RNA–Protein interactions for RNA: ENST00000465659.5

ARHGEF3-204, Transcript of Rho guanine nucleotide exchange factor 3, humanhuman

TSL 1 (best)

Gene ARHGEF3, Length 2,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3-204ENST00000465659 CCDC186Q7Z3E2 898 aa15□□□□□ -0.01
ARHGEF3-204ENST00000465659 ZNF710Q8N1W2 664 aa15□□□□□ -0.01
ARHGEF3-204ENST00000465659 ZNF396Q96N95 335 aaPredicted RBP15□□□□□ -0.01
ARHGEF3-204ENST00000465659 NEUROD6Q96NK8 337 aa15□□□□□ -0.01
ARHGEF3-204ENST00000465659 DNAJC25Q9H1X3 360 aa15□□□□□ -0.01
ARHGEF3-204ENST00000465659 MAST3O60307 1309 aa15□□□□□ -0.01
ARHGEF3-204ENST00000465659 TIMM10P62072 90 aa15□□□□□ -0.01
ARHGEF3-204ENST00000465659 IQCB1Q15051 598 aa15□□□□□ -0.01
ARHGEF3-204ENST00000465659 KCPQ6ZWJ8 1503 aa14.99□□□□□ -0.01
ARHGEF3-204ENST00000465659 PDIA3P30101 505 aaKnown RBP14.99□□□□□ -0.01
ARHGEF3-204ENST00000465659 SNW1Q13573 536 aaKnown RBP14.99□□□□□ -0.01
ARHGEF3-204ENST00000465659 STX1AQ16623 288 aa14.99□□□□□ -0.01
ARHGEF3-204ENST00000465659 ZSCAN25Q6NSZ9 544 aa14.99□□□□□ -0.01
ARHGEF3-204ENST00000465659 TTLL7Q6ZT98 887 aa14.99□□□□□ -0.01
ARHGEF3-204ENST00000465659 CCAR1Q8IX12 1150 aaKnown RBP14.99□□□□□ -0.01
ARHGEF3-204ENST00000465659 ENGASEQ8NFI3 743 aa14.99□□□□□ -0.01
ARHGEF3-204ENST00000465659 ERVV-2B6SEH9 535 aa14.98□□□□□ -0.01
ARHGEF3-204ENST00000465659 CHRNA2Q15822 529 aa14.98□□□□□ -0.01
ARHGEF3-204ENST00000465659 CCDC94Q9BW85 323 aaPredicted RBP14.98□□□□□ -0.01
ARHGEF3-204ENST00000465659 IFIT1P09914 478 aaKnown RBP14.98□□□□□ -0.01
ARHGEF3-204ENST00000465659 ZMYND15Q9H091 742 aa14.98□□□□□ -0.01
ARHGEF3-204ENST00000465659 FBXO3Q9UK99 471 aa14.98□□□□□ -0.01
ARHGEF3-204ENST00000465659 DDX60Q8IY21 1712 aaKnown RBP14.97□□□□□ -0.01
ARHGEF3-204ENST00000465659 A0A1B0GUL7 405 aa14.97□□□□□ -0.01
ARHGEF3-204ENST00000465659 CTIFO43310 598 aaKnown RBP14.97□□□□□ -0.01
ARHGEF3-204ENST00000465659 FAM160A1Q05DH4 1040 aa14.97□□□□□ -0.01
ARHGEF3-204ENST00000465659 SLFNL1Q499Z3 407 aa14.97□□□□□ -0.01
ARHGEF3-204ENST00000465659 LRRC24Q50LG9 513 aa14.97□□□□□ -0.01
ARHGEF3-204ENST00000465659 CABLES1Q8TDN4 633 aa14.97□□□□□ -0.01
ARHGEF3-204ENST00000465659 DDX17Q92841 729 aaKnown RBP14.97□□□□□ -0.01
ARHGEF3-204ENST00000465659 MRFAP1L1Q96HT8 127 aa14.97□□□□□ -0.01
ARHGEF3-204ENST00000465659 USP28Q96RU2 1077 aa14.97□□□□□ -0.01
ARHGEF3-204ENST00000465659 GOLPH3LQ9H4A5 285 aa14.97□□□□□ -0.01
ARHGEF3-204ENST00000465659 PCDH11XQ9BZA7 1347 aa14.97□□□□□ -0.01
ARHGEF3-204ENST00000465659 PCDH11YQ9BZA8 1340 aa14.97□□□□□ -0.01
ARHGEF3-204ENST00000465659 LRRFIP1Q32MZ4 808 aaKnown RBP14.97□□□□□ -0.01
ARHGEF3-204ENST00000465659 CCDC73Q6ZRK6 1079 aa14.97□□□□□ -0.01
ARHGEF3-204ENST00000465659 DRC7Q8IY82 874 aa14.97□□□□□ -0.01
ARHGEF3-204ENST00000465659 NRBP1Q9UHY1 535 aa14.97□□□□□ -0.01
ARHGEF3-204ENST00000465659 SPATA31A3Q5VYP0 1347 aa14.97□□□□□ -0.01
ARHGEF3-204ENST00000465659 NWD2Q9ULI1 1742 aa14.97□□□□□ -0.01
ARHGEF3-204ENST00000465659 CARMIL3Q8ND23 1372 aa14.97□□□□□ -0.01
ARHGEF3-204ENST00000465659 RIOK3O14730 519 aaKnown RBP14.96□□□□□ -0.01
ARHGEF3-204ENST00000465659 TRHP20396 242 aaPredicted RBP14.96□□□□□ -0.01
ARHGEF3-204ENST00000465659 NKX1-1Q15270 411 aaPredicted RBP14.96□□□□□ -0.01
ARHGEF3-204ENST00000465659 ILDR1Q86SU0 546 aaPredicted RBP14.96□□□□□ -0.01
ARHGEF3-204ENST00000465659 CLIP2Q9UDT6 1046 aa14.96□□□□□ -0.01
ARHGEF3-204ENST00000465659 M0R2C6 588 aa14.96□□□□□ -0.02
ARHGEF3-204ENST00000465659 CCT2P78371 535 aaKnown RBP14.96□□□□□ -0.02
ARHGEF3-204ENST00000465659 BCL2L12Q9HB09 334 aa14.96□□□□□ -0.02
ARHGEF3-204ENST00000465659 CTNNA3Q9UI47 895 aa14.96□□□□□ -0.02
ARHGEF3-204ENST00000465659 TNS2Q63HR2 1409 aa14.96□□□□□ -0.02
ARHGEF3-204ENST00000465659 A0A0G2JLW4 131 aa14.95□□□□□ -0.02
ARHGEF3-204ENST00000465659 GOLGA6L19H0YKK7 550 aa14.95□□□□□ -0.02
ARHGEF3-204ENST00000465659 ZFYP08048 801 aaPredicted RBP14.95□□□□□ -0.02
ARHGEF3-204ENST00000465659 CEBPZQ03701 1054 aaKnown RBP14.95□□□□□ -0.02
ARHGEF3-204ENST00000465659 LRMPQ12912 555 aa14.95□□□□□ -0.02
ARHGEF3-204ENST00000465659 C11orf57Q6ZUT1 292 aaPredicted RBP14.95□□□□□ -0.02
ARHGEF3-204ENST00000465659 TSC1Q92574 1164 aa14.95□□□□□ -0.02
ARHGEF3-204ENST00000465659 NCOA5Q9HCD5 579 aaKnown RBP14.95□□□□□ -0.02
ARHGEF3-204ENST00000465659 RTEL1Q9NZ71 1219 aa14.95□□□□□ -0.02
ARHGEF3-204ENST00000465659 CCDC9Q9Y3X0 531 aaKnown RBP14.95□□□□□ -0.02
ARHGEF3-204ENST00000465659 ABCC12Q96J65 1359 aa14.95□□□□□ -0.02
ARHGEF3-204ENST00000465659 STRCP1A6NGW2 1772 aa14.95□□□□□ -0.02
ARHGEF3-204ENST00000465659 NEMFO60524 1076 aa14.95□□□□□ -0.02
ARHGEF3-204ENST00000465659 KINO60870 393 aaKnown RBP14.95□□□□□ -0.02
ARHGEF3-204ENST00000465659 FDPSP14324 419 aaKnown RBP14.95□□□□□ -0.02
ARHGEF3-204ENST00000465659 RGS22Q8NE09 1264 aa14.95□□□□□ -0.02
ARHGEF3-204ENST00000465659 OSBP2Q969R2 916 aa14.95□□□□□ -0.02
ARHGEF3-204ENST00000465659 ISCA1Q9BUE6 129 aa14.95□□□□□ -0.02
ARHGEF3-204ENST00000465659 FTOQ9C0B1 505 aaKnown RBP eCLIP14.95□□□□□ -0.02
ARHGEF3-204ENST00000465659 A0A1W2PQ27 194 aa14.94□□□□□ -0.02
ARHGEF3-204ENST00000465659 A0A1W2PQ64 194 aa14.94□□□□□ -0.02
ARHGEF3-204ENST00000465659 A0A1W2PQD8 194 aa14.94□□□□□ -0.02
ARHGEF3-204ENST00000465659 CACTINQ8WUQ7 758 aaKnown RBP14.94□□□□□ -0.02
ARHGEF3-204ENST00000465659 ZNF594Q96JF6 807 aaPredicted RBP14.94□□□□□ -0.02
ARHGEF3-204ENST00000465659 ANO10Q9NW15 660 aa14.94□□□□□ -0.02
ARHGEF3-204ENST00000465659 CEP126Q9P2H0 1117 aa14.94□□□□□ -0.02
ARHGEF3-204ENST00000465659 A1BGP04217 495 aa14.94□□□□□ -0.02
ARHGEF3-204ENST00000465659 ZCRB1Q8TBF4 217 aaKnown RBP14.94□□□□□ -0.02
ARHGEF3-204ENST00000465659 ANKRD7Q92527 254 aa14.94□□□□□ -0.02
ARHGEF3-204ENST00000465659 AKAP2Q9Y2D5 859 aa14.94□□□□□ -0.02
ARHGEF3-204ENST00000465659 FOXP2O15409 715 aa14.93□□□□□ -0.02
ARHGEF3-204ENST00000465659 CCDC144BQ3MJ40 725 aa14.93□□□□□ -0.02
ARHGEF3-204ENST00000465659 CADPS2Q86UW7 1296 aa14.93□□□□□ -0.02
ARHGEF3-204ENST00000465659 CCDC144CPQ8IYA2 1237 aa14.93□□□□□ -0.02
ARHGEF3-204ENST00000465659 FMR1NBQ8N0W7 255 aaPredicted RBP14.93□□□□□ -0.02
ARHGEF3-204ENST00000465659 PUS3Q9BZE2 481 aaKnown RBP14.93□□□□□ -0.02
ARHGEF3-204ENST00000465659 MYH7P12883 1935 aa14.93□□□□□ -0.02
ARHGEF3-204ENST00000465659 WDR17Q8IZU2 1322 aa14.93□□□□□ -0.02
ARHGEF3-204ENST00000465659 WDR19Q8NEZ3 1342 aa14.93□□□□□ -0.02
ARHGEF3-204ENST00000465659 RBM6P78332 1123 aaKnown RBP14.93□□□□□ -0.02
ARHGEF3-204ENST00000465659 TRIM28Q13263 835 aaKnown RBP14.93□□□□□ -0.02
ARHGEF3-204ENST00000465659 SYCP1Q15431 976 aa14.93□□□□□ -0.02
ARHGEF3-204ENST00000465659 CCDC158Q5M9N0 1113 aa14.93□□□□□ -0.02
ARHGEF3-204ENST00000465659 ADALQ6DHV7 355 aa14.93□□□□□ -0.02
ARHGEF3-204ENST00000465659 DHX40Q8IX18 779 aaKnown RBP14.93□□□□□ -0.02
ARHGEF3-204ENST00000465659 FSIP1Q8NA03 581 aa14.93□□□□□ -0.02
ARHGEF3-204ENST00000465659 ME1P48163 572 aa14.92□□□□□ -0.02
ARHGEF3-204ENST00000465659 TTLL5Q6EMB2 1281 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms