RNA–Protein interactions for RNA: ENST00000464547.5

ATF3-207, Transcript of activating transcription factor 3, humanhuman

TSL 1 (best)

Gene ATF3, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-207ENST00000464547 HELBQ8NG08 1087 aaPredicted RBP11.74□□□□□ -0.53
ATF3-207ENST00000464547 LPIN2Q92539 896 aa11.74□□□□□ -0.53
ATF3-207ENST00000464547 OSBP2Q969R2 916 aa11.74□□□□□ -0.53
ATF3-207ENST00000464547 NEK1Q96PY6 1258 aa11.74□□□□□ -0.53
ATF3-207ENST00000464547 GZF1Q9H116 711 aaPredicted RBP11.74□□□□□ -0.53
ATF3-207ENST00000464547 BCL2L12Q9HB09 334 aa11.74□□□□□ -0.53
ATF3-207ENST00000464547 LMBRD1Q9NUN5 540 aa11.74□□□□□ -0.53
ATF3-207ENST00000464547 TPCN1Q9ULQ1 816 aa11.74□□□□□ -0.53
ATF3-207ENST00000464547 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.74□□□□□ -0.53
ATF3-207ENST00000464547 BTAF1O14981 1849 aa11.74□□□□□ -0.53
ATF3-207ENST00000464547 ATRNO75882 1429 aa11.73□□□□□ -0.53
ATF3-207ENST00000464547 UQCRFS1P1P0C7P4 283 aa11.73□□□□□ -0.53
ATF3-207ENST00000464547 HSPD1P10809 573 aaKnown RBP11.73□□□□□ -0.53
ATF3-207ENST00000464547 SLC5A1P13866 664 aa11.73□□□□□ -0.53
ATF3-207ENST00000464547 ARID4AP29374 1257 aaPredicted RBP11.73□□□□□ -0.53
ATF3-207ENST00000464547 PHKA1P46020 1223 aa11.73□□□□□ -0.53
ATF3-207ENST00000464547 AFF2P51816 1311 aa11.73□□□□□ -0.53
ATF3-207ENST00000464547 TOB2Q14106 344 aaPredicted RBP11.73□□□□□ -0.53
ATF3-207ENST00000464547 ANKRD1Q15327 319 aa11.73□□□□□ -0.53
ATF3-207ENST00000464547 ERFEQ4G0M1 354 aa11.73□□□□□ -0.53
ATF3-207ENST00000464547 CCDC102BQ68D86 513 aa11.73□□□□□ -0.53
ATF3-207ENST00000464547 STOX1Q6ZVD7 989 aa11.73□□□□□ -0.53
ATF3-207ENST00000464547 NECAB1Q8N987 351 aa11.73□□□□□ -0.53
ATF3-207ENST00000464547 CHAMP1Q96JM3 812 aa11.73□□□□□ -0.53
ATF3-207ENST00000464547 TCEANC2Q96MN5 208 aa11.73□□□□□ -0.53
ATF3-207ENST00000464547 MPHOSPH8Q99549 860 aa11.73□□□□□ -0.53
ATF3-207ENST00000464547 PIH1D3Q9NQM4 214 aaKnown RBP11.73□□□□□ -0.53
ATF3-207ENST00000464547 SMC3Q9UQE7 1217 aa11.73□□□□□ -0.53
ATF3-207ENST00000464547 WDR33Q9C0J8 1336 aaKnown RBP11.72□□□□□ -0.53
ATF3-207ENST00000464547 ONECUT3O60422 494 aaPredicted RBP11.72□□□□□ -0.53
ATF3-207ENST00000464547 IGHMBP2P38935 993 aaKnown RBP11.72□□□□□ -0.53
ATF3-207ENST00000464547 WASHC4Q2M389 1173 aa11.72□□□□□ -0.53
ATF3-207ENST00000464547 SLC10A5Q5PT55 438 aa11.72□□□□□ -0.53
ATF3-207ENST00000464547 TBC1D9BQ66K14 1250 aa11.72□□□□□ -0.53
ATF3-207ENST00000464547 C3orf67Q6ZVT6 689 aa11.72□□□□□ -0.53
ATF3-207ENST00000464547 APPBP2Q92624 585 aa11.72□□□□□ -0.53
ATF3-207ENST00000464547 NARFQ9UHQ1 456 aa11.72□□□□□ -0.53
ATF3-207ENST00000464547 CCNL1Q9UK58 526 aaPredicted RBP11.72□□□□□ -0.53
ATF3-207ENST00000464547 ARAP2Q8WZ64 1704 aa11.72□□□□□ -0.53
ATF3-207ENST00000464547 SCN7AQ01118 1682 aa11.71□□□□□ -0.53
ATF3-207ENST00000464547 A0A0G2JLW4 131 aa11.71□□□□□ -0.53
ATF3-207ENST00000464547 FSD2A1L4K1 749 aa11.71□□□□□ -0.53
ATF3-207ENST00000464547 ADD2P35612 726 aa11.71□□□□□ -0.53
ATF3-207ENST00000464547 TTF1Q15361 905 aaPredicted RBP11.71□□□□□ -0.53
ATF3-207ENST00000464547 SF3B3Q15393 1217 aaKnown RBP11.71□□□□□ -0.53
ATF3-207ENST00000464547 BICDL1Q6ZP65 573 aa11.71□□□□□ -0.53
ATF3-207ENST00000464547 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.71□□□□□ -0.53
ATF3-207ENST00000464547 SRP68Q9UHB9 627 aaKnown RBP11.71□□□□□ -0.53
ATF3-207ENST00000464547 TRPC5Q9UL62 973 aaPredicted RBP11.71□□□□□ -0.53
ATF3-207ENST00000464547 AKAP11Q9UKA4 1901 aa11.7□□□□□ -0.54
ATF3-207ENST00000464547 SNAP23O00161 211 aa11.7□□□□□ -0.54
ATF3-207ENST00000464547 GNPATO15228 680 aa11.7□□□□□ -0.54
ATF3-207ENST00000464547 FOXP2O15409 715 aa11.7□□□□□ -0.54
ATF3-207ENST00000464547 PRPF40AO75400 957 aaKnown RBP11.7□□□□□ -0.54
ATF3-207ENST00000464547 SYT1P21579 422 aa11.7□□□□□ -0.54
ATF3-207ENST00000464547 GJB2P29033 226 aa11.7□□□□□ -0.54
ATF3-207ENST00000464547 KLHL40Q2TBA0 621 aa11.7□□□□□ -0.54
ATF3-207ENST00000464547 TTLL5Q6EMB2 1281 aa11.7□□□□□ -0.54
ATF3-207ENST00000464547 ZSCAN25Q6NSZ9 544 aa11.7□□□□□ -0.54
ATF3-207ENST00000464547 Q6ZUG5 572 aa11.7□□□□□ -0.54
ATF3-207ENST00000464547 SEPT12Q8IYM1 358 aa11.7□□□□□ -0.54
ATF3-207ENST00000464547 CDC5LQ99459 802 aaKnown RBP11.7□□□□□ -0.54
ATF3-207ENST00000464547 PUS7LQ9H0K6 701 aaKnown RBP11.7□□□□□ -0.54
ATF3-207ENST00000464547 COL4A1P02462 1669 aa11.7□□□□□ -0.54
ATF3-207ENST00000464547 E7EWF7 191 aa11.69□□□□□ -0.54
ATF3-207ENST00000464547 STX6O43752 255 aa11.69□□□□□ -0.54
ATF3-207ENST00000464547 HMGB1P09429 215 aaKnown RBP11.69□□□□□ -0.54
ATF3-207ENST00000464547 ZSCAN22P10073 491 aaPredicted RBP11.69□□□□□ -0.54
ATF3-207ENST00000464547 EXOSC10Q01780 885 aaKnown RBP11.69□□□□□ -0.54
ATF3-207ENST00000464547 CHRNDQ07001 517 aa11.69□□□□□ -0.54
ATF3-207ENST00000464547 L1TD1Q5T7N2 865 aaKnown RBP11.69□□□□□ -0.54
ATF3-207ENST00000464547 DHX32Q7L7V1 743 aaKnown RBP11.69□□□□□ -0.54
ATF3-207ENST00000464547 CTNNA3Q9UI47 895 aa11.69□□□□□ -0.54
ATF3-207ENST00000464547 RTCBQ9Y3I0 505 aaKnown RBP11.69□□□□□ -0.54
ATF3-207ENST00000464547 DDX49Q9Y6V7 483 aaKnown RBP11.69□□□□□ -0.54
ATF3-207ENST00000464547 LY75O60449 1722 aa11.69□□□□□ -0.54
ATF3-207ENST00000464547 TCRBV5S4A2TA0A5A2 114 aa11.68□□□□□ -0.54
ATF3-207ENST00000464547 GOLGA6L3A6NEY3 463 aa11.68□□□□□ -0.54
ATF3-207ENST00000464547 GPAA1O43292 621 aa11.68□□□□□ -0.54
ATF3-207ENST00000464547 DTNBO60941 627 aa11.68□□□□□ -0.54
ATF3-207ENST00000464547 ZPR1O75312 459 aa11.68□□□□□ -0.54
ATF3-207ENST00000464547 PDE6AP16499 860 aa11.68□□□□□ -0.54
ATF3-207ENST00000464547 UBE3CQ15386 1083 aa11.68□□□□□ -0.54
ATF3-207ENST00000464547 SLC9C2Q5TAH2 1124 aa11.68□□□□□ -0.54
ATF3-207ENST00000464547 AMIGO3Q86WK7 504 aa11.68□□□□□ -0.54
ATF3-207ENST00000464547 ANKRD18AQ8IVF6 992 aa11.68□□□□□ -0.54
ATF3-207ENST00000464547 SPATA5Q8NB90 893 aa11.68□□□□□ -0.54
ATF3-207ENST00000464547 ARHGEF1Q92888 912 aaKnown RBP11.68□□□□□ -0.54
ATF3-207ENST00000464547 SETDB2Q96T68 719 aa11.68□□□□□ -0.54
ATF3-207ENST00000464547 NYXQ9GZU5 481 aa11.68□□□□□ -0.54
ATF3-207ENST00000464547 WWC3Q9ULE0 1092 aa11.68□□□□□ -0.54
ATF3-207ENST00000464547 MTMR6Q9Y217 621 aa11.68□□□□□ -0.54
ATF3-207ENST00000464547 SBF2Q86WG5 1849 aa11.67□□□□□ -0.54
ATF3-207ENST00000464547 ZNF532Q9HCE3 1301 aa11.67□□□□□ -0.54
ATF3-207ENST00000464547 COL24A1Q17RW2 1714 aa11.67□□□□□ -0.54
ATF3-207ENST00000464547 IDH1O75874 414 aaKnown RBP11.67□□□□□ -0.54
ATF3-207ENST00000464547 F13A1P00488 732 aa11.67□□□□□ -0.54
ATF3-207ENST00000464547 FGAP02671 866 aa11.67□□□□□ -0.54
ATF3-207ENST00000464547 GTF2E1P29083 439 aaPredicted RBP11.67□□□□□ -0.54
ATF3-207ENST00000464547 BCAMP50895 628 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms