RNA–Protein interactions for RNA: ENST00000465505.2

SNX4-202, Transcript of sorting nexin 4, humanhuman

TSL 5

Gene SNX4, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-202ENST00000465505 C1orf127Q8N9H9 656 aa5.92□□□□□ -1.46
SNX4-202ENST00000465505 GTF3C2Q8WUA4 911 aaPredicted RBP5.92□□□□□ -1.46
SNX4-202ENST00000465505 KANSL3Q9P2N6 904 aa5.92□□□□□ -1.46
SNX4-202ENST00000465505 GTF3C3Q9Y5Q9 886 aa5.92□□□□□ -1.46
SNX4-202ENST00000465505 A6NHS1 94 aa5.91□□□□□ -1.46
SNX4-202ENST00000465505 PDGFAP04085 211 aa5.91□□□□□ -1.46
SNX4-202ENST00000465505 GLB1P16278 677 aa5.91□□□□□ -1.46
SNX4-202ENST00000465505 CES1P23141 567 aa5.91□□□□□ -1.46
SNX4-202ENST00000465505 MZF1P28698 734 aaPredicted RBP5.91□□□□□ -1.46
SNX4-202ENST00000465505 EIF1AXP47813 144 aaKnown RBP5.91□□□□□ -1.46
SNX4-202ENST00000465505 NBPF11Q86T75 865 aa5.91□□□□□ -1.46
SNX4-202ENST00000465505 KLHL23Q8NBE8 558 aa5.91□□□□□ -1.46
SNX4-202ENST00000465505 KLHDC7BQ96G42 594 aa5.91□□□□□ -1.46
SNX4-202ENST00000465505 CARD10Q9BWT7 1032 aa5.91□□□□□ -1.46
SNX4-202ENST00000465505 DDX3YO15523 660 aaKnown RBP5.9□□□□□ -1.46
SNX4-202ENST00000465505 PPP1R15AO75807 674 aaPredicted RBP5.9□□□□□ -1.46
SNX4-202ENST00000465505 ACPPP15309 386 aa5.9□□□□□ -1.46
SNX4-202ENST00000465505 PCSK2P16519 638 aa5.9□□□□□ -1.46
SNX4-202ENST00000465505 PTPRAP18433 802 aa5.9□□□□□ -1.46
SNX4-202ENST00000465505 FSTP19883 344 aa5.9□□□□□ -1.46
SNX4-202ENST00000465505 MPSTP25325 297 aa5.9□□□□□ -1.46
SNX4-202ENST00000465505 FAM117BQ6P1L5 589 aa5.9□□□□□ -1.46
SNX4-202ENST00000465505 KIAA1211Q6ZU35 1233 aa5.9□□□□□ -1.46
SNX4-202ENST00000465505 CCDC82Q8N4S0 544 aa5.9□□□□□ -1.46
SNX4-202ENST00000465505 CHRDQ9H2X0 955 aa5.9□□□□□ -1.46
SNX4-202ENST00000465505 DZANK1Q9NVP4 752 aa5.9□□□□□ -1.46
SNX4-202ENST00000465505 RAXQ9Y2V3 346 aa5.9□□□□□ -1.46
SNX4-202ENST00000465505 ADAM11O75078 769 aa5.89□□□□□ -1.47
SNX4-202ENST00000465505 TRPA1O75762 1119 aa5.89□□□□□ -1.47
SNX4-202ENST00000465505 NPR3P17342 541 aa5.89□□□□□ -1.47
SNX4-202ENST00000465505 C8orf34Q49A92 452 aa5.89□□□□□ -1.47
SNX4-202ENST00000465505 ACAD11Q709F0 780 aa5.89□□□□□ -1.47
SNX4-202ENST00000465505 ARMC10Q8N2F6 343 aa5.89□□□□□ -1.47
SNX4-202ENST00000465505 PMEPA1Q969W9 287 aa5.89□□□□□ -1.47
SNX4-202ENST00000465505 SEC31BQ9NQW1 1179 aa5.89□□□□□ -1.47
SNX4-202ENST00000465505 MTMR3Q13615 1198 aa5.88□□□□□ -1.47
SNX4-202ENST00000465505 DUOXA2Q1HG44 320 aa5.88□□□□□ -1.47
SNX4-202ENST00000465505 ALKBH2Q6NS38 261 aa5.88□□□□□ -1.47
SNX4-202ENST00000465505 PHLDB3Q6NSJ2 640 aa5.88□□□□□ -1.47
SNX4-202ENST00000465505 FOXD4L4Q8WXT5 416 aaPredicted RBP5.88□□□□□ -1.47
SNX4-202ENST00000465505 WNT8BQ93098 351 aa5.88□□□□□ -1.47
SNX4-202ENST00000465505 FAM46AQ96IP4 442 aaKnown RBP5.88□□□□□ -1.47
SNX4-202ENST00000465505 HHIPQ96QV1 700 aa5.88□□□□□ -1.47
SNX4-202ENST00000465505 CEP41Q9BYV8 373 aa5.88□□□□□ -1.47
SNX4-202ENST00000465505 C1orf115Q9H7X2 142 aa5.88□□□□□ -1.47
SNX4-202ENST00000465505 OSGEPQ9NPF4 335 aa5.88□□□□□ -1.47
SNX4-202ENST00000465505 STOML1Q9UBI4 398 aa5.88□□□□□ -1.47
SNX4-202ENST00000465505 POLIQ9UNA4 740 aa5.88□□□□□ -1.47
SNX4-202ENST00000465505 H3BRJ5 948 aa5.87□□□□□ -1.47
SNX4-202ENST00000465505 PDE2AO00408 941 aaPredicted RBP5.87□□□□□ -1.47
SNX4-202ENST00000465505 PIP4K2BP78356 416 aa5.87□□□□□ -1.47
SNX4-202ENST00000465505 TMEM102Q8N9M5 508 aaPredicted RBP5.87□□□□□ -1.47
SNX4-202ENST00000465505 TTC16Q8NEE8 873 aa5.87□□□□□ -1.47
SNX4-202ENST00000465505 CARNS1A5YM72 827 aa5.86□□□□□ -1.47
SNX4-202ENST00000465505 FAM177BA6PVY3 158 aa5.86□□□□□ -1.47
SNX4-202ENST00000465505 DHX15O43143 795 aaKnown RBP5.86□□□□□ -1.47
SNX4-202ENST00000465505 TNFRSF21O75509 655 aa5.86□□□□□ -1.47
SNX4-202ENST00000465505 IGLV1-40P01703 118 aa5.86□□□□□ -1.47
SNX4-202ENST00000465505 CABP4P57796 275 aa5.86□□□□□ -1.47
SNX4-202ENST00000465505 UBASH3BQ8TF42 649 aa5.86□□□□□ -1.47
SNX4-202ENST00000465505 NXPE3Q969Y0 559 aa5.86□□□□□ -1.47
SNX4-202ENST00000465505 KRTAP9-2Q9BYQ4 174 aa5.86□□□□□ -1.47
SNX4-202ENST00000465505 SOX13Q9UN79 622 aa5.86□□□□□ -1.47
SNX4-202ENST00000465505 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.85□□□□□ -1.47
SNX4-202ENST00000465505 SOX1O00570 391 aaPredicted RBP5.85□□□□□ -1.47
SNX4-202ENST00000465505 EREGO14944 169 aa5.85□□□□□ -1.47
SNX4-202ENST00000465505 FZD6O60353 706 aa5.85□□□□□ -1.47
SNX4-202ENST00000465505 FAM13AO94988 1023 aa5.85□□□□□ -1.47
SNX4-202ENST00000465505 FKBP4Q02790 459 aaKnown RBP eCLIP5.85□□□□□ -1.47
SNX4-202ENST00000465505 UVSSAQ2YD98 709 aa5.85□□□□□ -1.47
SNX4-202ENST00000465505 HGSNATQ68CP4 663 aa5.85□□□□□ -1.47
SNX4-202ENST00000465505 OSMRQ99650 979 aa5.85□□□□□ -1.47
SNX4-202ENST00000465505 GSC2O15499 205 aa5.84□□□□□ -1.47
SNX4-202ENST00000465505 MED26O95402 600 aa5.84□□□□□ -1.47
SNX4-202ENST00000465505 SSTR4P31391 388 aa5.84□□□□□ -1.47
SNX4-202ENST00000465505 CD97P48960 835 aa5.84□□□□□ -1.47
SNX4-202ENST00000465505 AAMPQ13685 434 aa5.84□□□□□ -1.47
SNX4-202ENST00000465505 VN1R5Q7Z5H4 357 aa5.84□□□□□ -1.47
SNX4-202ENST00000465505 SLC7A3Q8WY07 619 aa5.84□□□□□ -1.47
SNX4-202ENST00000465505 UTP4Q969X6 686 aaKnown RBP5.84□□□□□ -1.47
SNX4-202ENST00000465505 MYRFLQ96LU7 910 aa5.84□□□□□ -1.47
SNX4-202ENST00000465505 ZKSCAN3Q9BRR0 538 aa5.84□□□□□ -1.47
SNX4-202ENST00000465505 HMX2A2RU54 273 aa5.83□□□□□ -1.48
SNX4-202ENST00000465505 MEGF11A6BM72 1044 aa5.83□□□□□ -1.48
SNX4-202ENST00000465505 PHACTR2O75167 634 aa5.83□□□□□ -1.48
SNX4-202ENST00000465505 EDN3P14138 238 aa5.83□□□□□ -1.48
SNX4-202ENST00000465505 USP5P45974 858 aa5.83□□□□□ -1.48
SNX4-202ENST00000465505 NLRP12P59046 1061 aa5.83□□□□□ -1.48
SNX4-202ENST00000465505 EHHADHQ08426 723 aa5.83□□□□□ -1.48
SNX4-202ENST00000465505 NFIAQ12857 509 aa5.83□□□□□ -1.48
SNX4-202ENST00000465505 SF3B2Q13435 895 aaKnown RBP5.83□□□□□ -1.48
SNX4-202ENST00000465505 RNF43Q68DV7 783 aa5.83□□□□□ -1.48
SNX4-202ENST00000465505 ZDHHC13Q8IUH4 622 aa5.83□□□□□ -1.48
SNX4-202ENST00000465505 CLEC10AQ8IUN9 316 aa5.83□□□□□ -1.48
SNX4-202ENST00000465505 TRIM42Q8IWZ5 723 aa5.83□□□□□ -1.48
SNX4-202ENST00000465505 BSNDQ8WZ55 320 aa5.83□□□□□ -1.48
SNX4-202ENST00000465505 RNF208Q9H0X6 261 aa5.83□□□□□ -1.48
SNX4-202ENST00000465505 C7orf69Q9H7B7 122 aa5.83□□□□□ -1.48
SNX4-202ENST00000465505 PCMTD2Q9NV79 361 aa5.83□□□□□ -1.48
SNX4-202ENST00000465505 CCDC87Q9NVE4 849 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms