RNA–Protein interactions for RNA: ENST00000461434.1

PSMD4-207, Transcript of proteasome 26S subunit, non-ATPase 4, humanhuman

TSL 2

Gene PSMD4, Length 801 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4-207ENST00000461434 F6X3S4 739 aa13.79□□□□□ -0.2
PSMD4-207ENST00000461434 H7C1D1 291 aa13.79□□□□□ -0.2
PSMD4-207ENST00000461434 TBC1D10BQ4KMP7 808 aaPredicted RBP13.79□□□□□ -0.2
PSMD4-207ENST00000461434 RBM26Q5T8P6 1007 aaKnown RBP13.79□□□□□ -0.2
PSMD4-207ENST00000461434 ZNF579Q8NAF0 562 aaKnown RBP13.79□□□□□ -0.2
PSMD4-207ENST00000461434 CDC5LQ99459 802 aaKnown RBP13.79□□□□□ -0.2
PSMD4-207ENST00000461434 TRPM7Q96QT4 1865 aa13.78□□□□□ -0.2
PSMD4-207ENST00000461434 CACNA1FO60840 1977 aa13.78□□□□□ -0.2
PSMD4-207ENST00000461434 SCN9AQ15858 1988 aa13.78□□□□□ -0.2
PSMD4-207ENST00000461434 HIRAP54198 1017 aaPredicted RBP13.78□□□□□ -0.2
PSMD4-207ENST00000461434 GCKRQ14397 625 aa13.78□□□□□ -0.2
PSMD4-207ENST00000461434 DEFB115Q30KQ5 88 aa13.78□□□□□ -0.2
PSMD4-207ENST00000461434 SAMD7Q7Z3H4 446 aa13.78□□□□□ -0.2
PSMD4-207ENST00000461434 TTLL11Q8NHH1 800 aa13.78□□□□□ -0.2
PSMD4-207ENST00000461434 MYH16Q9H6N6 1097 aa13.78□□□□□ -0.2
PSMD4-207ENST00000461434 RTL9Q8NET4 1388 aa13.78□□□□□ -0.2
PSMD4-207ENST00000461434 WTIPA6NIX2 430 aaPredicted RBP13.77□□□□□ -0.21
PSMD4-207ENST00000461434 XDHP47989 1333 aa13.77□□□□□ -0.21
PSMD4-207ENST00000461434 FAM161AQ3B820 660 aa13.77□□□□□ -0.21
PSMD4-207ENST00000461434 FBXW7Q969H0 707 aa13.77□□□□□ -0.21
PSMD4-207ENST00000461434 PODXL2Q9NZ53 605 aa13.77□□□□□ -0.21
PSMD4-207ENST00000461434 CHMP3Q9Y3E7 222 aa13.77□□□□□ -0.21
PSMD4-207ENST00000461434 H7C1W4 665 aa13.76□□□□□ -0.21
PSMD4-207ENST00000461434 CELF2O95319 508 aaKnown RBP13.76□□□□□ -0.21
PSMD4-207ENST00000461434 EGFRP00533 1210 aa13.76□□□□□ -0.21
PSMD4-207ENST00000461434 ATP2B4P23634 1241 aa13.76□□□□□ -0.21
PSMD4-207ENST00000461434 IGHMBP2P38935 993 aaKnown RBP13.76□□□□□ -0.21
PSMD4-207ENST00000461434 DLK2Q6UY11 383 aa13.76□□□□□ -0.21
PSMD4-207ENST00000461434 AIDAQ96BJ3 306 aa13.76□□□□□ -0.21
PSMD4-207ENST00000461434 WDR33Q9C0J8 1336 aaKnown RBP13.75□□□□□ -0.21
PSMD4-207ENST00000461434 ITGA6P23229 1130 aa13.75□□□□□ -0.21
PSMD4-207ENST00000461434 CST9Q5W186 159 aa13.75□□□□□ -0.21
PSMD4-207ENST00000461434 CYP4F22Q6NT55 531 aa13.75□□□□□ -0.21
PSMD4-207ENST00000461434 SLC4A10Q6U841 1118 aa13.75□□□□□ -0.21
PSMD4-207ENST00000461434 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.75□□□□□ -0.21
PSMD4-207ENST00000461434 USP48Q86UV5 1035 aa13.75□□□□□ -0.21
PSMD4-207ENST00000461434 LINS1Q8NG48 757 aa13.75□□□□□ -0.21
PSMD4-207ENST00000461434 MINPP1Q9UNW1 487 aa13.75□□□□□ -0.21
PSMD4-207ENST00000461434 RASSF10A6NK89 507 aa13.74□□□□□ -0.21
PSMD4-207ENST00000461434 FOXN1O15353 648 aa13.74□□□□□ -0.21
PSMD4-207ENST00000461434 PRKAR2AP13861 404 aaKnown RBP13.74□□□□□ -0.21
PSMD4-207ENST00000461434 TNS4Q8IZW8 715 aa13.74□□□□□ -0.21
PSMD4-207ENST00000461434 DPF2Q92785 391 aa13.74□□□□□ -0.21
PSMD4-207ENST00000461434 MPHOSPH8Q99549 860 aa13.74□□□□□ -0.21
PSMD4-207ENST00000461434 BSDC1Q9NW68 430 aaPredicted RBP13.74□□□□□ -0.21
PSMD4-207ENST00000461434 POLR2AP24928 1970 aaKnown RBP13.74□□□□□ -0.21
PSMD4-207ENST00000461434 PPP1R37O75864 691 aa13.73□□□□□ -0.21
PSMD4-207ENST00000461434 RPS12P25398 132 aaKnown RBP13.73□□□□□ -0.21
PSMD4-207ENST00000461434 CASP7P55210 303 aa13.73□□□□□ -0.21
PSMD4-207ENST00000461434 KIF4BQ2VIQ3 1234 aa13.73□□□□□ -0.21
PSMD4-207ENST00000461434 CAPNS2Q96L46 248 aa13.73□□□□□ -0.21
PSMD4-207ENST00000461434 ADM5C9JUS6 153 aa13.72□□□□□ -0.21
PSMD4-207ENST00000461434 VIL1P09327 827 aaKnown RBP13.72□□□□□ -0.21
PSMD4-207ENST00000461434 KCNJ4P48050 445 aa13.72□□□□□ -0.21
PSMD4-207ENST00000461434 CCT4P50991 539 aaKnown RBP13.72□□□□□ -0.21
PSMD4-207ENST00000461434 BEND3Q5T5X7 828 aa13.72□□□□□ -0.21
PSMD4-207ENST00000461434 RSBN1LQ6PCB5 846 aaPredicted RBP13.72□□□□□ -0.21
PSMD4-207ENST00000461434 CDC37L1Q7L3B6 337 aa13.72□□□□□ -0.21
PSMD4-207ENST00000461434 ZC3H15Q8WU90 426 aaKnown RBP13.72□□□□□ -0.21
PSMD4-207ENST00000461434 MXD3Q9BW11 206 aa13.72□□□□□ -0.21
PSMD4-207ENST00000461434 PLA2G12BQ9BX93 195 aa13.72□□□□□ -0.21
PSMD4-207ENST00000461434 ASTN2O75129 1339 aaPredicted RBP13.71□□□□□ -0.21
PSMD4-207ENST00000461434 ANKRD18BA2A2Z9 1011 aa13.71□□□□□ -0.21
PSMD4-207ENST00000461434 AOC2O75106 756 aa13.71□□□□□ -0.21
PSMD4-207ENST00000461434 KLRK1P26718 216 aa13.71□□□□□ -0.21
PSMD4-207ENST00000461434 ECE1P42892 770 aa13.71□□□□□ -0.21
PSMD4-207ENST00000461434 KRT26Q7Z3Y9 468 aa13.71□□□□□ -0.21
PSMD4-207ENST00000461434 DCPSQ96C86 337 aaKnown RBP13.71□□□□□ -0.21
PSMD4-207ENST00000461434 GGA3Q9NZ52 723 aa13.71□□□□□ -0.21
PSMD4-207ENST00000461434 PGAP2Q9UHJ9 254 aa13.71□□□□□ -0.21
PSMD4-207ENST00000461434 GTF3C3Q9Y5Q9 886 aa13.71□□□□□ -0.21
PSMD4-207ENST00000461434 TLL2Q9Y6L7 1015 aa13.71□□□□□ -0.21
PSMD4-207ENST00000461434 MED23Q9ULK4 1368 aa13.71□□□□□ -0.22
PSMD4-207ENST00000461434 PSME4Q14997 1843 aa13.7□□□□□ -0.22
PSMD4-207ENST00000461434 USP17L3A6NCW0 530 aa13.7□□□□□ -0.22
PSMD4-207ENST00000461434 USP17L4A6NCW7 530 aa13.7□□□□□ -0.22
PSMD4-207ENST00000461434 CHRNDQ07001 517 aa13.7□□□□□ -0.22
PSMD4-207ENST00000461434 TAF7LQ5H9L4 462 aa13.7□□□□□ -0.22
PSMD4-207ENST00000461434 USP17L1Q7RTZ2 530 aa13.7□□□□□ -0.22
PSMD4-207ENST00000461434 IFNL1Q8IU54 200 aa13.7□□□□□ -0.22
PSMD4-207ENST00000461434 HELBQ8NG08 1087 aaPredicted RBP13.7□□□□□ -0.22
PSMD4-207ENST00000461434 C9orf78Q9NZ63 289 aaPredicted RBP13.7□□□□□ -0.22
PSMD4-207ENST00000461434 SCAF8Q9UPN6 1271 aaKnown RBP13.7□□□□□ -0.22
PSMD4-207ENST00000461434 ZNF804BA4D1E1 1349 aa13.69□□□□□ -0.22
PSMD4-207ENST00000461434 ZNF521Q96K83 1311 aa13.69□□□□□ -0.22
PSMD4-207ENST00000461434 SNAP23O00161 211 aa13.69□□□□□ -0.22
PSMD4-207ENST00000461434 GRM8O00222 908 aa13.69□□□□□ -0.22
PSMD4-207ENST00000461434 PLIN1O60240 522 aa13.69□□□□□ -0.22
PSMD4-207ENST00000461434 TAF5LO75529 589 aa13.69□□□□□ -0.22
PSMD4-207ENST00000461434 CSF1RP07333 972 aa13.69□□□□□ -0.22
PSMD4-207ENST00000461434 CTCFP49711 727 aaPredicted RBP13.69□□□□□ -0.22
PSMD4-207ENST00000461434 LBX1P52954 281 aa13.69□□□□□ -0.22
PSMD4-207ENST00000461434 FOXO4P98177 505 aa13.69□□□□□ -0.22
PSMD4-207ENST00000461434 IFIT5Q13325 482 aaKnown RBP13.69□□□□□ -0.22
PSMD4-207ENST00000461434 EPHA10Q5JZY3 1008 aa13.69□□□□□ -0.22
PSMD4-207ENST00000461434 LMBR1LQ6UX01 489 aa13.69□□□□□ -0.22
PSMD4-207ENST00000461434 TXNRD3Q86VQ6 643 aa13.69□□□□□ -0.22
PSMD4-207ENST00000461434 EFCAB3Q8N7B9 438 aa13.69□□□□□ -0.22
PSMD4-207ENST00000461434 ZNF594Q96JF6 807 aaPredicted RBP13.69□□□□□ -0.22
PSMD4-207ENST00000461434 ANKRD2Q9GZV1 360 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms