RNA–Protein interactions for RNA: ENST00000460801.5

PTPRN-210, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 2

Gene PTPRN, Length 2,239 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-210ENST00000460801 NSFL1CQ9UNZ2 370 aaKnown RBP16.57■□□□□ 0.24
PTPRN-210ENST00000460801 MTMR6Q9Y217 621 aa16.57■□□□□ 0.24
PTPRN-210ENST00000460801 LAMA4Q16363 1823 aa16.56■□□□□ 0.24
PTPRN-210ENST00000460801 MCAMP43121 646 aa16.56■□□□□ 0.24
PTPRN-210ENST00000460801 MYH7P12883 1935 aa16.56■□□□□ 0.24
PTPRN-210ENST00000460801 MROH5Q6ZUA9 1318 aa16.56■□□□□ 0.24
PTPRN-210ENST00000460801 FGFR2P21802 821 aa16.55■□□□□ 0.24
PTPRN-210ENST00000460801 PI16Q6UXB8 463 aa16.55■□□□□ 0.24
PTPRN-210ENST00000460801 Q6ZUG5 572 aa16.55■□□□□ 0.24
PTPRN-210ENST00000460801 NGLY1Q96IV0 654 aa16.55■□□□□ 0.24
PTPRN-210ENST00000460801 ATP6V1DQ9Y5K8 247 aa16.55■□□□□ 0.24
PTPRN-210ENST00000460801 UBAP1LF5GYI3 381 aa16.55■□□□□ 0.24
PTPRN-210ENST00000460801 NTSR2O95665 410 aa16.55■□□□□ 0.24
PTPRN-210ENST00000460801 APPBP2Q92624 585 aa16.55■□□□□ 0.24
PTPRN-210ENST00000460801 C8orf37Q96NL8 207 aa16.55■□□□□ 0.24
PTPRN-210ENST00000460801 DDX60Q8IY21 1712 aaKnown RBP16.55■□□□□ 0.24
PTPRN-210ENST00000460801 PUM3Q15397 648 aaKnown RBP16.54■□□□□ 0.24
PTPRN-210ENST00000460801 FOXD4L6Q3SYB3 417 aaPredicted RBP16.54■□□□□ 0.24
PTPRN-210ENST00000460801 FOXD4L3Q6VB84 417 aaPredicted RBP16.54■□□□□ 0.24
PTPRN-210ENST00000460801 DHX32Q7L7V1 743 aaKnown RBP16.54■□□□□ 0.24
PTPRN-210ENST00000460801 USP48Q86UV5 1035 aa16.54■□□□□ 0.24
PTPRN-210ENST00000460801 TMEM63CQ9P1W3 806 aa16.54■□□□□ 0.24
PTPRN-210ENST00000460801 RBM27Q9P2N5 1060 aaKnown RBP16.54■□□□□ 0.24
PTPRN-210ENST00000460801 NIP7Q9Y221 180 aaKnown RBP eCLIP16.54■□□□□ 0.24
PTPRN-210ENST00000460801 FAM177BA6PVY3 158 aa16.54■□□□□ 0.24
PTPRN-210ENST00000460801 FOXP2O15409 715 aa16.54■□□□□ 0.24
PTPRN-210ENST00000460801 DTNBO60941 627 aa16.54■□□□□ 0.24
PTPRN-210ENST00000460801 HSP90B1P14625 803 aaKnown RBP16.54■□□□□ 0.24
PTPRN-210ENST00000460801 ARID4AP29374 1257 aaPredicted RBP16.54■□□□□ 0.24
PTPRN-210ENST00000460801 EXOSC10Q01780 885 aaKnown RBP16.54■□□□□ 0.24
PTPRN-210ENST00000460801 WASHC4Q2M389 1173 aa16.54■□□□□ 0.24
PTPRN-210ENST00000460801 FNBP4Q8N3X1 1017 aaPredicted RBP16.54■□□□□ 0.24
PTPRN-210ENST00000460801 LPIN2Q92539 896 aa16.54■□□□□ 0.24
PTPRN-210ENST00000460801 RTL9Q8NET4 1388 aa16.54■□□□□ 0.24
PTPRN-210ENST00000460801 ARAP2Q8WZ64 1704 aa16.54■□□□□ 0.24
PTPRN-210ENST00000460801 BCORQ6W2J9 1755 aa16.53■□□□□ 0.24
PTPRN-210ENST00000460801 E7EWF7 191 aa16.53■□□□□ 0.24
PTPRN-210ENST00000460801 CCDC102BQ68D86 513 aa16.53■□□□□ 0.24
PTPRN-210ENST00000460801 CLEC4GQ6UXB4 293 aa16.53■□□□□ 0.24
PTPRN-210ENST00000460801 GTF3C6Q969F1 213 aa16.53■□□□□ 0.24
PTPRN-210ENST00000460801 GDPD2Q9HCC8 539 aa16.53■□□□□ 0.24
PTPRN-210ENST00000460801 LAMB2P55268 1798 aa16.53■□□□□ 0.24
PTPRN-210ENST00000460801 A0A0G2JLW4 131 aa16.53■□□□□ 0.24
PTPRN-210ENST00000460801 PDCP20941 246 aa16.53■□□□□ 0.24
PTPRN-210ENST00000460801 TTF1Q15361 905 aaPredicted RBP16.53■□□□□ 0.24
PTPRN-210ENST00000460801 LARP1BQ659C4 914 aaKnown RBP16.53■□□□□ 0.24
PTPRN-210ENST00000460801 LINC00116Q8NCU8 138 aa16.53■□□□□ 0.24
PTPRN-210ENST00000460801 AGXT2Q9BYV1 514 aa16.53■□□□□ 0.24
PTPRN-210ENST00000460801 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.53■□□□□ 0.24
PTPRN-210ENST00000460801 PUS7LQ9H0K6 701 aaKnown RBP16.53■□□□□ 0.24
PTPRN-210ENST00000460801 CNPY2Q9Y2B0 182 aa16.53■□□□□ 0.24
PTPRN-210ENST00000460801 ZNF652Q9Y2D9 606 aa16.53■□□□□ 0.24
PTPRN-210ENST00000460801 UQCRFS1P1P0C7P4 283 aa16.52■□□□□ 0.24
PTPRN-210ENST00000460801 PHKA1P46020 1223 aa16.52■□□□□ 0.24
PTPRN-210ENST00000460801 CCDC152Q4G0S7 254 aa16.52■□□□□ 0.24
PTPRN-210ENST00000460801 SEC31BQ9NQW1 1179 aa16.52■□□□□ 0.24
PTPRN-210ENST00000460801 CTNNA3Q9UI47 895 aa16.52■□□□□ 0.24
PTPRN-210ENST00000460801 GADD45BO75293 160 aaPredicted RBP16.51■□□□□ 0.23
PTPRN-210ENST00000460801 STK3Q13188 491 aa16.51■□□□□ 0.23
PTPRN-210ENST00000460801 ZSCAN25Q6NSZ9 544 aa16.51■□□□□ 0.23
PTPRN-210ENST00000460801 HELBQ8NG08 1087 aaPredicted RBP16.51■□□□□ 0.23
PTPRN-210ENST00000460801 BRF1Q92994 677 aa16.51■□□□□ 0.23
PTPRN-210ENST00000460801 ADD2P35612 726 aa16.51■□□□□ 0.23
PTPRN-210ENST00000460801 TTLL5Q6EMB2 1281 aa16.51■□□□□ 0.23
PTPRN-210ENST00000460801 MPHOSPH8Q99549 860 aa16.51■□□□□ 0.23
PTPRN-210ENST00000460801 VPS37CA5D8V6 355 aaPredicted RBP16.5■□□□□ 0.23
PTPRN-210ENST00000460801 LRRC2Q9BYS8 371 aa16.5■□□□□ 0.23
PTPRN-210ENST00000460801 PIH1D3Q9NQM4 214 aaKnown RBP16.5■□□□□ 0.23
PTPRN-210ENST00000460801 ATRNO75882 1429 aa16.5■□□□□ 0.23
PTPRN-210ENST00000460801 MYO5AQ9Y4I1 1855 aaKnown RBP16.5■□□□□ 0.23
PTPRN-210ENST00000460801 CNTNAP4Q9C0A0 1308 aa16.5■□□□□ 0.23
PTPRN-210ENST00000460801 RGL2O15211 777 aa16.5■□□□□ 0.23
PTPRN-210ENST00000460801 FGAP02671 866 aa16.5■□□□□ 0.23
PTPRN-210ENST00000460801 SLC5A1P13866 664 aa16.5■□□□□ 0.23
PTPRN-210ENST00000460801 UBE3CQ15386 1083 aa16.5■□□□□ 0.23
PTPRN-210ENST00000460801 GPAA1O43292 621 aa16.49■□□□□ 0.23
PTPRN-210ENST00000460801 PFKFB2O60825 505 aa16.49■□□□□ 0.23
PTPRN-210ENST00000460801 SLC9C2Q5TAH2 1124 aa16.49■□□□□ 0.23
PTPRN-210ENST00000460801 FBXL16Q8N461 479 aa16.49■□□□□ 0.23
PTPRN-210ENST00000460801 IGHMBP2P38935 993 aaKnown RBP16.49■□□□□ 0.23
PTPRN-210ENST00000460801 FGD1P98174 961 aa16.49■□□□□ 0.23
PTPRN-210ENST00000460801 IMMTQ16891 758 aaKnown RBP16.49■□□□□ 0.23
PTPRN-210ENST00000460801 DNM1Q05193 864 aaKnown RBP16.48■□□□□ 0.23
PTPRN-210ENST00000460801 SCRN1Q12765 414 aa16.48■□□□□ 0.23
PTPRN-210ENST00000460801 LRSAM1Q6UWE0 723 aa16.48■□□□□ 0.23
PTPRN-210ENST00000460801 CDC37L1Q7L3B6 337 aa16.48■□□□□ 0.23
PTPRN-210ENST00000460801 PTF1AQ7RTS3 328 aa16.48■□□□□ 0.23
PTPRN-210ENST00000460801 LLPHQ9BRT6 129 aaKnown RBP16.48■□□□□ 0.23
PTPRN-210ENST00000460801 SYAP1Q96A49 352 aaPredicted RBP16.47■□□□□ 0.23
PTPRN-210ENST00000460801 SPATA31A6Q5VVP1 1343 aa16.47■□□□□ 0.23
PTPRN-210ENST00000460801 JAK2O60674 1132 aa16.47■□□□□ 0.23
PTPRN-210ENST00000460801 KCNQ4P56696 695 aa16.47■□□□□ 0.23
PTPRN-210ENST00000460801 UBE2HP62256 183 aa16.47■□□□□ 0.23
PTPRN-210ENST00000460801 CSPP1Q1MSJ5 1256 aa16.47■□□□□ 0.23
PTPRN-210ENST00000460801 RC3H1Q5TC82 1133 aaKnown RBP16.47■□□□□ 0.23
PTPRN-210ENST00000460801 SPATA5Q8NB90 893 aa16.47■□□□□ 0.23
PTPRN-210ENST00000460801 SMARCC2Q8TAQ2 1214 aa16.47■□□□□ 0.23
PTPRN-210ENST00000460801 USP21Q9UK80 565 aa16.47■□□□□ 0.23
PTPRN-210ENST00000460801 THSD7AQ9UPZ6 1657 aa16.47■□□□□ 0.23
PTPRN-210ENST00000460801 TCRBV5S4A2TA0A5A2 114 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms