PCOLCE-204ENST00000468214 PSME4Q14997 1843 aa18.43■□□□□ 0.54
PCOLCE-204ENST00000468214 TRAF5O00463 557 aa18.42■□□□□ 0.54
PCOLCE-204ENST00000468214 KLRK1P26718 216 aa18.42■□□□□ 0.54
PCOLCE-204ENST00000468214 FMR1Q06787 632 aaKnown RBP eCLIP18.42■□□□□ 0.54
PCOLCE-204ENST00000468214 KIF4BQ2VIQ3 1234 aa18.42■□□□□ 0.54
PCOLCE-204ENST00000468214 GLIS2Q9BZE0 524 aaPredicted RBP18.42■□□□□ 0.54
PCOLCE-204ENST00000468214 MYH13Q9UKX3 1938 aa18.42■□□□□ 0.54
PCOLCE-204ENST00000468214 SNAP23O00161 211 aa18.41■□□□□ 0.54
PCOLCE-204ENST00000468214 TRPM7Q96QT4 1865 aa18.41■□□□□ 0.54
PCOLCE-204ENST00000468214 CNTNAP1P78357 1384 aa18.41■□□□□ 0.54
PCOLCE-204ENST00000468214 EGFRP00533 1210 aa18.4■□□□□ 0.54
PCOLCE-204ENST00000468214 CENPBP07199 599 aaPredicted RBP18.4■□□□□ 0.54
PCOLCE-204ENST00000468214 USP17L8P0C7I0 530 aa18.4■□□□□ 0.54
PCOLCE-204ENST00000468214 CDC37L1Q7L3B6 337 aa18.4■□□□□ 0.54
PCOLCE-204ENST00000468214 ZBTB40Q9NUA8 1239 aa18.4■□□□□ 0.54
PCOLCE-204ENST00000468214 PGAP2Q9UHJ9 254 aa18.4■□□□□ 0.54
PCOLCE-204ENST00000468214 ZNF609O15014 1411 aa18.4■□□□□ 0.54
PCOLCE-204ENST00000468214 SRGAP3O43295 1099 aa18.39■□□□□ 0.53
PCOLCE-204ENST00000468214 MTX1Q13505 466 aa18.39■□□□□ 0.53
PCOLCE-204ENST00000468214 STRIP1Q5VSL9 837 aa18.39■□□□□ 0.53
PCOLCE-204ENST00000468214 ZNF804AQ7Z570 1209 aa18.39■□□□□ 0.53
PCOLCE-204ENST00000468214 DCPSQ96C86 337 aaKnown RBP18.39■□□□□ 0.53
PCOLCE-204ENST00000468214 CRBNQ96SW2 442 aa18.39■□□□□ 0.53
PCOLCE-204ENST00000468214 ZNF408Q9H9D4 720 aa18.39■□□□□ 0.53
PCOLCE-204ENST00000468214 MYO3BQ8WXR4 1341 aa18.39■□□□□ 0.53
PCOLCE-204ENST00000468214 ARAP2Q8WZ64 1704 aa18.38■□□□□ 0.53
PCOLCE-204ENST00000468214 CELF2O95319 508 aaKnown RBP18.38■□□□□ 0.53
PCOLCE-204ENST00000468214 DACT2Q5SW24 774 aa18.38■□□□□ 0.53
PCOLCE-204ENST00000468214 TTLL5Q6EMB2 1281 aa18.38■□□□□ 0.53
PCOLCE-204ENST00000468214 KRT26Q7Z3Y9 468 aa18.38■□□□□ 0.53
PCOLCE-204ENST00000468214 USP48Q86UV5 1035 aa18.38■□□□□ 0.53
PCOLCE-204ENST00000468214 KLHDC4Q8TBB5 520 aa18.38■□□□□ 0.53
PCOLCE-204ENST00000468214 GMLQ99445 158 aa18.38■□□□□ 0.53
PCOLCE-204ENST00000468214 MXD3Q9BW11 206 aa18.38■□□□□ 0.53
PCOLCE-204ENST00000468214 PUS3Q9BZE2 481 aaKnown RBP18.38■□□□□ 0.53
PCOLCE-204ENST00000468214 CD209Q9NNX6 404 aa18.38■□□□□ 0.53
PCOLCE-204ENST00000468214 RFX5P48382 616 aaPredicted RBP18.37■□□□□ 0.53
PCOLCE-204ENST00000468214 ZNF280AP59817 542 aaPredicted RBP18.37■□□□□ 0.53
PCOLCE-204ENST00000468214 GTF2IP78347 998 aa18.37■□□□□ 0.53
PCOLCE-204ENST00000468214 DEFB115Q30KQ5 88 aa18.37■□□□□ 0.53
PCOLCE-204ENST00000468214 C15orf52Q6ZUT6 534 aaKnown RBP18.37■□□□□ 0.53
PCOLCE-204ENST00000468214 PAXIP1Q6ZW49 1069 aaPredicted RBP18.37■□□□□ 0.53
PCOLCE-204ENST00000468214 OGFOD1Q8N543 542 aa18.37■□□□□ 0.53
PCOLCE-204ENST00000468214 MYOZ2Q9NPC6 264 aa18.37■□□□□ 0.53
PCOLCE-204ENST00000468214 GGA3Q9NZ52 723 aa18.37■□□□□ 0.53
PCOLCE-204ENST00000468214 POLR2AP24928 1970 aaKnown RBP18.37■□□□□ 0.53
PCOLCE-204ENST00000468214 PNMA6EA0A0J9YXQ4 647 aa18.36■□□□□ 0.53
PCOLCE-204ENST00000468214 METTL24Q5JXM2 366 aa18.36■□□□□ 0.53
PCOLCE-204ENST00000468214 CST9Q5W186 159 aa18.36■□□□□ 0.53
PCOLCE-204ENST00000468214 CEP85Q6P2H3 762 aa18.36■□□□□ 0.53
PCOLCE-204ENST00000468214 MROH5Q6ZUA9 1318 aa18.36■□□□□ 0.53
PCOLCE-204ENST00000468214 RASSF10A6NK89 507 aa18.35■□□□□ 0.53
PCOLCE-204ENST00000468214 VEGFBP49765 207 aa18.35■□□□□ 0.53
PCOLCE-204ENST00000468214 ATP8B2P98198 1209 aa18.35■□□□□ 0.53
PCOLCE-204ENST00000468214 PTPN12Q05209 780 aaKnown RBP18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms