RNA–Protein interactions for RNA: ENST00000461350.5

COPS7B-217, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 2

Gene COPS7B, Length 3,299 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-217ENST00000461350 LY75O60449 1722 aa13.33□□□□□ -0.27
COPS7B-217ENST00000461350 ERFEQ4G0M1 354 aa13.33□□□□□ -0.27
COPS7B-217ENST00000461350 DDX46Q7L014 1031 aaKnown RBP13.33□□□□□ -0.27
COPS7B-217ENST00000461350 RIPOR2Q9Y4F9 1068 aa13.33□□□□□ -0.27
COPS7B-217ENST00000461350 BCORQ6W2J9 1755 aa13.33□□□□□ -0.28
COPS7B-217ENST00000461350 ZNF609O15014 1411 aa13.33□□□□□ -0.28
COPS7B-217ENST00000461350 ZPR1O75312 459 aa13.33□□□□□ -0.28
COPS7B-217ENST00000461350 PLCB2Q00722 1185 aa13.33□□□□□ -0.28
COPS7B-217ENST00000461350 CLEC4GQ6UXB4 293 aa13.33□□□□□ -0.28
COPS7B-217ENST00000461350 C3orf67Q6ZVT6 689 aa13.33□□□□□ -0.28
COPS7B-217ENST00000461350 NARFQ9UHQ1 456 aa13.33□□□□□ -0.28
COPS7B-217ENST00000461350 NMIQ13287 307 aaPredicted RBP13.32□□□□□ -0.28
COPS7B-217ENST00000461350 AK7Q96M32 723 aa13.32□□□□□ -0.28
COPS7B-217ENST00000461350 RIC1Q4ADV7 1423 aa13.32□□□□□ -0.28
COPS7B-217ENST00000461350 SNAP23O00161 211 aa13.32□□□□□ -0.28
COPS7B-217ENST00000461350 GPR108Q9NPR9 543 aa13.32□□□□□ -0.28
COPS7B-217ENST00000461350 GTF2E1P29083 439 aaPredicted RBP13.31□□□□□ -0.28
COPS7B-217ENST00000461350 RBM6P78332 1123 aaKnown RBP13.31□□□□□ -0.28
COPS7B-217ENST00000461350 GORABQ5T7V8 394 aa13.31□□□□□ -0.28
COPS7B-217ENST00000461350 XAGE2Q96GT9 111 aa13.31□□□□□ -0.28
COPS7B-217ENST00000461350 SNRKQ9NRH2 765 aa13.31□□□□□ -0.28
COPS7B-217ENST00000461350 DDX60Q8IY21 1712 aaKnown RBP13.31□□□□□ -0.28
COPS7B-217ENST00000461350 A0A0D9SFI3 127 aa13.31□□□□□ -0.28
COPS7B-217ENST00000461350 SLFNL1Q499Z3 407 aa13.31□□□□□ -0.28
COPS7B-217ENST00000461350 FAM184AQ8NB25 1140 aa13.31□□□□□ -0.28
COPS7B-217ENST00000461350 C4BP0C0L5 1744 aa13.31□□□□□ -0.28
COPS7B-217ENST00000461350 GOLIM4O00461 696 aa13.31□□□□□ -0.28
COPS7B-217ENST00000461350 RFC4P35249 363 aa13.31□□□□□ -0.28
COPS7B-217ENST00000461350 ZNF772Q68DY9 489 aaPredicted RBP13.31□□□□□ -0.28
COPS7B-217ENST00000461350 HAUS7Q99871 368 aa13.31□□□□□ -0.28
COPS7B-217ENST00000461350 TAF1P21675 1872 aa13.3□□□□□ -0.28
COPS7B-217ENST00000461350 PTH1RQ03431 593 aa13.3□□□□□ -0.28
COPS7B-217ENST00000461350 SETDB2Q96T68 719 aa13.3□□□□□ -0.28
COPS7B-217ENST00000461350 LSG1Q9H089 658 aaKnown RBP13.3□□□□□ -0.28
COPS7B-217ENST00000461350 TTC12Q9H892 705 aaPredicted RBP13.3□□□□□ -0.28
COPS7B-217ENST00000461350 CNPY2Q9Y2B0 182 aa13.3□□□□□ -0.28
COPS7B-217ENST00000461350 TAF5LO75529 589 aa13.3□□□□□ -0.28
COPS7B-217ENST00000461350 ADCY5O95622 1261 aa13.3□□□□□ -0.28
COPS7B-217ENST00000461350 ATP2B3Q16720 1220 aa13.3□□□□□ -0.28
COPS7B-217ENST00000461350 TRAPPC3LQ5T215 181 aa13.3□□□□□ -0.28
COPS7B-217ENST00000461350 IFIT1P09914 478 aaKnown RBP13.3□□□□□ -0.28
COPS7B-217ENST00000461350 CCDC152Q4G0S7 254 aa13.3□□□□□ -0.28
COPS7B-217ENST00000461350 CCDC183Q5T5S1 534 aa13.3□□□□□ -0.28
COPS7B-217ENST00000461350 FBXO3Q9UK99 471 aa13.3□□□□□ -0.28
COPS7B-217ENST00000461350 AKAP2Q9Y2D5 859 aa13.3□□□□□ -0.28
COPS7B-217ENST00000461350 FKBP4Q02790 459 aaKnown RBP eCLIP13.29□□□□□ -0.28
COPS7B-217ENST00000461350 SCARF1Q14162 830 aa13.29□□□□□ -0.28
COPS7B-217ENST00000461350 PI16Q6UXB8 463 aa13.29□□□□□ -0.28
COPS7B-217ENST00000461350 C17orf53Q8N3J3 647 aaPredicted RBP13.29□□□□□ -0.28
COPS7B-217ENST00000461350 MPHOSPH8Q99549 860 aa13.29□□□□□ -0.28
COPS7B-217ENST00000461350 LARP6Q9BRS8 491 aaKnown RBP13.29□□□□□ -0.28
COPS7B-217ENST00000461350 COL4A1P02462 1669 aa13.29□□□□□ -0.28
COPS7B-217ENST00000461350 SPEF2Q9C093 1822 aa13.29□□□□□ -0.28
COPS7B-217ENST00000461350 ABCC12Q96J65 1359 aa13.29□□□□□ -0.28
COPS7B-217ENST00000461350 SCN7AQ01118 1682 aa13.29□□□□□ -0.28
COPS7B-217ENST00000461350 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.29□□□□□ -0.28
COPS7B-217ENST00000461350 UVSSAQ2YD98 709 aa13.29□□□□□ -0.28
COPS7B-217ENST00000461350 NBPF5PQ86XG9 351 aaPredicted RBP13.29□□□□□ -0.28
COPS7B-217ENST00000461350 VGLL2Q8N8G2 317 aa13.29□□□□□ -0.28
COPS7B-217ENST00000461350 RUFY2Q8WXA3 655 aa13.29□□□□□ -0.28
COPS7B-217ENST00000461350 TSC1Q92574 1164 aa13.29□□□□□ -0.28
COPS7B-217ENST00000461350 SEC62Q99442 399 aaKnown RBP13.29□□□□□ -0.28
COPS7B-217ENST00000461350 RAD50Q92878 1312 aa13.28□□□□□ -0.28
COPS7B-217ENST00000461350 FIBPO43427 364 aa13.28□□□□□ -0.28
COPS7B-217ENST00000461350 NOLC1Q14978 699 aaKnown RBP eCLIP13.28□□□□□ -0.28
COPS7B-217ENST00000461350 TTC39AQ5SRH9 613 aa13.28□□□□□ -0.28
COPS7B-217ENST00000461350 MYRIPQ8NFW9 859 aa13.28□□□□□ -0.28
COPS7B-217ENST00000461350 PAG1Q9NWQ8 432 aa13.28□□□□□ -0.28
COPS7B-217ENST00000461350 ZNF589Q86UQ0 364 aaPredicted RBP13.28□□□□□ -0.28
COPS7B-217ENST00000461350 PROM2Q8N271 834 aa13.28□□□□□ -0.28
COPS7B-217ENST00000461350 PRDM10Q9NQV6 1147 aa13.28□□□□□ -0.28
COPS7B-217ENST00000461350 PDE8BO95263 885 aa13.28□□□□□ -0.28
COPS7B-217ENST00000461350 CCDC158Q5M9N0 1113 aa13.28□□□□□ -0.28
COPS7B-217ENST00000461350 PIBF1Q8WXW3 757 aa13.28□□□□□ -0.28
COPS7B-217ENST00000461350 TCHHQ07283 1943 aa13.27□□□□□ -0.28
COPS7B-217ENST00000461350 NPHP1O15259 732 aa13.27□□□□□ -0.28
COPS7B-217ENST00000461350 CCDC129Q6ZRS4 1044 aa13.27□□□□□ -0.28
COPS7B-217ENST00000461350 RASEFQ8IZ41 740 aa13.27□□□□□ -0.28
COPS7B-217ENST00000461350 C4AP0C0L4 1744 aa13.27□□□□□ -0.28
COPS7B-217ENST00000461350 ZSCAN22P10073 491 aaPredicted RBP13.26□□□□□ -0.29
COPS7B-217ENST00000461350 RXRBP28702 533 aa13.26□□□□□ -0.29
COPS7B-217ENST00000461350 HSPA4P34932 840 aa13.26□□□□□ -0.29
COPS7B-217ENST00000461350 TXNRD1Q16881 649 aa13.26□□□□□ -0.29
COPS7B-217ENST00000461350 WTIPA6NIX2 430 aaPredicted RBP13.26□□□□□ -0.29
COPS7B-217ENST00000461350 HIP1O00291 1037 aa13.26□□□□□ -0.29
COPS7B-217ENST00000461350 IGHMBP2P38935 993 aaKnown RBP13.26□□□□□ -0.29
COPS7B-217ENST00000461350 HMGN5P82970 282 aaKnown RBP13.26□□□□□ -0.29
COPS7B-217ENST00000461350 KBTBD3Q8NAB2 608 aa13.26□□□□□ -0.29
COPS7B-217ENST00000461350 PRIMPOLQ96LW4 560 aa13.26□□□□□ -0.29
COPS7B-217ENST00000461350 SMC3Q9UQE7 1217 aa13.26□□□□□ -0.29
COPS7B-217ENST00000461350 CCDC171Q6TFL3 1326 aa13.25□□□□□ -0.29
COPS7B-217ENST00000461350 STX6O43752 255 aa13.25□□□□□ -0.29
COPS7B-217ENST00000461350 LETM1O95202 739 aaPredicted RBP13.25□□□□□ -0.29
COPS7B-217ENST00000461350 ZAP70P43403 619 aa13.25□□□□□ -0.29
COPS7B-217ENST00000461350 PHKA1P46020 1223 aa13.25□□□□□ -0.29
COPS7B-217ENST00000461350 UBE2HP62256 183 aa13.25□□□□□ -0.29
COPS7B-217ENST00000461350 NFIXQ14938 502 aa13.25□□□□□ -0.29
COPS7B-217ENST00000461350 PRPF40BQ6NWY9 871 aaKnown RBP13.25□□□□□ -0.29
COPS7B-217ENST00000461350 RPAP1Q9BWH6 1393 aaPredicted RBP13.25□□□□□ -0.29
COPS7B-217ENST00000461350 DTNBO60941 627 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms