RNA–Protein interactions for RNA: ENST00000466416.1

ABCF3-205, Transcript of ATP binding cassette subfamily F member 3, human

TSL 4

Gene ABCF3, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCF3-205	ENST00000466416	NFE2L2	Q16236	605 aa		12.08	□□□□□ -0.48
ABCF3-205	ENST00000466416	SLC9C1	Q4G0N8	1177 aa		12.08	□□□□□ -0.48
ABCF3-205	ENST00000466416	PLBD2	Q8NHP8	589 aa		12.08	□□□□□ -0.48
ABCF3-205	ENST00000466416	WNK4	Q96J92	1243 aa		12.08	□□□□□ -0.48
ABCF3-205	ENST00000466416	RBM27	Q9P2N5	1060 aa	Known RBP	12.08	□□□□□ -0.48
ABCF3-205	ENST00000466416	CUL9	Q8IWT3	2517 aa		12.07	□□□□□ -0.48
ABCF3-205	ENST00000466416	PPP1R12B	O60237	982 aa	Predicted RBP	12.07	□□□□□ -0.48
ABCF3-205	ENST00000466416	ATP2B4	P23634	1241 aa		12.07	□□□□□ -0.48
ABCF3-205	ENST00000466416	PPP2R1A	P30153	589 aa		12.07	□□□□□ -0.48
ABCF3-205	ENST00000466416	MNX1	P50219	401 aa	Predicted RBP	12.07	□□□□□ -0.48
ABCF3-205	ENST00000466416	TRIM28	Q13263	835 aa	Known RBP	12.07	□□□□□ -0.48
ABCF3-205	ENST00000466416	ANKRD13D	Q6ZTN6	518 aa		12.07	□□□□□ -0.48
ABCF3-205	ENST00000466416	XDH	P47989	1333 aa		12.07	□□□□□ -0.48
ABCF3-205	ENST00000466416	TESPA1	A2RU30	521 aa	Predicted RBP	12.06	□□□□□ -0.48
ABCF3-205	ENST00000466416	DACT2	Q5SW24	774 aa		12.06	□□□□□ -0.48
ABCF3-205	ENST00000466416	STRIP1	Q5VSL9	837 aa		12.06	□□□□□ -0.48
ABCF3-205	ENST00000466416	ZNF428	Q96B54	188 aa		12.06	□□□□□ -0.48
ABCF3-205	ENST00000466416	PLEKHF1	Q96S99	279 aa		12.06	□□□□□ -0.48
ABCF3-205	ENST00000466416	PNN	Q9H307	717 aa	Known RBP	12.06	□□□□□ -0.48
ABCF3-205	ENST00000466416	SEC31B	Q9NQW1	1179 aa		12.06	□□□□□ -0.48
ABCF3-205	ENST00000466416	CENPF	P49454	3210 aa		12.05	□□□□□ -0.48
ABCF3-205	ENST00000466416	ATP5J2-PTCD1	G3V325	749 aa		12.05	□□□□□ -0.48
ABCF3-205	ENST00000466416	CCDC152	Q4G0S7	254 aa		12.05	□□□□□ -0.48
ABCF3-205	ENST00000466416	RTL5	Q5HYW3	569 aa	Predicted RBP	12.05	□□□□□ -0.48
ABCF3-205	ENST00000466416	DPF3	Q92784	378 aa		12.05	□□□□□ -0.48
ABCF3-205	ENST00000466416	DEFB129	Q9H1M3	183 aa		12.05	□□□□□ -0.48
ABCF3-205	ENST00000466416	PTCH2	Q9Y6C5	1203 aa		12.05	□□□□□ -0.48
ABCF3-205	ENST00000466416	SASH1	O94885	1247 aa		12.04	□□□□□ -0.48
ABCF3-205	ENST00000466416	TRIM26	Q12899	539 aa	Predicted RBP	12.04	□□□□□ -0.48
ABCF3-205	ENST00000466416	SUPT20HL1	Q3ZLR7	823 aa		12.04	□□□□□ -0.48
ABCF3-205	ENST00000466416	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	12.04	□□□□□ -0.48
ABCF3-205	ENST00000466416	ZBED3	Q96IU2	234 aa	Predicted RBP	12.04	□□□□□ -0.48
ABCF3-205	ENST00000466416	CLMN	Q96JQ2	1002 aa		12.04	□□□□□ -0.48
ABCF3-205	ENST00000466416	PPP2R3B	Q9Y5P8	575 aa		12.04	□□□□□ -0.48
ABCF3-205	ENST00000466416	PSME4	Q14997	1843 aa		12.04	□□□□□ -0.48
ABCF3-205	ENST00000466416		A0A0C4DFX4	3053 aa		12.03	□□□□□ -0.48
ABCF3-205	ENST00000466416	COL1A1	P02452	1464 aa	Predicted RBP	12.03	□□□□□ -0.48
ABCF3-205	ENST00000466416	BRCA2	P51587	3418 aa		12.03	□□□□□ -0.48
ABCF3-205	ENST00000466416		A0A1W2PPC1	479 aa		12.03	□□□□□ -0.48
ABCF3-205	ENST00000466416	IREB2	P48200	963 aa	Known RBP	12.03	□□□□□ -0.48
ABCF3-205	ENST00000466416	CAP1	Q01518	475 aa		12.03	□□□□□ -0.48
ABCF3-205	ENST00000466416	ANKRD18A	Q8IVF6	992 aa		12.03	□□□□□ -0.48
ABCF3-205	ENST00000466416	PTPN18	Q99952	460 aa		12.03	□□□□□ -0.48
ABCF3-205	ENST00000466416	MXD3	Q9BW11	206 aa		12.03	□□□□□ -0.48
ABCF3-205	ENST00000466416	COA1	Q9GZY4	146 aa		12.03	□□□□□ -0.48
ABCF3-205	ENST00000466416	PRO3102	Q9H379	93 aa		12.03	□□□□□ -0.48
ABCF3-205	ENST00000466416	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	12.03	□□□□□ -0.48
ABCF3-205	ENST00000466416	FZD1	Q9UP38	647 aa		12.03	□□□□□ -0.48
ABCF3-205	ENST00000466416	FBXW7	Q969H0	707 aa		12.02	□□□□□ -0.49
ABCF3-205	ENST00000466416	HTATIP2	Q9BUP3	242 aa		12.02	□□□□□ -0.49
ABCF3-205	ENST00000466416	ZFYVE28	Q9HCC9	887 aa		12.02	□□□□□ -0.49
ABCF3-205	ENST00000466416	CHPF2	Q9P2E5	772 aa		12.02	□□□□□ -0.49
ABCF3-205	ENST00000466416	NR2E3	Q9Y5X4	410 aa		12.02	□□□□□ -0.49
ABCF3-205	ENST00000466416	COL4A1	P02462	1669 aa		12.02	□□□□□ -0.49
ABCF3-205	ENST00000466416	MAPK8IP3	Q9UPT6	1336 aa		12.02	□□□□□ -0.49
ABCF3-205	ENST00000466416	MED23	Q9ULK4	1368 aa		12.02	□□□□□ -0.49
ABCF3-205	ENST00000466416	WTIP	A6NIX2	430 aa	Predicted RBP	12.01	□□□□□ -0.49
ABCF3-205	ENST00000466416	PDE8A	O60658	829 aa		12.01	□□□□□ -0.49
ABCF3-205	ENST00000466416	GNRH1	P01148	92 aa		12.01	□□□□□ -0.49
ABCF3-205	ENST00000466416	GJA5	P36382	358 aa		12.01	□□□□□ -0.49
ABCF3-205	ENST00000466416	TTLL5	Q6EMB2	1281 aa		12.01	□□□□□ -0.49
ABCF3-205	ENST00000466416	ANKRD13A	Q8IZ07	590 aa		12.01	□□□□□ -0.49
ABCF3-205	ENST00000466416	NKX2-3	Q8TAU0	364 aa		12.01	□□□□□ -0.49
ABCF3-205	ENST00000466416	DBF4	Q9UBU7	674 aa	Predicted RBP	12.01	□□□□□ -0.49
ABCF3-205	ENST00000466416	DLG5	Q8TDM6	1919 aa		12.01	□□□□□ -0.49
ABCF3-205	ENST00000466416	USP2	O75604	605 aa	Predicted RBP	12	□□□□□ -0.49
ABCF3-205	ENST00000466416	WDHD1	O75717	1129 aa	Predicted RBP	12	□□□□□ -0.49
ABCF3-205	ENST00000466416	MYC	P01106	439 aa	Predicted RBP	12	□□□□□ -0.49
ABCF3-205	ENST00000466416	PRMT2	P55345	433 aa		12	□□□□□ -0.49
ABCF3-205	ENST00000466416	KIF22	Q14807	665 aa		12	□□□□□ -0.49
ABCF3-205	ENST00000466416	DLGAP5	Q15398	846 aa		12	□□□□□ -0.49
ABCF3-205	ENST00000466416	KIAA0825	Q8IV33	1275 aa		12	□□□□□ -0.49
ABCF3-205	ENST00000466416	MTMR14	Q8NCE2	650 aa		12	□□□□□ -0.49
ABCF3-205	ENST00000466416	CDC5L	Q99459	802 aa	Known RBP	12	□□□□□ -0.49
ABCF3-205	ENST00000466416	HYPK	Q9NX55	129 aa		12	□□□□□ -0.49
ABCF3-205	ENST00000466416	PCCA	P05165	728 aa	Predicted RBP	11.99	□□□□□ -0.49
ABCF3-205	ENST00000466416	HOXB7	P09629	217 aa		11.99	□□□□□ -0.49
ABCF3-205	ENST00000466416	CCT4	P50991	539 aa	Known RBP	11.99	□□□□□ -0.49
ABCF3-205	ENST00000466416	RIPK4	P57078	832 aa		11.99	□□□□□ -0.49
ABCF3-205	ENST00000466416	TAF1C	Q15572	869 aa	Predicted RBP	11.99	□□□□□ -0.49
ABCF3-205	ENST00000466416	HDGFL1	Q5TGJ6	251 aa		11.99	□□□□□ -0.49
ABCF3-205	ENST00000466416	SH3TC2	Q8TF17	1288 aa		11.99	□□□□□ -0.49
ABCF3-205	ENST00000466416	MS4A4A	Q96JQ5	239 aa		11.99	□□□□□ -0.49
ABCF3-205	ENST00000466416	PCGF6	Q9BYE7	350 aa		11.99	□□□□□ -0.49
ABCF3-205	ENST00000466416	BSDC1	Q9NW68	430 aa	Predicted RBP	11.99	□□□□□ -0.49
ABCF3-205	ENST00000466416	MINPP1	Q9UNW1	487 aa		11.99	□□□□□ -0.49
ABCF3-205	ENST00000466416	RANBP2	P49792	3224 aa	Known RBP	11.99	□□□□□ -0.49
ABCF3-205	ENST00000466416	ZNF804B	A4D1E1	1349 aa		11.98	□□□□□ -0.49
ABCF3-205	ENST00000466416	MYO1B	O43795	1136 aa		11.98	□□□□□ -0.49
ABCF3-205	ENST00000466416	GTF2A2	P52657	109 aa		11.98	□□□□□ -0.49
ABCF3-205	ENST00000466416	LMOD3	Q0VAK6	560 aa		11.98	□□□□□ -0.49
ABCF3-205	ENST00000466416	RIC3	Q7Z5B4	369 aa		11.98	□□□□□ -0.49
ABCF3-205	ENST00000466416	CCDC191	Q8NCU4	936 aa		11.98	□□□□□ -0.49
ABCF3-205	ENST00000466416	LEMD3	Q9Y2U8	911 aa		11.98	□□□□□ -0.49
ABCF3-205	ENST00000466416	CHL1	O00533	1208 aa		11.97	□□□□□ -0.49
ABCF3-205	ENST00000466416	ZBTB7B	O15156	539 aa	Predicted RBP	11.97	□□□□□ -0.49
ABCF3-205	ENST00000466416	GTF2I	P78347	998 aa		11.97	□□□□□ -0.49
ABCF3-205	ENST00000466416	NBPF12	Q5TAG4	269 aa	Predicted RBP	11.97	□□□□□ -0.49
ABCF3-205	ENST00000466416	GPR153	Q6NV75	609 aa		11.97	□□□□□ -0.49
ABCF3-205	ENST00000466416	UBE2Q1	Q7Z7E8	422 aa		11.97	□□□□□ -0.49

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