RNA–Protein interactions for RNA: ENST00000461862.5

SCNM1-204, Transcript of sodium channel modifier 1, humanhuman

TSL 2

Gene SCNM1, Length 1,094 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-204ENST00000461862 MEIOBQ8N635 442 aa13.17□□□□□ -0.3
SCNM1-204ENST00000461862 CCDC136Q96JN2 1154 aa13.17□□□□□ -0.3
SCNM1-204ENST00000461862 PCMTD1Q96MG8 357 aaPredicted RBP13.17□□□□□ -0.3
SCNM1-204ENST00000461862 NLRP2Q9NX02 1062 aa13.17□□□□□ -0.3
SCNM1-204ENST00000461862 SCN11AQ9UI33 1791 aa13.17□□□□□ -0.3
SCNM1-204ENST00000461862 CACNA1FO60840 1977 aa13.16□□□□□ -0.3
SCNM1-204ENST00000461862 DISP2A7MBM2 1401 aa13.16□□□□□ -0.3
SCNM1-204ENST00000461862 VAMP4O75379 141 aa13.16□□□□□ -0.3
SCNM1-204ENST00000461862 TWISTNBQ3B726 338 aaPredicted RBP13.16□□□□□ -0.3
SCNM1-204ENST00000461862 C1orf141Q5JVX7 400 aa13.16□□□□□ -0.3
SCNM1-204ENST00000461862 C20orf194Q5TEA3 1177 aa13.16□□□□□ -0.3
SCNM1-204ENST00000461862 ZKSCAN2Q63HK3 967 aa13.16□□□□□ -0.3
SCNM1-204ENST00000461862 ZNF530Q6P9A1 599 aaPredicted RBP13.16□□□□□ -0.3
SCNM1-204ENST00000461862 CCDC116Q8IYX3 515 aa13.16□□□□□ -0.3
SCNM1-204ENST00000461862 SSH1Q8WYL5 1049 aa13.16□□□□□ -0.3
SCNM1-204ENST00000461862 RAPGEF4Q8WZA2 1011 aa13.16□□□□□ -0.3
SCNM1-204ENST00000461862 MEGF6O75095 1541 aa13.15□□□□□ -0.3
SCNM1-204ENST00000461862 SOBPA7XYQ1 873 aa13.15□□□□□ -0.3
SCNM1-204ENST00000461862 IPO8O15397 1037 aaKnown RBP13.15□□□□□ -0.3
SCNM1-204ENST00000461862 TATP17735 454 aaPredicted RBP13.15□□□□□ -0.3
SCNM1-204ENST00000461862 B4GALNT3Q6L9W6 998 aa13.15□□□□□ -0.3
SCNM1-204ENST00000461862 SLC10A4Q96EP9 437 aa13.15□□□□□ -0.3
SCNM1-204ENST00000461862 TRIM34Q9BYJ4 488 aa13.15□□□□□ -0.3
SCNM1-204ENST00000461862 NXF1Q9UBU9 619 aaKnown RBP13.15□□□□□ -0.3
SCNM1-204ENST00000461862 TSPYL4Q9UJ04 414 aa13.15□□□□□ -0.3
SCNM1-204ENST00000461862 SOCS7O14512 581 aa13.14□□□□□ -0.31
SCNM1-204ENST00000461862 C6orf118Q5T5N4 469 aa13.14□□□□□ -0.31
SCNM1-204ENST00000461862 PTF1AQ7RTS3 328 aa13.14□□□□□ -0.31
SCNM1-204ENST00000461862 IL17REQ8NFR9 667 aa13.14□□□□□ -0.31
SCNM1-204ENST00000461862 FRAT1Q92837 279 aaPredicted RBP13.14□□□□□ -0.31
SCNM1-204ENST00000461862 CARD10Q9BWT7 1032 aa13.14□□□□□ -0.31
SCNM1-204ENST00000461862 BCL2L13Q9BXK5 485 aa13.14□□□□□ -0.31
SCNM1-204ENST00000461862 WNK3Q9BYP7 1800 aa13.13□□□□□ -0.31
SCNM1-204ENST00000461862 WIPF1O43516 503 aa13.13□□□□□ -0.31
SCNM1-204ENST00000461862 TAF7Q15545 349 aaPredicted RBP13.13□□□□□ -0.31
SCNM1-204ENST00000461862 ZBTB33Q86T24 672 aa13.13□□□□□ -0.31
SCNM1-204ENST00000461862 LINC00528Q8N1L1 170 aa13.13□□□□□ -0.31
SCNM1-204ENST00000461862 SPG7Q9UQ90 795 aa13.13□□□□□ -0.31
SCNM1-204ENST00000461862 MRC1P22897 1456 aa13.12□□□□□ -0.31
SCNM1-204ENST00000461862 VEGFBP49765 207 aa13.12□□□□□ -0.31
SCNM1-204ENST00000461862 PTK2Q05397 1052 aa13.12□□□□□ -0.31
SCNM1-204ENST00000461862 PPP1R26Q5T8A7 1209 aaPredicted RBP13.12□□□□□ -0.31
SCNM1-204ENST00000461862 ATF7IPQ6VMQ6 1270 aa13.12□□□□□ -0.31
SCNM1-204ENST00000461862 TSPYL6Q8N831 410 aa13.12□□□□□ -0.31
SCNM1-204ENST00000461862 C8orf58Q8NAV2 365 aa13.12□□□□□ -0.31
SCNM1-204ENST00000461862 ADAM32Q8TC27 787 aa13.12□□□□□ -0.31
SCNM1-204ENST00000461862 ARHGAP45Q92619 1136 aa13.12□□□□□ -0.31
SCNM1-204ENST00000461862 KCTD15Q96SI1 283 aaPredicted RBP13.12□□□□□ -0.31
SCNM1-204ENST00000461862 GPSM3Q9Y4H4 160 aa13.12□□□□□ -0.31
SCNM1-204ENST00000461862 TPRNQ4KMQ1 711 aa13.11□□□□□ -0.31
SCNM1-204ENST00000461862 FTSJ3Q8IY81 847 aaKnown RBP13.11□□□□□ -0.31
SCNM1-204ENST00000461862 DZIP1LQ8IYY4 767 aaKnown RBP13.11□□□□□ -0.31
SCNM1-204ENST00000461862 EP400Q96L91 3159 aa13.11□□□□□ -0.31
SCNM1-204ENST00000461862 SHANK3Q9BYB0 1731 aa13.1□□□□□ -0.31
SCNM1-204ENST00000461862 RNMTO43148 476 aaKnown RBP13.1□□□□□ -0.31
SCNM1-204ENST00000461862 HSP90AB1P08238 724 aaKnown RBP13.1□□□□□ -0.31
SCNM1-204ENST00000461862 TEFQ10587 303 aa13.1□□□□□ -0.31
SCNM1-204ENST00000461862 KRT27Q7Z3Y8 459 aa13.1□□□□□ -0.31
SCNM1-204ENST00000461862 MARCH10Q8NA82 808 aaPredicted RBP13.1□□□□□ -0.31
SCNM1-204ENST00000461862 PANK1Q8TE04 598 aa13.1□□□□□ -0.31
SCNM1-204ENST00000461862 CHMP4AQ9BY43 222 aa13.1□□□□□ -0.31
SCNM1-204ENST00000461862 NOB1Q9ULX3 412 aaKnown RBP13.1□□□□□ -0.31
SCNM1-204ENST00000461862 TRIM27P14373 513 aa13.09□□□□□ -0.31
SCNM1-204ENST00000461862 MVPQ14764 893 aaKnown RBP13.09□□□□□ -0.31
SCNM1-204ENST00000461862 INTS6LQ5JSJ4 861 aaKnown RBP13.09□□□□□ -0.31
SCNM1-204ENST00000461862 CDV3Q9UKY7 258 aaKnown RBP13.09□□□□□ -0.31
SCNM1-204ENST00000461862 N4BP2Q86UW6 1770 aaPredicted RBP13.08□□□□□ -0.32
SCNM1-204ENST00000461862 H3BM21 787 aa13.08□□□□□ -0.32
SCNM1-204ENST00000461862 HOXB7P09629 217 aa13.08□□□□□ -0.32
SCNM1-204ENST00000461862 BMP2P12643 396 aa13.08□□□□□ -0.32
SCNM1-204ENST00000461862 PHKG2P15735 406 aa13.08□□□□□ -0.32
SCNM1-204ENST00000461862 TMEM259Q4ZIN3 620 aa13.08□□□□□ -0.32
SCNM1-204ENST00000461862 NPAS3Q8IXF0 933 aa13.08□□□□□ -0.32
SCNM1-204ENST00000461862 IFNL2Q8IZJ0 200 aa13.08□□□□□ -0.32
SCNM1-204ENST00000461862 API5Q9BZZ5 524 aaKnown RBP13.08□□□□□ -0.32
SCNM1-204ENST00000461862 COG6Q9Y2V7 657 aa13.08□□□□□ -0.32
SCNM1-204ENST00000461862 KDM6AO15550 1401 aaPredicted RBP13.07□□□□□ -0.32
SCNM1-204ENST00000461862 ELL2O00472 640 aaPredicted RBP13.07□□□□□ -0.32
SCNM1-204ENST00000461862 RLBP1P12271 317 aa13.07□□□□□ -0.32
SCNM1-204ENST00000461862 CBLBQ13191 982 aa13.07□□□□□ -0.32
SCNM1-204ENST00000461862 CLUAP1Q96AJ1 413 aa13.07□□□□□ -0.32
SCNM1-204ENST00000461862 CHMP4BQ9H444 224 aaKnown RBP13.07□□□□□ -0.32
SCNM1-204ENST00000461862 DDX19BQ9UMR2 479 aa13.07□□□□□ -0.32
SCNM1-204ENST00000461862 PTPRCP08575 1304 aa13.07□□□□□ -0.32
SCNM1-204ENST00000461862 PCDH11XQ9BZA7 1347 aa13.07□□□□□ -0.32
SCNM1-204ENST00000461862 PCDH11YQ9BZA8 1340 aa13.07□□□□□ -0.32
SCNM1-204ENST00000461862 IL2RBP14784 551 aa13.06□□□□□ -0.32
SCNM1-204ENST00000461862 DDB1Q16531 1140 aa13.06□□□□□ -0.32
SCNM1-204ENST00000461862 MPRIPQ6WCQ1 1025 aa13.06□□□□□ -0.32
SCNM1-204ENST00000461862 CENPQQ7L2Z9 268 aaPredicted RBP13.06□□□□□ -0.32
SCNM1-204ENST00000461862 DEFB132Q7Z7B7 95 aa13.06□□□□□ -0.32
SCNM1-204ENST00000461862 LGR6Q9HBX8 967 aa13.06□□□□□ -0.32
SCNM1-204ENST00000461862 MIS18AQ9NYP9 233 aa13.06□□□□□ -0.32
SCNM1-204ENST00000461862 THRAP3Q9Y2W1 955 aaKnown RBP13.06□□□□□ -0.32
SCNM1-204ENST00000461862 ABCC4O15439 1325 aa13.06□□□□□ -0.32
SCNM1-204ENST00000461862 TNS2Q63HR2 1409 aa13.05□□□□□ -0.32
SCNM1-204ENST00000461862 BTBD11A6QL63 1104 aa13.05□□□□□ -0.32
SCNM1-204ENST00000461862 KRT24Q2M2I5 525 aa13.05□□□□□ -0.32
SCNM1-204ENST00000461862 CCDC30Q5VVM6 783 aa13.05□□□□□ -0.32
SCNM1-204ENST00000461862 Q6ZVU0 165 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms