RNA–Protein interactions for RNA: ENST00000466373.1

UFD1-206, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 3,059 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-206ENST00000466373 HLFQ16534 295 aa12.28□□□□□ -0.44
UFD1-206ENST00000466373 DNTTIP2Q5QJE6 756 aaKnown RBP12.28□□□□□ -0.44
UFD1-206ENST00000466373 KIF6Q6ZMV9 814 aa12.28□□□□□ -0.44
UFD1-206ENST00000466373 SYTL4Q96C24 671 aaPredicted RBP12.28□□□□□ -0.44
UFD1-206ENST00000466373 SOS2Q07890 1332 aaPredicted RBP12.28□□□□□ -0.44
UFD1-206ENST00000466373 NUP188Q5SRE5 1749 aa12.27□□□□□ -0.44
UFD1-206ENST00000466373 PARP4Q9UKK3 1724 aaKnown RBP12.27□□□□□ -0.44
UFD1-206ENST00000466373 TPM2P07951 284 aa12.27□□□□□ -0.44
UFD1-206ENST00000466373 HMGB1P09429 215 aaKnown RBP12.27□□□□□ -0.44
UFD1-206ENST00000466373 PDIA4P13667 645 aaKnown RBP12.27□□□□□ -0.44
UFD1-206ENST00000466373 MRVI1Q9Y6F6 885 aa12.27□□□□□ -0.44
UFD1-206ENST00000466373 LAMA4Q16363 1823 aa12.27□□□□□ -0.45
UFD1-206ENST00000466373 CIAO1O76071 339 aa12.27□□□□□ -0.45
UFD1-206ENST00000466373 ZAP70P43403 619 aa12.27□□□□□ -0.45
UFD1-206ENST00000466373 EXOSC10Q01780 885 aaKnown RBP12.27□□□□□ -0.45
UFD1-206ENST00000466373 IFIT5Q13325 482 aaKnown RBP12.27□□□□□ -0.45
UFD1-206ENST00000466373 ANO6Q4KMQ2 910 aa12.27□□□□□ -0.45
UFD1-206ENST00000466373 RBM10P98175 930 aaKnown RBP12.26□□□□□ -0.45
UFD1-206ENST00000466373 HSP90AA2PQ14568 343 aaPredicted RBP12.26□□□□□ -0.45
UFD1-206ENST00000466373 A0A0G2JS52 829 aa12.26□□□□□ -0.45
UFD1-206ENST00000466373 SMARCC2Q8TAQ2 1214 aa12.26□□□□□ -0.45
UFD1-206ENST00000466373 PUS7LQ9H0K6 701 aaKnown RBP12.26□□□□□ -0.45
UFD1-206ENST00000466373 BTG4Q9NY30 223 aa12.26□□□□□ -0.45
UFD1-206ENST00000466373 XIRP1Q702N8 1843 aaKnown RBP12.26□□□□□ -0.45
UFD1-206ENST00000466373 UBR2Q8IWV8 1755 aa12.26□□□□□ -0.45
UFD1-206ENST00000466373 PLEKHG2Q9H7P9 1386 aa12.26□□□□□ -0.45
UFD1-206ENST00000466373 PDIA3P30101 505 aaKnown RBP12.26□□□□□ -0.45
UFD1-206ENST00000466373 METTL24Q5JXM2 366 aa12.26□□□□□ -0.45
UFD1-206ENST00000466373 FAM200AQ8TCP9 573 aa12.26□□□□□ -0.45
UFD1-206ENST00000466373 GREM2Q9H772 168 aa12.26□□□□□ -0.45
UFD1-206ENST00000466373 ATG3Q9NT62 314 aa12.26□□□□□ -0.45
UFD1-206ENST00000466373 OTUD7BQ6GQQ9 843 aa12.25□□□□□ -0.45
UFD1-206ENST00000466373 LDHAL6AQ6ZMR3 332 aa12.25□□□□□ -0.45
UFD1-206ENST00000466373 UQCRHLA0A096LP55 91 aa12.25□□□□□ -0.45
UFD1-206ENST00000466373 FOXP2O15409 715 aa12.25□□□□□ -0.45
UFD1-206ENST00000466373 STARD3NLO95772 234 aa12.25□□□□□ -0.45
UFD1-206ENST00000466373 FGAP02671 866 aa12.25□□□□□ -0.45
UFD1-206ENST00000466373 UQCRHP07919 91 aa12.25□□□□□ -0.45
UFD1-206ENST00000466373 AKAP2Q9Y2D5 859 aa12.25□□□□□ -0.45
UFD1-206ENST00000466373 A0A087WWV3 80 aa12.24□□□□□ -0.45
UFD1-206ENST00000466373 ITGA6P23229 1130 aa12.24□□□□□ -0.45
UFD1-206ENST00000466373 ZBTB38Q8NAP3 1195 aaPredicted RBP12.24□□□□□ -0.45
UFD1-206ENST00000466373 DNAJC25Q9H1X3 360 aa12.24□□□□□ -0.45
UFD1-206ENST00000466373 ZSCAN16Q9H4T2 348 aaPredicted RBP12.24□□□□□ -0.45
UFD1-206ENST00000466373 DDX19AQ9NUU7 478 aaKnown RBP12.24□□□□□ -0.45
UFD1-206ENST00000466373 CFAP45Q9UL16 551 aa12.24□□□□□ -0.45
UFD1-206ENST00000466373 PCCAP05165 728 aaPredicted RBP12.24□□□□□ -0.45
UFD1-206ENST00000466373 ATP2B3Q16720 1220 aa12.24□□□□□ -0.45
UFD1-206ENST00000466373 USP28Q96RU2 1077 aa12.24□□□□□ -0.45
UFD1-206ENST00000466373 LLPHQ9BRT6 129 aaKnown RBP12.24□□□□□ -0.45
UFD1-206ENST00000466373 CLSTN2Q9H4D0 955 aa12.24□□□□□ -0.45
UFD1-206ENST00000466373 CBX8Q9HC52 389 aa12.24□□□□□ -0.45
UFD1-206ENST00000466373 CNNM1Q9NRU3 951 aa12.24□□□□□ -0.45
UFD1-206ENST00000466373 TNS2Q63HR2 1409 aa12.24□□□□□ -0.45
UFD1-206ENST00000466373 ADD1P35611 737 aaKnown RBP12.24□□□□□ -0.45
UFD1-206ENST00000466373 GJB4Q9NTQ9 266 aa12.24□□□□□ -0.45
UFD1-206ENST00000466373 DENND2AQ9ULE3 1009 aa12.24□□□□□ -0.45
UFD1-206ENST00000466373 TBC1D2BQ9UPU7 963 aa12.24□□□□□ -0.45
UFD1-206ENST00000466373 FAM177BA6PVY3 158 aa12.23□□□□□ -0.45
UFD1-206ENST00000466373 NOLC1Q14978 699 aaKnown RBP eCLIP12.23□□□□□ -0.459e-7■■□□□ 13.8
UFD1-206ENST00000466373 IMMTQ16891 758 aaKnown RBP12.23□□□□□ -0.45
UFD1-206ENST00000466373 SASS6Q6UVJ0 657 aa12.23□□□□□ -0.45
UFD1-206ENST00000466373 HELBQ8NG08 1087 aaPredicted RBP12.23□□□□□ -0.45
UFD1-206ENST00000466373 ERCC4Q92889 916 aaPredicted RBP12.23□□□□□ -0.45
UFD1-206ENST00000466373 SLC4A9Q96Q91 983 aa12.23□□□□□ -0.45
UFD1-206ENST00000466373 MCAMP43121 646 aa12.23□□□□□ -0.45
UFD1-206ENST00000466373 HMGN5P82970 282 aaKnown RBP12.23□□□□□ -0.45
UFD1-206ENST00000466373 NLRP10Q86W26 655 aa12.23□□□□□ -0.45
UFD1-206ENST00000466373 TTLL11Q8NHH1 800 aa12.23□□□□□ -0.45
UFD1-206ENST00000466373 AGXT2Q9BYV1 514 aa12.23□□□□□ -0.45
UFD1-206ENST00000466373 FAM13BQ9NYF5 915 aa12.23□□□□□ -0.45
UFD1-206ENST00000466373 ZBTB1Q9Y2K1 713 aa12.23□□□□□ -0.45
UFD1-206ENST00000466373 SHANK3Q9BYB0 1731 aa12.23□□□□□ -0.45
UFD1-206ENST00000466373 MAP3K15Q6ZN16 1313 aa12.23□□□□□ -0.45
UFD1-206ENST00000466373 GPAA1O43292 621 aa12.22□□□□□ -0.45
UFD1-206ENST00000466373 GIGYF2Q6Y7W6 1299 aaKnown RBP12.22□□□□□ -0.45
UFD1-206ENST00000466373 CCAR1Q8IX12 1150 aaKnown RBP12.22□□□□□ -0.45
UFD1-206ENST00000466373 PIBF1Q8WXW3 757 aa12.22□□□□□ -0.45
UFD1-206ENST00000466373 FBXW7Q969H0 707 aa12.22□□□□□ -0.45
UFD1-206ENST00000466373 KCNF1Q9H3M0 494 aa12.22□□□□□ -0.45
UFD1-206ENST00000466373 TRMT112Q9UI30 125 aaKnown RBP12.22□□□□□ -0.45
UFD1-206ENST00000466373 TOGARAM1Q9Y4F4 1720 aa12.22□□□□□ -0.45
UFD1-206ENST00000466373 PRC1O43663 620 aa12.22□□□□□ -0.45
UFD1-206ENST00000466373 IDH1O75874 414 aaKnown RBP12.22□□□□□ -0.45
UFD1-206ENST00000466373 CSF1RP07333 972 aa12.22□□□□□ -0.45
UFD1-206ENST00000466373 FDPSP14324 419 aaKnown RBP12.22□□□□□ -0.45
UFD1-206ENST00000466373 ME1P48163 572 aa12.22□□□□□ -0.45
UFD1-206ENST00000466373 ZNF165P49910 485 aa12.22□□□□□ -0.45
UFD1-206ENST00000466373 TRIM28Q13263 835 aaKnown RBP12.22□□□□□ -0.45
UFD1-206ENST00000466373 NAA16Q6N069 864 aaPredicted RBP12.22□□□□□ -0.45
UFD1-206ENST00000466373 DRC7Q8IY82 874 aa12.22□□□□□ -0.45
UFD1-206ENST00000466373 GOLPH3LQ9H4A5 285 aa12.22□□□□□ -0.45
UFD1-206ENST00000466373 KLF18A0A0U1RQI7 1052 aa12.22□□□□□ -0.45
UFD1-206ENST00000466373 SNAP23O00161 211 aa12.22□□□□□ -0.45
UFD1-206ENST00000466373 IRS4O14654 1257 aaPredicted RBP12.22□□□□□ -0.45
UFD1-206ENST00000466373 APPP05067 770 aa12.22□□□□□ -0.45
UFD1-206ENST00000466373 POLR3DP05423 398 aaPredicted RBP12.22□□□□□ -0.45
UFD1-206ENST00000466373 APPBP2Q92624 585 aa12.22□□□□□ -0.45
UFD1-206ENST00000466373 PYCARDQ9ULZ3 195 aa12.22□□□□□ -0.45
UFD1-206ENST00000466373 RIPOR2Q9Y4F9 1068 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms