RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 GMLQ99445 158 aa27.51■■□□□ 1.99
LIME1-203ENST00000465591 USP17L3A6NCW0 530 aa27.5■■□□□ 1.99
LIME1-203ENST00000465591 USP17L4A6NCW7 530 aa27.5■■□□□ 1.99
LIME1-203ENST00000465591 CT47B1P0C2W7 299 aaPredicted RBP27.5■■□□□ 1.99
LIME1-203ENST00000465591 DLK2Q6UY11 383 aa27.5■■□□□ 1.99
LIME1-203ENST00000465591 USP17L1Q7RTZ2 530 aa27.5■■□□□ 1.99
LIME1-203ENST00000465591 MXD3Q9BW11 206 aa27.5■■□□□ 1.99
LIME1-203ENST00000465591 BICC1Q9H694 974 aaKnown RBP27.5■■□□□ 1.99
LIME1-203ENST00000465591 ANKRD44Q8N8A2 993 aa27.49■■□□□ 1.99
LIME1-203ENST00000465591 AGBL3Q8NEM8 1001 aa27.49■■□□□ 1.99
LIME1-203ENST00000465591 COA1Q9GZY4 146 aa27.49■■□□□ 1.99
LIME1-203ENST00000465591 USP44Q9H0E7 712 aa27.49■■□□□ 1.99
LIME1-203ENST00000465591 NOB1Q9ULX3 412 aaKnown RBP27.48■■□□□ 1.99
LIME1-203ENST00000465591 ASTN2O75129 1339 aaPredicted RBP27.47■■□□□ 1.99
LIME1-203ENST00000465591 RASSF10A6NK89 507 aa27.47■■□□□ 1.99
LIME1-203ENST00000465591 KCNJ4P48050 445 aa27.47■■□□□ 1.99
LIME1-203ENST00000465591 VEGFBP49765 207 aa27.47■■□□□ 1.99
LIME1-203ENST00000465591 ZNF280AP59817 542 aaPredicted RBP27.47■■□□□ 1.99
LIME1-203ENST00000465591 KIF4BQ2VIQ3 1234 aa27.47■■□□□ 1.99
LIME1-203ENST00000465591 RABL6Q3YEC7 729 aaPredicted RBP27.47■■□□□ 1.99
LIME1-203ENST00000465591 TAF7LQ5H9L4 462 aa27.47■■□□□ 1.99
LIME1-203ENST00000465591 DACT2Q5SW24 774 aa27.47■■□□□ 1.99
LIME1-203ENST00000465591 LDHAL6AQ6ZMR3 332 aa27.47■■□□□ 1.99
LIME1-203ENST00000465591 PUS3Q9BZE2 481 aaKnown RBP27.47■■□□□ 1.99
LIME1-203ENST00000465591 RARSP54136 660 aaKnown RBP27.46■■□□□ 1.99
LIME1-203ENST00000465591 ABT1Q9ULW3 272 aaKnown RBP27.46■■□□□ 1.99
LIME1-203ENST00000465591 BRPF1P55201 1214 aaPredicted RBP27.45■■□□□ 1.98
LIME1-203ENST00000465591 CDC37L1Q7L3B6 337 aa27.45■■□□□ 1.98
LIME1-203ENST00000465591 USP48Q86UV5 1035 aa27.45■■□□□ 1.98
LIME1-203ENST00000465591 CNNM1Q9NRU3 951 aa27.45■■□□□ 1.98
LIME1-203ENST00000465591 PLIN1O60240 522 aa27.44■■□□□ 1.98
LIME1-203ENST00000465591 HSPA1AP0DMV8 641 aaKnown RBP27.44■■□□□ 1.98
LIME1-203ENST00000465591 HSPA1BP0DMV9 641 aaKnown RBP27.44■■□□□ 1.98
LIME1-203ENST00000465591 DEFB115Q30KQ5 88 aa27.44■■□□□ 1.98
LIME1-203ENST00000465591 C15orf52Q6ZUT6 534 aaKnown RBP27.44■■□□□ 1.98
LIME1-203ENST00000465591 FBXW7Q969H0 707 aa27.44■■□□□ 1.98
LIME1-203ENST00000465591 CELF2O95319 508 aaKnown RBP27.43■■□□□ 1.98
LIME1-203ENST00000465591 USP17L8P0C7I0 530 aa27.43■■□□□ 1.98
LIME1-203ENST00000465591 STRIP1Q5VSL9 837 aa27.43■■□□□ 1.98
LIME1-203ENST00000465591 CD209Q9NNX6 404 aa27.43■■□□□ 1.98
LIME1-203ENST00000465591 ADM5C9JUS6 153 aa27.41■■□□□ 1.98
LIME1-203ENST00000465591 KRT26Q7Z3Y9 468 aa27.41■■□□□ 1.98
LIME1-203ENST00000465591 ZNF408Q9H9D4 720 aa27.41■■□□□ 1.98
LIME1-203ENST00000465591 MYOZ2Q9NPC6 264 aa27.41■■□□□ 1.98
LIME1-203ENST00000465591 GGA3Q9NZ52 723 aa27.41■■□□□ 1.98
LIME1-203ENST00000465591 RIPOR2Q9Y4F9 1068 aa27.41■■□□□ 1.98
LIME1-203ENST00000465591 TLL2Q9Y6L7 1015 aa27.41■■□□□ 1.98
LIME1-203ENST00000465591 GTF2IP78347 998 aa27.4■■□□□ 1.98
LIME1-203ENST00000465591 HNRNPUQ00839 825 aaKnown RBP eCLIP27.4■■□□□ 1.98
LIME1-203ENST00000465591 TTLL5Q6EMB2 1281 aa27.4■■□□□ 1.98
LIME1-203ENST00000465591 SCARF1Q14162 830 aa27.39■■□□□ 1.98
LIME1-203ENST00000465591 LRRC24Q50LG9 513 aa27.39■■□□□ 1.98
LIME1-203ENST00000465591 KLHDC4Q8TBB5 520 aa27.39■■□□□ 1.98
LIME1-203ENST00000465591 DCPSQ96C86 337 aaKnown RBP27.38■■□□□ 1.97
LIME1-203ENST00000465591 API5Q9BZZ5 524 aaKnown RBP27.38■■□□□ 1.97
LIME1-203ENST00000465591 WDR33Q9C0J8 1336 aaKnown RBP27.38■■□□□ 1.97
LIME1-203ENST00000465591 ANGEL2Q5VTE6 544 aaKnown RBP27.37■■□□□ 1.97
LIME1-203ENST00000465591 SAPCD2Q86UD0 394 aa27.37■■□□□ 1.97
LIME1-203ENST00000465591 MYO3BQ8WXR4 1341 aa27.37■■□□□ 1.97
LIME1-203ENST00000465591 IL1R1P14778 569 aa27.36■■□□□ 1.97
LIME1-203ENST00000465591 CYP4F22Q6NT55 531 aa27.36■■□□□ 1.97
LIME1-203ENST00000465591 CERS5Q8N5B7 392 aa27.36■■□□□ 1.97
LIME1-203ENST00000465591 THSD7BQ9C0I4 1608 aa27.35■■□□□ 1.97
LIME1-203ENST00000465591 RFX5P48382 616 aaPredicted RBP27.35■■□□□ 1.97
LIME1-203ENST00000465591 NBPF9Q3BBW0 867 aa27.35■■□□□ 1.97
LIME1-203ENST00000465591 ZNF804AQ7Z570 1209 aa27.35■■□□□ 1.97
LIME1-203ENST00000465591 KIAA0825Q8IV33 1275 aa27.35■■□□□ 1.97
LIME1-203ENST00000465591 CAPNS2Q96L46 248 aa27.35■■□□□ 1.97
LIME1-203ENST00000465591 SCAF8Q9UPN6 1271 aaKnown RBP27.35■■□□□ 1.97
LIME1-203ENST00000465591 TNNQ9UQP3 1299 aa27.35■■□□□ 1.97
LIME1-203ENST00000465591 BCAR3O75815 825 aa27.34■■□□□ 1.97
LIME1-203ENST00000465591 UBE4AQ14139 1066 aa27.34■■□□□ 1.97
LIME1-203ENST00000465591 PAXIP1Q6ZW49 1069 aaPredicted RBP27.34■■□□□ 1.97
LIME1-203ENST00000465591 JAG2Q9Y219 1238 aa27.34■■□□□ 1.97
LIME1-203ENST00000465591 KIF16BQ96L93 1317 aa27.34■■□□□ 1.97
LIME1-203ENST00000465591 GYG1P46976 350 aa27.33■■□□□ 1.97
LIME1-203ENST00000465591 VGLL2Q8N8G2 317 aa27.33■■□□□ 1.97
LIME1-203ENST00000465591 MROH5Q6ZUA9 1318 aa27.33■■□□□ 1.97
LIME1-203ENST00000465591 UBTFL1P0CB47 393 aaPredicted RBP27.32■■□□□ 1.96
LIME1-203ENST00000465591 GRM1Q13255 1194 aa27.32■■□□□ 1.96
LIME1-203ENST00000465591 COL13A1Q5TAT6 717 aaPredicted RBP27.32■■□□□ 1.96
LIME1-203ENST00000465591 SULF1Q8IWU6 871 aa27.32■■□□□ 1.96
LIME1-203ENST00000465591 ARHGAP45Q92619 1136 aa27.32■■□□□ 1.96
LIME1-203ENST00000465591 FAM84BQ96KN1 310 aaPredicted RBP27.32■■□□□ 1.96
LIME1-203ENST00000465591 WNT10BO00744 389 aa27.31■■□□□ 1.96
LIME1-203ENST00000465591 OGFOD1Q8N543 542 aa27.31■■□□□ 1.96
LIME1-203ENST00000465591 MEIS3Q99687 375 aa27.31■■□□□ 1.96
LIME1-203ENST00000465591 FOXN1O15353 648 aa27.3■■□□□ 1.96
LIME1-203ENST00000465591 SASH1O94885 1247 aa27.3■■□□□ 1.96
LIME1-203ENST00000465591 METTL24Q5JXM2 366 aa27.3■■□□□ 1.96
LIME1-203ENST00000465591 CDCA5Q96FF9 252 aa27.3■■□□□ 1.96
LIME1-203ENST00000465591 WBP1LQ9NX94 342 aa27.3■■□□□ 1.96
LIME1-203ENST00000465591 PTPN12Q05209 780 aaKnown RBP27.29■■□□□ 1.96
LIME1-203ENST00000465591 INTS3Q68E01 1043 aaKnown RBP27.29■■□□□ 1.96
LIME1-203ENST00000465591 TDRD7Q8NHU6 1098 aaKnown RBP27.29■■□□□ 1.96
LIME1-203ENST00000465591 ZBED3Q96IU2 234 aaPredicted RBP27.29■■□□□ 1.96
LIME1-203ENST00000465591 LRRFIP2Q9Y608 721 aaKnown RBP27.29■■□□□ 1.96
LIME1-203ENST00000465591 PITPNM2Q9BZ72 1349 aa27.29■■□□□ 1.96
LIME1-203ENST00000465591 AOC2O75106 756 aa27.28■■□□□ 1.96
LIME1-203ENST00000465591 TRIM27P14373 513 aa27.28■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms