RNA–Protein interactions for RNA: ENST00000467366.1

PTPRE-206, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3

Gene PTPRE, Length 338 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-206ENST00000467366 ARMC9Q7Z3E5 817 aa8.54□□□□□ -1.04
PTPRE-206ENST00000467366 AGBL3Q8NEM8 1001 aa8.54□□□□□ -1.04
PTPRE-206ENST00000467366 CNKSR2Q8WXI2 1034 aa8.54□□□□□ -1.04
PTPRE-206ENST00000467366 WNK4Q96J92 1243 aa8.54□□□□□ -1.04
PTPRE-206ENST00000467366 PTPN18Q99952 460 aa8.54□□□□□ -1.04
PTPRE-206ENST00000467366 HTATIP2Q9BUP3 242 aa8.54□□□□□ -1.04
PTPRE-206ENST00000467366 UTP14AQ9BVJ6 771 aaKnown RBP8.54□□□□□ -1.04
PTPRE-206ENST00000467366 CHMP4AQ9BY43 222 aa8.54□□□□□ -1.04
PTPRE-206ENST00000467366 ANGEL1Q9UNK9 670 aaKnown RBP8.54□□□□□ -1.04
PTPRE-206ENST00000467366 NR2E3Q9Y5X4 410 aa8.54□□□□□ -1.04
PTPRE-206ENST00000467366 ALPK3Q96L96 1907 aa8.53□□□□□ -1.04
PTPRE-206ENST00000467366 USP17L8P0C7I0 530 aa8.53□□□□□ -1.04
PTPRE-206ENST00000467366 ZBTB48P10074 688 aaPredicted RBP8.53□□□□□ -1.04
PTPRE-206ENST00000467366 TMC4Q7Z404 712 aa8.53□□□□□ -1.04
PTPRE-206ENST00000467366 CELF1Q92879 486 aaKnown RBP8.53□□□□□ -1.04
PTPRE-206ENST00000467366 SLC10A4Q96EP9 437 aa8.53□□□□□ -1.04
PTPRE-206ENST00000467366 CLMNQ96JQ2 1002 aa8.53□□□□□ -1.04
PTPRE-206ENST00000467366 EYA3Q99504 573 aa8.53□□□□□ -1.04
PTPRE-206ENST00000467366 GJA5P36382 358 aa8.52□□□□□ -1.05
PTPRE-206ENST00000467366 TMEM132AQ24JP5 1023 aa8.52□□□□□ -1.05
PTPRE-206ENST00000467366 MCM10Q7L590 875 aa8.52□□□□□ -1.05
PTPRE-206ENST00000467366 TBC1D16Q8TBP0 767 aa8.52□□□□□ -1.05
PTPRE-206ENST00000467366 PHACTR3Q96KR7 559 aa8.52□□□□□ -1.05
PTPRE-206ENST00000467366 COL3A1P02461 1466 aaPredicted RBP8.51□□□□□ -1.05
PTPRE-206ENST00000467366 WNT10BO00744 389 aa8.51□□□□□ -1.05
PTPRE-206ENST00000467366 U2SURPO15042 1029 aaKnown RBP8.51□□□□□ -1.05
PTPRE-206ENST00000467366 DCTN1Q14203 1278 aa8.51□□□□□ -1.05
PTPRE-206ENST00000467366 OTUD7BQ6GQQ9 843 aa8.51□□□□□ -1.05
PTPRE-206ENST00000467366 NECTIN2Q92692 538 aa8.51□□□□□ -1.05
PTPRE-206ENST00000467366 ZC3H12CQ9C0D7 883 aaKnown RBP8.51□□□□□ -1.05
PTPRE-206ENST00000467366 ARHGAP39Q9C0H5 1083 aa8.51□□□□□ -1.05
PTPRE-206ENST00000467366 MIS18AQ9NYP9 233 aa8.51□□□□□ -1.05
PTPRE-206ENST00000467366 BCCIPQ9P287 314 aaKnown RBP eCLIP8.51□□□□□ -1.05
PTPRE-206ENST00000467366 SSC5DA1L4H1 1573 aa8.51□□□□□ -1.05
PTPRE-206ENST00000467366 TESPA1A2RU30 521 aaPredicted RBP8.5□□□□□ -1.05
PTPRE-206ENST00000467366 G3V3G9 751 aa8.5□□□□□ -1.05
PTPRE-206ENST00000467366 EVI5O60447 810 aa8.5□□□□□ -1.05
PTPRE-206ENST00000467366 BMP8BP34820 402 aa8.5□□□□□ -1.05
PTPRE-206ENST00000467366 PLA2G5P39877 138 aa8.5□□□□□ -1.05
PTPRE-206ENST00000467366 GJA8P48165 433 aa8.5□□□□□ -1.05
PTPRE-206ENST00000467366 BCAMP50895 628 aa8.5□□□□□ -1.05
PTPRE-206ENST00000467366 ARHGEF6Q15052 776 aa8.5□□□□□ -1.05
PTPRE-206ENST00000467366 MAP3K11Q16584 847 aa8.5□□□□□ -1.05
PTPRE-206ENST00000467366 DCAF8Q5TAQ9 597 aa8.5□□□□□ -1.05
PTPRE-206ENST00000467366 ZNF428Q96B54 188 aa8.5□□□□□ -1.05
PTPRE-206ENST00000467366 GDF15Q99988 308 aa8.5□□□□□ -1.05
PTPRE-206ENST00000467366 OTOFQ9HC10 1997 aa8.5□□□□□ -1.05
PTPRE-206ENST00000467366 SASH1O94885 1247 aa8.49□□□□□ -1.05
PTPRE-206ENST00000467366 LRIT3Q3SXY7 679 aa8.49□□□□□ -1.05
PTPRE-206ENST00000467366 NLRP10Q86W26 655 aa8.49□□□□□ -1.05
PTPRE-206ENST00000467366 NKX2-3Q8TAU0 364 aa8.49□□□□□ -1.05
PTPRE-206ENST00000467366 THUMPD2Q9BTF0 503 aaKnown RBP8.49□□□□□ -1.05
PTPRE-206ENST00000467366 MXD3Q9BW11 206 aa8.49□□□□□ -1.05
PTPRE-206ENST00000467366 TRMT112Q9UI30 125 aaKnown RBP8.49□□□□□ -1.05
PTPRE-206ENST00000467366 EYSQ5T1H1 3165 aa8.49□□□□□ -1.05
PTPRE-206ENST00000467366 RPTORQ8N122 1335 aa8.49□□□□□ -1.05
PTPRE-206ENST00000467366 UFL1O94874 794 aa8.48□□□□□ -1.05
PTPRE-206ENST00000467366 FARP2O94887 1054 aaPredicted RBP8.48□□□□□ -1.05
PTPRE-206ENST00000467366 GJB1P08034 283 aa8.48□□□□□ -1.05
PTPRE-206ENST00000467366 CCL5P13501 91 aa8.48□□□□□ -1.05
PTPRE-206ENST00000467366 PLCB2Q00722 1185 aa8.48□□□□□ -1.05
PTPRE-206ENST00000467366 TAF1CQ15572 869 aaPredicted RBP8.48□□□□□ -1.05
PTPRE-206ENST00000467366 LRP10Q7Z4F1 713 aa8.48□□□□□ -1.05
PTPRE-206ENST00000467366 RTF1Q92541 710 aaKnown RBP8.48□□□□□ -1.05
PTPRE-206ENST00000467366 YTHDC1Q96MU7 727 aaKnown RBP8.48□□□□□ -1.05
PTPRE-206ENST00000467366 GUCD1Q96NT3 240 aa8.48□□□□□ -1.05
PTPRE-206ENST00000467366 SH3TC1Q8TE82 1336 aa8.48□□□□□ -1.05
PTPRE-206ENST00000467366 USP17L3A6NCW0 530 aa8.47□□□□□ -1.05
PTPRE-206ENST00000467366 USP17L4A6NCW7 530 aa8.47□□□□□ -1.05
PTPRE-206ENST00000467366 ECM2O94769 699 aaPredicted RBP8.47□□□□□ -1.05
PTPRE-206ENST00000467366 PRKAR2BP31323 418 aa8.47□□□□□ -1.05
PTPRE-206ENST00000467366 TAF7Q15545 349 aaPredicted RBP8.47□□□□□ -1.05
PTPRE-206ENST00000467366 USP17L1Q7RTZ2 530 aa8.47□□□□□ -1.05
PTPRE-206ENST00000467366 APOBEC3FQ8IUX4 373 aaKnown RBP8.47□□□□□ -1.05
PTPRE-206ENST00000467366 MS4A4AQ96JQ5 239 aa8.47□□□□□ -1.05
PTPRE-206ENST00000467366 ZFYVE28Q9HCC9 887 aa8.47□□□□□ -1.05
PTPRE-206ENST00000467366 KNSTRNQ9Y448 316 aa8.47□□□□□ -1.05
PTPRE-206ENST00000467366 ECM29Q5VYK3 1845 aa8.47□□□□□ -1.05
PTPRE-206ENST00000467366 COL1A1P02452 1464 aaPredicted RBP8.46□□□□□ -1.05
PTPRE-206ENST00000467366 CTGFP29279 349 aa8.46□□□□□ -1.06
PTPRE-206ENST00000467366 HOXD11P31277 338 aaPredicted RBP8.46□□□□□ -1.06
PTPRE-206ENST00000467366 EIF4A1P60842 406 aaKnown RBP8.46□□□□□ -1.06
PTPRE-206ENST00000467366 LACTBP83111 547 aaPredicted RBP8.46□□□□□ -1.06
PTPRE-206ENST00000467366 SF3B3Q15393 1217 aaKnown RBP8.46□□□□□ -1.06
PTPRE-206ENST00000467366 FAM43AQ8N2R8 423 aa8.46□□□□□ -1.06
PTPRE-206ENST00000467366 U2AF1L4Q8WU68 220 aaKnown RBP8.46□□□□□ -1.06
PTPRE-206ENST00000467366 FAM122AQ96E09 287 aa8.46□□□□□ -1.06
PTPRE-206ENST00000467366 RSPH6AQ9H0K4 717 aa8.46□□□□□ -1.06
PTPRE-206ENST00000467366 RNF208Q9H0X6 261 aa8.46□□□□□ -1.06
PTPRE-206ENST00000467366 UNCXA6NJT0 531 aa8.45□□□□□ -1.06
PTPRE-206ENST00000467366 PPP1R12BO60237 982 aaPredicted RBP8.45□□□□□ -1.06
PTPRE-206ENST00000467366 USP2O75604 605 aaPredicted RBP8.45□□□□□ -1.06
PTPRE-206ENST00000467366 ANXA1P04083 346 aa8.45□□□□□ -1.06
PTPRE-206ENST00000467366 GRK4P32298 578 aa8.45□□□□□ -1.06
PTPRE-206ENST00000467366 RPS8P62241 208 aaKnown RBP8.45□□□□□ -1.06
PTPRE-206ENST00000467366 KIF22Q14807 665 aa8.45□□□□□ -1.06
PTPRE-206ENST00000467366 PDIA6Q15084 440 aa8.45□□□□□ -1.06
PTPRE-206ENST00000467366 DACT2Q5SW24 774 aa8.45□□□□□ -1.06
PTPRE-206ENST00000467366 TDHQ8IZJ6 230 aa8.45□□□□□ -1.06
PTPRE-206ENST00000467366 OGFOD1Q8N543 542 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms