RNA–Protein interactions for RNA: ENST00000462289.1

VPS36-202, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-202ENST00000462289 TPRNQ4KMQ1 711 aa7.86□□□□□ -1.15
VPS36-202ENST00000462289 ILDR2Q71H61 639 aa7.86□□□□□ -1.15
VPS36-202ENST00000462289 NLRP3Q96P20 1036 aa7.86□□□□□ -1.15
VPS36-202ENST00000462289 QTRT2Q9H974 415 aaKnown RBP7.86□□□□□ -1.15
VPS36-202ENST00000462289 POLKQ9UBT6 870 aa7.86□□□□□ -1.15
VPS36-202ENST00000462289 THRAP3Q9Y2W1 955 aaKnown RBP7.86□□□□□ -1.15
VPS36-202ENST00000462289 POU4F2Q12837 409 aa7.85□□□□□ -1.15
VPS36-202ENST00000462289 CHRNA2Q15822 529 aa7.85□□□□□ -1.15
VPS36-202ENST00000462289 DBN1Q16643 649 aa7.85□□□□□ -1.15
VPS36-202ENST00000462289 SLC27A3Q5K4L6 730 aa7.85□□□□□ -1.15
VPS36-202ENST00000462289 MEX3CQ5U5Q3 659 aaKnown RBP7.85□□□□□ -1.15
VPS36-202ENST00000462289 NBPF10Q6P3W6 841 aaKnown RBP7.85□□□□□ -1.15
VPS36-202ENST00000462289 NBPF15Q8N660 670 aa7.85□□□□□ -1.15
VPS36-202ENST00000462289 CCDC85AQ96PX6 553 aaPredicted RBP7.85□□□□□ -1.15
VPS36-202ENST00000462289 CARD10Q9BWT7 1032 aa7.85□□□□□ -1.15
VPS36-202ENST00000462289 ARHGEF10LQ9HCE6 1279 aa7.85□□□□□ -1.15
VPS36-202ENST00000462289 KNSTRNQ9Y448 316 aa7.85□□□□□ -1.15
VPS36-202ENST00000462289 HRH3Q9Y5N1 445 aa7.85□□□□□ -1.15
VPS36-202ENST00000462289 KDRP35968 1356 aa7.84□□□□□ -1.15
VPS36-202ENST00000462289 ADAMTS7Q9UKP4 1686 aa7.84□□□□□ -1.15
VPS36-202ENST00000462289 FBLN1P23142 703 aa7.84□□□□□ -1.15
VPS36-202ENST00000462289 ESYT1Q9BSJ8 1104 aa7.84□□□□□ -1.15
VPS36-202ENST00000462289 MBIPQ9NS73 344 aa7.84□□□□□ -1.15
VPS36-202ENST00000462289 TBC1D2BQ9UPU7 963 aa7.84□□□□□ -1.15
VPS36-202ENST00000462289 RGPD3A6NKT7 1758 aaPredicted RBP7.84□□□□□ -1.15
VPS36-202ENST00000462289 RGPD4Q7Z3J3 1758 aa7.84□□□□□ -1.15
VPS36-202ENST00000462289 TNS1Q9HBL0 1735 aaKnown RBP7.83□□□□□ -1.16
VPS36-202ENST00000462289 H7C1W4 665 aa7.83□□□□□ -1.16
VPS36-202ENST00000462289 IL2RAP01589 272 aa7.83□□□□□ -1.16
VPS36-202ENST00000462289 RXRBP28702 533 aa7.83□□□□□ -1.16
VPS36-202ENST00000462289 RASSF7Q02833 373 aa7.83□□□□□ -1.16
VPS36-202ENST00000462289 IRF5Q13568 498 aa7.83□□□□□ -1.16
VPS36-202ENST00000462289 LARP1Q6PKG0 1096 aaKnown RBP7.83□□□□□ -1.16
VPS36-202ENST00000462289 LYPD4Q6UWN0 246 aa7.83□□□□□ -1.16
VPS36-202ENST00000462289 PHTF2Q8N3S3 785 aa7.83□□□□□ -1.16
VPS36-202ENST00000462289 CDCA7Q9BWT1 371 aaPredicted RBP7.83□□□□□ -1.16
VPS36-202ENST00000462289 OVOS2A0A0G2JMS6 1433 aa7.82□□□□□ -1.16
VPS36-202ENST00000462289 RRS1Q15050 365 aaKnown RBP7.82□□□□□ -1.16
VPS36-202ENST00000462289 TNS2Q63HR2 1409 aa7.82□□□□□ -1.16
VPS36-202ENST00000462289 TAS1R3Q7RTX0 852 aa7.82□□□□□ -1.16
VPS36-202ENST00000462289 TCP11L2Q8N4U5 519 aa7.82□□□□□ -1.16
VPS36-202ENST00000462289 CNKSR1Q969H4 720 aa7.82□□□□□ -1.16
VPS36-202ENST00000462289 VIRMAQ69YN4 1812 aaKnown RBP7.82□□□□□ -1.16
VPS36-202ENST00000462289 IGSF1Q8N6C5 1336 aa7.81□□□□□ -1.16
VPS36-202ENST00000462289 MYCP01106 439 aaPredicted RBP7.81□□□□□ -1.16
VPS36-202ENST00000462289 CELA2BP08218 269 aaPredicted RBP7.81□□□□□ -1.16
VPS36-202ENST00000462289 HSP90AB2PQ58FF8 381 aa7.81□□□□□ -1.16
VPS36-202ENST00000462289 FOXR1Q6PIV2 292 aa7.81□□□□□ -1.16
VPS36-202ENST00000462289 RIPOR1Q6ZS17 1223 aa7.81□□□□□ -1.16
VPS36-202ENST00000462289 TMEM151AQ8N4L1 468 aa7.81□□□□□ -1.16
VPS36-202ENST00000462289 XAGE2Q96GT9 111 aa7.81□□□□□ -1.16
VPS36-202ENST00000462289 PRM3Q9NNZ6 103 aa7.81□□□□□ -1.16
VPS36-202ENST00000462289 RAB6BQ9NRW1 208 aa7.81□□□□□ -1.16
VPS36-202ENST00000462289 MEGF6O75095 1541 aa7.81□□□□□ -1.16
VPS36-202ENST00000462289 NHSQ6T4R5 1651 aa7.8□□□□□ -1.16
VPS36-202ENST00000462289 GPR25O00155 361 aa7.8□□□□□ -1.16
VPS36-202ENST00000462289 GDF11O95390 407 aa7.8□□□□□ -1.16
VPS36-202ENST00000462289 F11P03951 625 aa7.8□□□□□ -1.16
VPS36-202ENST00000462289 CENPCQ03188 943 aa7.8□□□□□ -1.16
VPS36-202ENST00000462289 ANKRD24Q8TF21 1146 aa7.8□□□□□ -1.16
VPS36-202ENST00000462289 GAS2L1Q99501 681 aaPredicted RBP7.8□□□□□ -1.16
VPS36-202ENST00000462289 FHDC1Q9C0D6 1143 aaPredicted RBP7.8□□□□□ -1.16
VPS36-202ENST00000462289 TIMMDC1Q9NPL8 285 aa7.8□□□□□ -1.16
VPS36-202ENST00000462289 TOGARAM1Q9Y4F4 1720 aa7.8□□□□□ -1.16
VPS36-202ENST00000462289 IL13P35225 146 aa7.79□□□□□ -1.16
VPS36-202ENST00000462289 EIF4A2Q14240 407 aaKnown RBP7.79□□□□□ -1.16
VPS36-202ENST00000462289 NBPF6Q5VWK0 638 aa7.79□□□□□ -1.16
VPS36-202ENST00000462289 MORC1Q86VD1 984 aa7.79□□□□□ -1.16
VPS36-202ENST00000462289 GTPBP3Q969Y2 492 aaKnown RBP7.79□□□□□ -1.16
VPS36-202ENST00000462289 NBPF4Q96M43 638 aa7.79□□□□□ -1.16
VPS36-202ENST00000462289 POLR3GLQ9BT43 218 aa7.79□□□□□ -1.16
VPS36-202ENST00000462289 ITGB4P16144 1822 aa7.78□□□□□ -1.16
VPS36-202ENST00000462289 THBS1P07996 1170 aa7.78□□□□□ -1.16
VPS36-202ENST00000462289 PPP2R1AP30153 589 aa7.78□□□□□ -1.16
VPS36-202ENST00000462289 AMPHP49418 695 aa7.78□□□□□ -1.16
VPS36-202ENST00000462289 MAP3K10Q02779 954 aa7.78□□□□□ -1.16
VPS36-202ENST00000462289 USP4Q13107 963 aa7.78□□□□□ -1.16
VPS36-202ENST00000462289 TSGA10IPQ3SY00 556 aa7.78□□□□□ -1.16
VPS36-202ENST00000462289 KCTD17Q8N5Z5 321 aa7.78□□□□□ -1.16
VPS36-202ENST00000462289 SCARF2Q96GP6 870 aaPredicted RBP7.78□□□□□ -1.16
VPS36-202ENST00000462289 LRRC4BQ9NT99 713 aa7.78□□□□□ -1.16
VPS36-202ENST00000462289 SCN11AQ9UI33 1791 aa7.78□□□□□ -1.16
VPS36-202ENST00000462289 SIPA1L3O60292 1781 aaPredicted RBP7.77□□□□□ -1.17
VPS36-202ENST00000462289 ZNF831Q5JPB2 1677 aa7.77□□□□□ -1.17
VPS36-202ENST00000462289 RREB1Q92766 1687 aa7.77□□□□□ -1.17
VPS36-202ENST00000462289 MTHFSP49914 203 aa7.77□□□□□ -1.17
VPS36-202ENST00000462289 DDX10Q13206 875 aaKnown RBP7.77□□□□□ -1.17
VPS36-202ENST00000462289 RALBP1Q15311 655 aa7.77□□□□□ -1.17
VPS36-202ENST00000462289 CC2D1BQ5T0F9 858 aaKnown RBP7.77□□□□□ -1.17
VPS36-202ENST00000462289 KANK3Q6NY19 840 aa7.77□□□□□ -1.17
VPS36-202ENST00000462289 TRERF1Q96PN7 1200 aa7.77□□□□□ -1.17
VPS36-202ENST00000462289 ZSCAN10Q96SZ4 725 aaPredicted RBP7.77□□□□□ -1.17
VPS36-202ENST00000462289 NUCKS1Q9H1E3 243 aaKnown RBP7.77□□□□□ -1.17
VPS36-202ENST00000462289 PRKRIP1Q9H875 184 aaPredicted RBP7.77□□□□□ -1.17
VPS36-202ENST00000462289 STRN4Q9NRL3 753 aa7.77□□□□□ -1.17
VPS36-202ENST00000462289 DOLKQ9UPQ8 538 aa7.77□□□□□ -1.17
VPS36-202ENST00000462289 LY75O60449 1722 aa7.77□□□□□ -1.17
VPS36-202ENST00000462289 DOT1LQ8TEK3 1739 aa7.77□□□□□ -1.17
VPS36-202ENST00000462289 CICQ96RK0 1608 aaPredicted RBP7.77□□□□□ -1.17
VPS36-202ENST00000462289 DLG5Q8TDM6 1919 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms