RNA–Protein interactions for RNA: ENST00000467838.2

SEC16A-208, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

TSL 2

Gene SEC16A, Length 1,988 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-208ENST00000467838 CCAR1Q8IX12 1150 aaKnown RBP17.02■□□□□ 0.31
SEC16A-208ENST00000467838 FBXL16Q8N461 479 aa17.02■□□□□ 0.31
SEC16A-208ENST00000467838 DDX11Q96FC9 970 aa17.02■□□□□ 0.31
SEC16A-208ENST00000467838 SEC62Q99442 399 aaKnown RBP17.02■□□□□ 0.31
SEC16A-208ENST00000467838 SPATA31A3Q5VYP0 1347 aa17.01■□□□□ 0.31
SEC16A-208ENST00000467838 NUP188Q5SRE5 1749 aa17.01■□□□□ 0.31
SEC16A-208ENST00000467838 DHX40Q8IX18 779 aaKnown RBP17.01■□□□□ 0.31
SEC16A-208ENST00000467838 ZNF396Q96N95 335 aaPredicted RBP17.01■□□□□ 0.31
SEC16A-208ENST00000467838 GPR108Q9NPR9 543 aa17.01■□□□□ 0.31
SEC16A-208ENST00000467838 CCDC73Q6ZRK6 1079 aa17■□□□□ 0.31
SEC16A-208ENST00000467838 ANO10Q9NW15 660 aa17■□□□□ 0.31
SEC16A-208ENST00000467838 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17■□□□□ 0.31
SEC16A-208ENST00000467838 CHGBP05060 677 aa17■□□□□ 0.31
SEC16A-208ENST00000467838 MYL6BP14649 208 aa17■□□□□ 0.31
SEC16A-208ENST00000467838 SLC39A6Q13433 755 aa17■□□□□ 0.31
SEC16A-208ENST00000467838 CCDC112Q8NEF3 446 aa17■□□□□ 0.31
SEC16A-208ENST00000467838 CHMP4CQ96CF2 233 aa17■□□□□ 0.31
SEC16A-208ENST00000467838 USP28Q96RU2 1077 aa17■□□□□ 0.31
SEC16A-208ENST00000467838 DNAJC2Q99543 621 aaKnown RBP17■□□□□ 0.31
SEC16A-208ENST00000467838 CGNQ9P2M7 1197 aaKnown RBP17■□□□□ 0.31
SEC16A-208ENST00000467838 MEGF6O75095 1541 aa17■□□□□ 0.31
SEC16A-208ENST00000467838 COL18A1P39060 1754 aa17■□□□□ 0.31
SEC16A-208ENST00000467838 PHKG2P15735 406 aa16.99■□□□□ 0.31
SEC16A-208ENST00000467838 U2AF2P26368 475 aaKnown RBP eCLIP16.99■□□□□ 0.31
SEC16A-208ENST00000467838 EVCP57679 992 aa16.99■□□□□ 0.31
SEC16A-208ENST00000467838 TPD52L1Q16890 204 aaPredicted RBP16.99■□□□□ 0.31
SEC16A-208ENST00000467838 ZMYM1Q5SVZ6 1142 aa16.99■□□□□ 0.31
SEC16A-208ENST00000467838 ILDR1Q86SU0 546 aaPredicted RBP16.99■□□□□ 0.31
SEC16A-208ENST00000467838 ZNF496Q96IT1 587 aaPredicted RBP16.99■□□□□ 0.31
SEC16A-208ENST00000467838 CTNNA3Q9UI47 895 aa16.99■□□□□ 0.31
SEC16A-208ENST00000467838 SOS2Q07890 1332 aaPredicted RBP16.99■□□□□ 0.31
SEC16A-208ENST00000467838 KINO60870 393 aaKnown RBP16.98■□□□□ 0.31
SEC16A-208ENST00000467838 CCZ1BP86790 482 aa16.98■□□□□ 0.31
SEC16A-208ENST00000467838 CCZ1P86791 482 aaPredicted RBP16.98■□□□□ 0.31
SEC16A-208ENST00000467838 DDX46Q7L014 1031 aaKnown RBP16.98■□□□□ 0.31
SEC16A-208ENST00000467838 UBE3BQ7Z3V4 1068 aa16.98■□□□□ 0.31
SEC16A-208ENST00000467838 ZNF274Q96GC6 653 aaPredicted RBP16.98■□□□□ 0.31
SEC16A-208ENST00000467838 OGFRQ9NZT2 677 aa16.98■□□□□ 0.31
SEC16A-208ENST00000467838 NDUFB9Q9Y6M9 179 aa16.98■□□□□ 0.31
SEC16A-208ENST00000467838 A0A1W2PQ27 194 aa16.98■□□□□ 0.31
SEC16A-208ENST00000467838 A0A1W2PQ64 194 aa16.98■□□□□ 0.31
SEC16A-208ENST00000467838 A0A1W2PQD8 194 aa16.98■□□□□ 0.31
SEC16A-208ENST00000467838 SNRPA1P09661 255 aaKnown RBP16.98■□□□□ 0.31
SEC16A-208ENST00000467838 CEP135Q66GS9 1140 aa16.98■□□□□ 0.31
SEC16A-208ENST00000467838 CEP57L1Q8IYX8 460 aa16.98■□□□□ 0.31
SEC16A-208ENST00000467838 LRRC2Q9BYS8 371 aa16.98■□□□□ 0.31
SEC16A-208ENST00000467838 FTOQ9C0B1 505 aaKnown RBP eCLIP16.98■□□□□ 0.31
SEC16A-208ENST00000467838 CARMIL3Q8ND23 1372 aa16.98■□□□□ 0.31
SEC16A-208ENST00000467838 KIF20AO95235 890 aa16.97■□□□□ 0.31
SEC16A-208ENST00000467838 APOBRQ0VD83 1088 aa16.97■□□□□ 0.31
SEC16A-208ENST00000467838 OSBPL5Q9H0X9 879 aaPredicted RBP16.97■□□□□ 0.31
SEC16A-208ENST00000467838 NHSL1Q5SYE7 1610 aa16.97■□□□□ 0.31
SEC16A-208ENST00000467838 FMR1NBQ8N0W7 255 aaPredicted RBP16.97■□□□□ 0.31
SEC16A-208ENST00000467838 CABLES1Q8TDN4 633 aa16.97■□□□□ 0.31
SEC16A-208ENST00000467838 BPIFA3Q9BQP9 254 aa16.97■□□□□ 0.31
SEC16A-208ENST00000467838 PAG1Q9NWQ8 432 aa16.97■□□□□ 0.31
SEC16A-208ENST00000467838 RTEL1Q9NZ71 1219 aa16.97■□□□□ 0.31
SEC16A-208ENST00000467838 NWD2Q9ULI1 1742 aa16.96■□□□□ 0.31
SEC16A-208ENST00000467838 E7EWF7 191 aa16.96■□□□□ 0.31
SEC16A-208ENST00000467838 PDIA3P30101 505 aaKnown RBP16.96■□□□□ 0.31
SEC16A-208ENST00000467838 GSDMDP57764 484 aa16.96■□□□□ 0.31
SEC16A-208ENST00000467838 ZC3H6P61129 1189 aaKnown RBP16.96■□□□□ 0.31
SEC16A-208ENST00000467838 FGD1P98174 961 aa16.96■□□□□ 0.31
SEC16A-208ENST00000467838 ATG9AQ7Z3C6 839 aa16.96■□□□□ 0.31
SEC16A-208ENST00000467838 FSIP1Q8NA03 581 aa16.96■□□□□ 0.31
SEC16A-208ENST00000467838 RAPGEF4Q8WZA2 1011 aa16.96■□□□□ 0.31
SEC16A-208ENST00000467838 NEDD4P46934 1319 aa16.96■□□□□ 0.31
SEC16A-208ENST00000467838 CCDC69A6NI79 296 aa16.95■□□□□ 0.3
SEC16A-208ENST00000467838 BECN2A8MW95 431 aa16.95■□□□□ 0.3
SEC16A-208ENST00000467838 SKILP12757 684 aa16.95■□□□□ 0.3
SEC16A-208ENST00000467838 FOXO4P98177 505 aa16.95■□□□□ 0.3
SEC16A-208ENST00000467838 CEBPZQ03701 1054 aaKnown RBP16.95■□□□□ 0.3
SEC16A-208ENST00000467838 NFATC2IPQ8NCF5 419 aa16.95■□□□□ 0.3
SEC16A-208ENST00000467838 PLBD2Q8NHP8 589 aa16.95■□□□□ 0.3
SEC16A-208ENST00000467838 MRPS27Q92552 414 aaKnown RBP16.95■□□□□ 0.3
SEC16A-208ENST00000467838 NAT10Q9H0A0 1025 aaKnown RBP16.95■□□□□ 0.3
SEC16A-208ENST00000467838 IMPACTQ9P2X3 320 aa16.95■□□□□ 0.3
SEC16A-208ENST00000467838 DDX41Q9UJV9 622 aaKnown RBP16.95■□□□□ 0.3
SEC16A-208ENST00000467838 MAST3O60307 1309 aa16.95■□□□□ 0.3
SEC16A-208ENST00000467838 A0A087WZG4 1122 aa16.95■□□□□ 0.3
SEC16A-208ENST00000467838 USP27XA6NNY8 438 aa16.95■□□□□ 0.3
SEC16A-208ENST00000467838 KIF2AO00139 706 aaPredicted RBP16.95■□□□□ 0.3
SEC16A-208ENST00000467838 HSPD1P10809 573 aaKnown RBP16.95■□□□□ 0.3
SEC16A-208ENST00000467838 KCNJ6P48051 423 aa16.95■□□□□ 0.3
SEC16A-208ENST00000467838 ARID5BQ14865 1188 aa16.95■□□□□ 0.3
SEC16A-208ENST00000467838 ADALQ6DHV7 355 aa16.95■□□□□ 0.3
SEC16A-208ENST00000467838 RGS22Q8NE09 1264 aa16.95■□□□□ 0.3
SEC16A-208ENST00000467838 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.95■□□□□ 0.3
SEC16A-208ENST00000467838 USP16Q9Y5T5 823 aa16.95■□□□□ 0.3
SEC16A-208ENST00000467838 SPDYE4A6NLX3 237 aa16.94■□□□□ 0.3
SEC16A-208ENST00000467838 H7C1W4 665 aa16.94■□□□□ 0.3
SEC16A-208ENST00000467838 CCAR2Q8N163 923 aaKnown RBP16.94■□□□□ 0.3
SEC16A-208ENST00000467838 FMNL2Q96PY5 1086 aa16.94■□□□□ 0.3
SEC16A-208ENST00000467838 UBR2Q8IWV8 1755 aa16.94■□□□□ 0.3
SEC16A-208ENST00000467838 FDPSP14324 419 aaKnown RBP16.93■□□□□ 0.3
SEC16A-208ENST00000467838 TATP17735 454 aaPredicted RBP16.93■□□□□ 0.3
SEC16A-208ENST00000467838 PTPN14Q15678 1187 aa16.93■□□□□ 0.3
SEC16A-208ENST00000467838 SLFNL1Q499Z3 407 aa16.93■□□□□ 0.3
SEC16A-208ENST00000467838 NBPF11Q86T75 865 aa16.93■□□□□ 0.3
SEC16A-208ENST00000467838 IFNL2Q8IZJ0 200 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms