RNA–Protein interactions for RNA: ENST00000464437.1

RPGR-204, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 3

Gene RPGR, Length 428 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-204ENST00000464437 NFKBIEO00221 500 aa8.4□□□□□ -1.06
RPGR-204ENST00000464437 LMNB1P20700 586 aa8.4□□□□□ -1.06
RPGR-204ENST00000464437 TRIM28Q13263 835 aaKnown RBP8.4□□□□□ -1.06
RPGR-204ENST00000464437 CCDC93Q567U6 631 aa8.4□□□□□ -1.06
RPGR-204ENST00000464437 SLC10A5Q5PT55 438 aa8.4□□□□□ -1.06
RPGR-204ENST00000464437 C6orf132Q5T0Z8 1188 aa8.4□□□□□ -1.06
RPGR-204ENST00000464437 SYNE4Q8N205 404 aa8.4□□□□□ -1.06
RPGR-204ENST00000464437 TAOK3Q9H2K8 898 aa8.4□□□□□ -1.06
RPGR-204ENST00000464437 CWC25Q9NXE8 425 aaPredicted RBP8.4□□□□□ -1.06
RPGR-204ENST00000464437 IRS4O14654 1257 aaPredicted RBP8.39□□□□□ -1.07
RPGR-204ENST00000464437 PPEF1O14829 653 aaPredicted RBP8.39□□□□□ -1.07
RPGR-204ENST00000464437 HOXA10P31260 410 aaPredicted RBP8.39□□□□□ -1.07
RPGR-204ENST00000464437 SLFN5Q08AF3 891 aa8.39□□□□□ -1.07
RPGR-204ENST00000464437 TJAP1Q5JTD0 557 aa8.39□□□□□ -1.07
RPGR-204ENST00000464437 ZBTB38Q8NAP3 1195 aaPredicted RBP8.39□□□□□ -1.07
RPGR-204ENST00000464437 CCDC191Q8NCU4 936 aa8.39□□□□□ -1.07
RPGR-204ENST00000464437 CDCA7LQ96GN5 454 aa8.39□□□□□ -1.07
RPGR-204ENST00000464437 CRAMP1Q96RY5 1269 aa8.39□□□□□ -1.07
RPGR-204ENST00000464437 GPBP1L1Q9HC44 474 aaPredicted RBP8.39□□□□□ -1.07
RPGR-204ENST00000464437 DDX60Q8IY21 1712 aaKnown RBP8.39□□□□□ -1.07
RPGR-204ENST00000464437 LAMB2P55268 1798 aa8.38□□□□□ -1.07
RPGR-204ENST00000464437 TIAM2Q8IVF5 1701 aa8.38□□□□□ -1.07
RPGR-204ENST00000464437 ABCC4O15439 1325 aa8.38□□□□□ -1.07
RPGR-204ENST00000464437 LTBP3Q9NS15 1303 aa8.38□□□□□ -1.07
RPGR-204ENST00000464437 IGKV5-2P06315 115 aa8.38□□□□□ -1.07
RPGR-204ENST00000464437 HSP90B1P14625 803 aaKnown RBP8.38□□□□□ -1.07
RPGR-204ENST00000464437 CWF19L2Q2TBE0 894 aaKnown RBP8.38□□□□□ -1.07
RPGR-204ENST00000464437 PPP1R18Q6NYC8 613 aa8.38□□□□□ -1.07
RPGR-204ENST00000464437 OLFM4Q6UX06 510 aa8.38□□□□□ -1.07
RPGR-204ENST00000464437 DDX46Q7L014 1031 aaKnown RBP8.38□□□□□ -1.07
RPGR-204ENST00000464437 RTKN2Q8IZC4 609 aa8.38□□□□□ -1.07
RPGR-204ENST00000464437 C7orf43Q8WVR3 580 aa8.38□□□□□ -1.07
RPGR-204ENST00000464437 DNAAF4Q8WXU2 420 aa8.38□□□□□ -1.07
RPGR-204ENST00000464437 TMX4Q9H1E5 349 aaPredicted RBP8.38□□□□□ -1.07
RPGR-204ENST00000464437 RYDENQ9NUL5 291 aaKnown RBP8.38□□□□□ -1.07
RPGR-204ENST00000464437 FER1L6Q2WGJ9 1857 aa8.38□□□□□ -1.07
RPGR-204ENST00000464437 ZC3H4Q9UPT8 1303 aaKnown RBP8.37□□□□□ -1.07
RPGR-204ENST00000464437 NEURL1BA8MQ27 555 aa8.37□□□□□ -1.07
RPGR-204ENST00000464437 F6X3S4 739 aa8.37□□□□□ -1.07
RPGR-204ENST00000464437 PCCAP05165 728 aaPredicted RBP8.37□□□□□ -1.07
RPGR-204ENST00000464437 PRELPP51888 382 aa8.37□□□□□ -1.07
RPGR-204ENST00000464437 PPP4CP60510 307 aa8.37□□□□□ -1.07
RPGR-204ENST00000464437 HNRNPUQ00839 825 aaKnown RBP eCLIP8.37□□□□□ -1.07
RPGR-204ENST00000464437 FKBP4Q02790 459 aaKnown RBP eCLIP8.37□□□□□ -1.07
RPGR-204ENST00000464437 CC2D2BQ6DHV5 1058 aa8.37□□□□□ -1.07
RPGR-204ENST00000464437 JARID2Q92833 1246 aaPredicted RBP8.37□□□□□ -1.07
RPGR-204ENST00000464437 SBF1O95248 1867 aa8.36□□□□□ -1.07
RPGR-204ENST00000464437 KDM2BQ8NHM5 1336 aa8.36□□□□□ -1.07
RPGR-204ENST00000464437 PDE8AO60658 829 aa8.36□□□□□ -1.07
RPGR-204ENST00000464437 BBOX1O75936 387 aa8.36□□□□□ -1.07
RPGR-204ENST00000464437 GRAPQ13588 217 aa8.36□□□□□ -1.07
RPGR-204ENST00000464437 SF3B3Q15393 1217 aaKnown RBP8.36□□□□□ -1.07
RPGR-204ENST00000464437 GRIPAP1Q4V328 841 aa8.36□□□□□ -1.07
RPGR-204ENST00000464437 UBE3BQ7Z3V4 1068 aa8.36□□□□□ -1.07
RPGR-204ENST00000464437 LINS1Q8NG48 757 aa8.36□□□□□ -1.07
RPGR-204ENST00000464437 GRAPLQ8TC17 118 aaPredicted RBP8.36□□□□□ -1.07
RPGR-204ENST00000464437 BCL2L13Q9BXK5 485 aa8.36□□□□□ -1.07
RPGR-204ENST00000464437 ZNF277Q9NRM2 450 aaPredicted RBP8.36□□□□□ -1.07
RPGR-204ENST00000464437 ATP6V0A2Q9Y487 856 aa8.36□□□□□ -1.07
RPGR-204ENST00000464437 V9GY48 417 aaPredicted RBP8.36□□□□□ -1.07
RPGR-204ENST00000464437 CDHR2Q9BYE9 1310 aa8.35□□□□□ -1.07
RPGR-204ENST00000464437 GCKRQ14397 625 aa8.35□□□□□ -1.07
RPGR-204ENST00000464437 MFSD10Q14728 455 aa8.35□□□□□ -1.07
RPGR-204ENST00000464437 CCDC152Q4G0S7 254 aa8.35□□□□□ -1.07
RPGR-204ENST00000464437 SLC4A10Q6U841 1118 aa8.35□□□□□ -1.07
RPGR-204ENST00000464437 TMC4Q7Z404 712 aa8.35□□□□□ -1.07
RPGR-204ENST00000464437 SLC51AQ86UW1 340 aa8.35□□□□□ -1.07
RPGR-204ENST00000464437 TRMT2AQ8IZ69 625 aaKnown RBP8.35□□□□□ -1.07
RPGR-204ENST00000464437 SSH1Q8WYL5 1049 aa8.35□□□□□ -1.07
RPGR-204ENST00000464437 CCDC85AQ96PX6 553 aaPredicted RBP8.35□□□□□ -1.07
RPGR-204ENST00000464437 PSMD1Q99460 953 aa8.35□□□□□ -1.07
RPGR-204ENST00000464437 MTRQ99707 1265 aa8.35□□□□□ -1.07
RPGR-204ENST00000464437 SMC4Q9NTJ3 1288 aa8.35□□□□□ -1.07
RPGR-204ENST00000464437 SNED1Q8TER0 1413 aa8.35□□□□□ -1.07
RPGR-204ENST00000464437 CACNA1FO60840 1977 aa8.35□□□□□ -1.07
RPGR-204ENST00000464437 PTPRCP08575 1304 aa8.34□□□□□ -1.07
RPGR-204ENST00000464437 CT47B1P0C2W7 299 aaPredicted RBP8.34□□□□□ -1.07
RPGR-204ENST00000464437 IARSP41252 1262 aaKnown RBP8.34□□□□□ -1.07
RPGR-204ENST00000464437 CTSWP56202 376 aa8.34□□□□□ -1.07
RPGR-204ENST00000464437 ALDH1L2Q3SY69 923 aa8.34□□□□□ -1.07
RPGR-204ENST00000464437 BEND3Q5T5X7 828 aa8.34□□□□□ -1.07
RPGR-204ENST00000464437 DPP8Q6V1X1 898 aaPredicted RBP8.34□□□□□ -1.07
RPGR-204ENST00000464437 SP8Q8IXZ3 490 aa8.34□□□□□ -1.07
RPGR-204ENST00000464437 CELF1Q92879 486 aaKnown RBP8.34□□□□□ -1.07
RPGR-204ENST00000464437 NMRK2Q9NPI5 230 aa8.34□□□□□ -1.07
RPGR-204ENST00000464437 CCDC88AQ3V6T2 1871 aa8.34□□□□□ -1.07
RPGR-204ENST00000464437 GLTPD2A6NH11 291 aa8.33□□□□□ -1.08
RPGR-204ENST00000464437 LRRC37AA6NMS7 1700 aa8.33□□□□□ -1.08
RPGR-204ENST00000464437 H7C1W4 665 aa8.33□□□□□ -1.08
RPGR-204ENST00000464437 MPNDQ8N594 471 aa8.33□□□□□ -1.08
RPGR-204ENST00000464437 SUPT20HQ8NEM7 779 aa8.33□□□□□ -1.08
RPGR-204ENST00000464437 JDP2Q8WYK2 163 aa8.33□□□□□ -1.08
RPGR-204ENST00000464437 EPAS1Q99814 870 aa8.33□□□□□ -1.08
RPGR-204ENST00000464437 SRCIN1Q9C0H9 1055 aa8.33□□□□□ -1.08
RPGR-204ENST00000464437 SEC31BQ9NQW1 1179 aa8.33□□□□□ -1.08
RPGR-204ENST00000464437 COL4A1P02462 1669 aa8.33□□□□□ -1.08
RPGR-204ENST00000464437 DICER1Q9UPY3 1922 aaKnown RBP8.33□□□□□ -1.08
RPGR-204ENST00000464437 TAF1P21675 1872 aa8.32□□□□□ -1.08
RPGR-204ENST00000464437 GRM8O00222 908 aa8.32□□□□□ -1.08
RPGR-204ENST00000464437 PPIP5K2O43314 1243 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms